RNA–Protein interactions for RNA: ENST00000448572.1

SSBP3-209, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-209ENST00000448572 SLC25A20O43772 301 aa5.84□□□□□ -1.47
SSBP3-209ENST00000448572 ATP6V1G1O75348 118 aa5.84□□□□□ -1.47
SSBP3-209ENST00000448572 CFC1BP0CG36 223 aa5.84□□□□□ -1.47
SSBP3-209ENST00000448572 TRAV9-1A0A075B6T8 112 aa5.83□□□□□ -1.48
SSBP3-209ENST00000448572 IGLV5-39A0A0G2JS06 123 aa5.83□□□□□ -1.48
SSBP3-209ENST00000448572 PRYO14603 147 aa5.83□□□□□ -1.48
SSBP3-209ENST00000448572 SCO1O75880 301 aa5.83□□□□□ -1.48
SSBP3-209ENST00000448572 FA2HQ7L5A8 372 aa5.83□□□□□ -1.48
SSBP3-209ENST00000448572 hCG_2014768A0A024R1R8 64 aa5.82□□□□□ -1.48
SSBP3-209ENST00000448572 ETDCA0A1B0GVM5 59 aa5.82□□□□□ -1.48
SSBP3-209ENST00000448572 COX19Q49B96 90 aa5.82□□□□□ -1.48
SSBP3-209ENST00000448572 SSBP3-AS1Q7Z2R9 100 aa5.82□□□□□ -1.48
SSBP3-209ENST00000448572 MUC17Q685J3 4493 aa5.82□□□□□ -1.48
SSBP3-209ENST00000448572 LINC00587B1AMM8 73 aa5.81□□□□□ -1.48
SSBP3-209ENST00000448572 IGLC3P0DOY3 106 aa5.81□□□□□ -1.48
SSBP3-209ENST00000448572 ADCYAP1P18509 176 aa5.81□□□□□ -1.48
SSBP3-209ENST00000448572 LINC00158P58513 81 aa5.81□□□□□ -1.48
SSBP3-209ENST00000448572 LINC01546A6NGU7 62 aa5.8□□□□□ -1.48
SSBP3-209ENST00000448572 S100PP25815 95 aa5.8□□□□□ -1.48
SSBP3-209ENST00000448572 NDUFA6P56556 154 aa5.8□□□□□ -1.48
SSBP3-209ENST00000448572 ZNF625Q96I27 306 aaPredicted RBP5.79□□□□□ -1.48
SSBP3-209ENST00000448572 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
SSBP3-209ENST00000448572 KIAA1644Q3SXP7 199 aa5.78□□□□□ -1.48
SSBP3-209ENST00000448572 LINC00483Q53H64 154 aa5.78□□□□□ -1.48
SSBP3-209ENST00000448572 TMEM170BQ5T4T1 132 aa5.78□□□□□ -1.48
SSBP3-209ENST00000448572 XP32Q5T750 250 aa5.78□□□□□ -1.48
SSBP3-209ENST00000448572 SMCR5Q8TEV8 140 aa5.78□□□□□ -1.48
SSBP3-209ENST00000448572 ZNF22P17026 224 aaPredicted RBP5.77□□□□□ -1.49
SSBP3-209ENST00000448572 MAP1LC3CQ9BXW4 147 aa5.77□□□□□ -1.49
SSBP3-209ENST00000448572 KCNQ1DNQ9H478 68 aa5.77□□□□□ -1.49
SSBP3-209ENST00000448572 SPRR1AP35321 89 aa5.76□□□□□ -1.49
SSBP3-209ENST00000448572 MOBPQ13875 183 aa5.76□□□□□ -1.49
SSBP3-209ENST00000448572 GAGE2AQ6NT46 116 aa5.76□□□□□ -1.49
SSBP3-209ENST00000448572 BOD1L2Q8IYS8 172 aa5.76□□□□□ -1.49
SSBP3-209ENST00000448572 Q8N377 158 aa5.76□□□□□ -1.49
SSBP3-209ENST00000448572 IGLV9-49A0A0B4J1Y8 123 aa5.75□□□□□ -1.49
SSBP3-209ENST00000448572 HERV-K104P63124 156 aa5.75□□□□□ -1.49
SSBP3-209ENST00000448572 JOSD1Q15040 202 aaPredicted RBP5.75□□□□□ -1.49
SSBP3-209ENST00000448572 MEIG1Q5JSS6 88 aa5.75□□□□□ -1.49
SSBP3-209ENST00000448572 HBDP02042 147 aa5.74□□□□□ -1.49
SSBP3-209ENST00000448572 BAGE3Q86Y29 109 aa5.74□□□□□ -1.49
SSBP3-209ENST00000448572 LIMD2Q9BT23 127 aa5.74□□□□□ -1.49
SSBP3-209ENST00000448572 CBY1Q9Y3M2 126 aa5.74□□□□□ -1.49
SSBP3-209ENST00000448572 FABP9Q0Z7S8 132 aa5.73□□□□□ -1.49
SSBP3-209ENST00000448572 SEC11CQ9BY50 192 aa5.73□□□□□ -1.49
SSBP3-209ENST00000448572 NCR3O14931 201 aa5.72□□□□□ -1.49
SSBP3-209ENST00000448572 LINC00614P0C842 121 aa5.72□□□□□ -1.49
SSBP3-209ENST00000448572 C9orf153Q5TBE3 101 aa5.72□□□□□ -1.49
SSBP3-209ENST00000448572 SLC25A34Q6PIV7 304 aa5.72□□□□□ -1.49
SSBP3-209ENST00000448572 A0A0U1RRA0 63 aa5.71□□□□□ -1.5
SSBP3-209ENST00000448572 C5orf52A6NGY3 159 aa5.71□□□□□ -1.5
SSBP3-209ENST00000448572 C11orf86A6NJI1 115 aa5.71□□□□□ -1.5
SSBP3-209ENST00000448572 Q8NDZ9 215 aa5.71□□□□□ -1.5
SSBP3-209ENST00000448572 MIEN1Q9BRT3 115 aa5.71□□□□□ -1.5
SSBP3-209ENST00000448572 KRTAP4-1Q9BYQ7 146 aa5.71□□□□□ -1.5
SSBP3-209ENST00000448572 CHTOPQ9Y3Y2 248 aaKnown RBP5.71□□□□□ -1.5
SSBP3-209ENST00000448572 TRBV10-3A0A0K0K1G6 114 aa5.7□□□□□ -1.5
SSBP3-209ENST00000448572 TRBV10-2A0A0K0K1G8 114 aa5.7□□□□□ -1.5
SSBP3-209ENST00000448572 MYMXA0A1B0GTQ4 84 aa5.7□□□□□ -1.5
SSBP3-209ENST00000448572 KRTAP4-16G5E9R7 235 aaPredicted RBP5.7□□□□□ -1.5
SSBP3-209ENST00000448572 HINT1P49773 126 aaPredicted RBP5.7□□□□□ -1.5
SSBP3-209ENST00000448572 IFITM2Q01629 132 aa5.7□□□□□ -1.5
SSBP3-209ENST00000448572 Q6ZRX8 168 aa5.7□□□□□ -1.5
SSBP3-209ENST00000448572 COMMD7Q86VX2 200 aa5.7□□□□□ -1.5
SSBP3-209ENST00000448572 MIR7-3HGQ8N6C7 128 aa5.7□□□□□ -1.5
SSBP3-209ENST00000448572 IGLV8-61A0A075B6I0 122 aa5.69□□□□□ -1.5
SSBP3-209ENST00000448572 B5MCH6 92 aa5.69□□□□□ -1.5
SSBP3-209ENST00000448572 SMIM13P0DJ93 91 aa5.69□□□□□ -1.5
SSBP3-209ENST00000448572 DDTP30046 118 aa5.69□□□□□ -1.5
SSBP3-209ENST00000448572 UQCC3Q6UW78 93 aa5.69□□□□□ -1.5
SSBP3-209ENST00000448572 TMEM223A0PJW6 202 aa5.68□□□□□ -1.5
SSBP3-209ENST00000448572 M0R2T5 61 aa5.68□□□□□ -1.5
SSBP3-209ENST00000448572 S100A7L2Q5SY68 101 aa5.68□□□□□ -1.5
SSBP3-209ENST00000448572 TRAV12-1A0A0B4J245 112 aa5.67□□□□□ -1.5
SSBP3-209ENST00000448572 MT1HP80294 61 aa5.67□□□□□ -1.5
SSBP3-209ENST00000448572 SPANXB1Q9NS25 103 aaPredicted RBP5.67□□□□□ -1.5
SSBP3-209ENST00000448572 PCOTHQ58A44 107 aa5.66□□□□□ -1.5
SSBP3-209ENST00000448572 A0A096LNJ9 63 aa5.65□□□□□ -1.5
SSBP3-209ENST00000448572 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
SSBP3-209ENST00000448572 COX6B2Q6YFQ2 88 aa5.65□□□□□ -1.5
SSBP3-209ENST00000448572 C18orf32Q8TCD1 76 aa5.65□□□□□ -1.5
SSBP3-209ENST00000448572 LOC107984156A0A0G2JMH3 177 aa5.64□□□□□ -1.51
SSBP3-209ENST00000448572 TMEM218A2RU14 115 aa5.64□□□□□ -1.51
SSBP3-209ENST00000448572 NDUFC2O95298 119 aa5.64□□□□□ -1.51
SSBP3-209ENST00000448572 ARL17AQ8IVW1 177 aa5.64□□□□□ -1.51
SSBP3-209ENST00000448572 TRAPPC1Q9Y5R8 145 aa5.64□□□□□ -1.51
SSBP3-209ENST00000448572 TRAV23DV6A0A075B6W5 121 aa5.63□□□□□ -1.51
SSBP3-209ENST00000448572 ERC2-IT1O76042 136 aa5.63□□□□□ -1.51
SSBP3-209ENST00000448572 RHEBQ15382 184 aa5.63□□□□□ -1.51
SSBP3-209ENST00000448572 CLLU1Q5K131 121 aa5.63□□□□□ -1.51
SSBP3-209ENST00000448572 IFI27L1Q96BM0 104 aa5.63□□□□□ -1.51
SSBP3-209ENST00000448572 Q9BRP9 147 aa5.63□□□□□ -1.51
SSBP3-209ENST00000448572 LAMTOR3Q9UHA4 124 aa5.63□□□□□ -1.51
SSBP3-209ENST00000448572 IGLV6-57P01721 117 aa5.62□□□□□ -1.51
SSBP3-209ENST00000448572 NMUP48645 174 aa5.62□□□□□ -1.51
SSBP3-209ENST00000448572 PMCHL1Q16048 86 aa5.62□□□□□ -1.51
SSBP3-209ENST00000448572 CHCHD1Q96BP2 118 aaKnown RBP5.62□□□□□ -1.51
SSBP3-209ENST00000448572 ZNF73O43830 326 aaPredicted RBP5.61□□□□□ -1.51
SSBP3-209ENST00000448572 LORP23490 312 aaPredicted RBP5.61□□□□□ -1.51
SSBP3-209ENST00000448572 KRTAP10-6P60371 365 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms