RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 BAGE3Q86Y29 109 aa16.37■□□□□ 0.21
CBX4-202ENST00000448310 PLEKHB2Q96CS7 222 aa16.35■□□□□ 0.21
CBX4-202ENST00000448310 C3orf22Q8N5N4 141 aa16.34■□□□□ 0.21
CBX4-202ENST00000448310 MUC17Q685J3 4493 aa16.34■□□□□ 0.21
CBX4-202ENST00000448310 CBLN2Q8IUK8 224 aa16.33■□□□□ 0.2
CBX4-202ENST00000448310 FAT4Q6V0I7 4981 aa16.33■□□□□ 0.2
CBX4-202ENST00000448310 HIGD2AQ9BW72 106 aa16.31■□□□□ 0.2
CBX4-202ENST00000448310 A0A0U1RRA0 63 aa16.3■□□□□ 0.2
CBX4-202ENST00000448310 LINC00158P58513 81 aa16.3■□□□□ 0.2
CBX4-202ENST00000448310 SFTA2Q6UW10 78 aa16.3■□□□□ 0.2
CBX4-202ENST00000448310 CHTOPQ9Y3Y2 248 aaKnown RBP16.29■□□□□ 0.2
CBX4-202ENST00000448310 IGLV7-46A0A075B6I9 117 aa16.28■□□□□ 0.2
CBX4-202ENST00000448310 CDIP1Q9H305 208 aa16.28■□□□□ 0.2
CBX4-202ENST00000448310 TPRXLQ17RH7 258 aa16.26■□□□□ 0.19
CBX4-202ENST00000448310 TMEM223A0PJW6 202 aa16.23■□□□□ 0.19
CBX4-202ENST00000448310 SPRR4Q96PI1 79 aa16.23■□□□□ 0.19
CBX4-202ENST00000448310 SMIM13P0DJ93 91 aa16.2■□□□□ 0.18
CBX4-202ENST00000448310 CTAG1AP78358 180 aa16.2■□□□□ 0.18
CBX4-202ENST00000448310 LCE2AQ5TA79 106 aaPredicted RBP16.19■□□□□ 0.18
CBX4-202ENST00000448310 APOC3P02656 99 aa16.18■□□□□ 0.18
CBX4-202ENST00000448310 PPDPFQ9H3Y8 114 aa16.18■□□□□ 0.18
CBX4-202ENST00000448310 NCR3O14931 201 aa16.17■□□□□ 0.18
CBX4-202ENST00000448310 BOD1L2Q8IYS8 172 aa16.17■□□□□ 0.18
CBX4-202ENST00000448310 IFI27L1Q96BM0 104 aa16.17■□□□□ 0.18
CBX4-202ENST00000448310 TRAV12-1A0A0B4J245 112 aa16.16■□□□□ 0.18
CBX4-202ENST00000448310 ATP6V1G1O75348 118 aa16.16■□□□□ 0.18
CBX4-202ENST00000448310 MEIG1Q5JSS6 88 aa16.16■□□□□ 0.18
CBX4-202ENST00000448310 KRTAP9-2Q9BYQ4 174 aa16.15■□□□□ 0.18
CBX4-202ENST00000448310 PRYO14603 147 aa16.14■□□□□ 0.17
CBX4-202ENST00000448310 SPAG11AQ6PDA7 123 aa16.14■□□□□ 0.17
CBX4-202ENST00000448310 MIR7-3HGQ8N6C7 128 aa16.14■□□□□ 0.17
CBX4-202ENST00000448310 ZNF706Q9Y5V0 76 aaPredicted RBP16.13■□□□□ 0.17
CBX4-202ENST00000448310 DAND5Q8N907 189 aa16.12■□□□□ 0.17
CBX4-202ENST00000448310 CHCHD1Q96BP2 118 aaKnown RBP16.12■□□□□ 0.17
CBX4-202ENST00000448310 SNAPINO95295 136 aa16.1■□□□□ 0.17
CBX4-202ENST00000448310 SPRR1AP35321 89 aa16.1■□□□□ 0.17
CBX4-202ENST00000448310 SMCR5Q8TEV8 140 aa16.1■□□□□ 0.17
CBX4-202ENST00000448310 C4orf48Q5BLP8 95 aa16.09■□□□□ 0.17
CBX4-202ENST00000448310 LINC00337Q8N6G1 96 aa16.09■□□□□ 0.17
CBX4-202ENST00000448310 Q8NBF4 154 aa16.09■□□□□ 0.17
CBX4-202ENST00000448310 KCNQ1DNQ9H478 68 aa16.09■□□□□ 0.17
CBX4-202ENST00000448310 SVBPQ8N300 66 aa16.08■□□□□ 0.16
CBX4-202ENST00000448310 HERV-K104P63124 156 aa16.07■□□□□ 0.16
CBX4-202ENST00000448310 YPEL4Q96NS1 127 aa16.07■□□□□ 0.16
CBX4-202ENST00000448310 TRBV10-3A0A0K0K1G6 114 aa16.06■□□□□ 0.16
CBX4-202ENST00000448310 ETDCA0A1B0GVM5 59 aa16.06■□□□□ 0.16
CBX4-202ENST00000448310 KRTAP4-16G5E9R7 235 aaPredicted RBP16.06■□□□□ 0.16
CBX4-202ENST00000448310 FAM19A2Q8N3H0 131 aa16.06■□□□□ 0.16
CBX4-202ENST00000448310 NDUFA12Q9UI09 145 aa16.06■□□□□ 0.16
CBX4-202ENST00000448310 NDUFA5Q16718 116 aa16.05■□□□□ 0.16
CBX4-202ENST00000448310 H0Y8G0 127 aa16.03■□□□□ 0.16
CBX4-202ENST00000448310 FP248Q71RG6 208 aaPredicted RBP16.03■□□□□ 0.16
CBX4-202ENST00000448310 MYMXA0A1B0GTQ4 84 aa16.01■□□□□ 0.15
CBX4-202ENST00000448310 HSBP1O75506 76 aa16.01■□□□□ 0.15
CBX4-202ENST00000448310 TSPEAR-AS2P59090 65 aa16■□□□□ 0.15
CBX4-202ENST00000448310 LINC00587B1AMM8 73 aa15.99■□□□□ 0.15
CBX4-202ENST00000448310 GAGE2AQ6NT46 116 aa15.99■□□□□ 0.15
CBX4-202ENST00000448310 MAP1LC3CQ9BXW4 147 aa15.99■□□□□ 0.15
CBX4-202ENST00000448310 KRTAP13-3Q3SY46 172 aa15.98■□□□□ 0.15
CBX4-202ENST00000448310 LINC00483Q53H64 154 aa15.98■□□□□ 0.15
CBX4-202ENST00000448310 B5MCH6 92 aa15.96■□□□□ 0.15
CBX4-202ENST00000448310 ERC2-IT1O76042 136 aa15.96■□□□□ 0.15
CBX4-202ENST00000448310 SPINK1P00995 79 aa15.94■□□□□ 0.14
CBX4-202ENST00000448310 S100A12P80511 92 aa15.94■□□□□ 0.14
CBX4-202ENST00000448310 IGLV9-49A0A0B4J1Y8 123 aa15.93■□□□□ 0.14
CBX4-202ENST00000448310 DDTP30046 118 aa15.93■□□□□ 0.14
CBX4-202ENST00000448310 MOBPQ13875 183 aa15.93■□□□□ 0.14
CBX4-202ENST00000448310 LEPROTO15243 131 aa15.92■□□□□ 0.14
CBX4-202ENST00000448310 LOC107984156A0A0G2JMH3 177 aa15.9■□□□□ 0.14
CBX4-202ENST00000448310 LEPROTL1O95214 131 aa15.9■□□□□ 0.14
CBX4-202ENST00000448310 ARL17AQ8IVW1 177 aa15.9■□□□□ 0.14
CBX4-202ENST00000448310 Q9BRP9 147 aa15.9■□□□□ 0.14
CBX4-202ENST00000448310 LINC00310P59036 64 aa15.89■□□□□ 0.13
CBX4-202ENST00000448310 TRBV10-2A0A0K0K1G8 114 aa15.88■□□□□ 0.13
CBX4-202ENST00000448310 J3QQQ9 107 aa15.87■□□□□ 0.13
CBX4-202ENST00000448310 SERF1AO75920 110 aa15.87■□□□□ 0.13
CBX4-202ENST00000448310 TRGC2P03986 189 aa15.87■□□□□ 0.13
CBX4-202ENST00000448310 ASB16-AS1Q495Z4 193 aa15.86■□□□□ 0.13
CBX4-202ENST00000448310 Q6ZRX8 168 aa15.86■□□□□ 0.13
CBX4-202ENST00000448310 PMCHL2Q9BQD1 86 aa15.86■□□□□ 0.13
CBX4-202ENST00000448310 PLNP26678 52 aa15.85■□□□□ 0.13
CBX4-202ENST00000448310 SPANXB1Q9NS25 103 aaPredicted RBP15.85■□□□□ 0.13
CBX4-202ENST00000448310 SSBP3-AS1Q7Z2R9 100 aa15.84■□□□□ 0.13
CBX4-202ENST00000448310 MIEN1Q9BRT3 115 aa15.84■□□□□ 0.13
CBX4-202ENST00000448310 Q8N377 158 aa15.83■□□□□ 0.12
CBX4-202ENST00000448310 FABP4P15090 132 aa15.82■□□□□ 0.12
CBX4-202ENST00000448310 S100A7L2Q5SY68 101 aa15.82■□□□□ 0.12
CBX4-202ENST00000448310 KRTAP4-1Q9BYQ7 146 aa15.82■□□□□ 0.12
CBX4-202ENST00000448310 DPM2O94777 84 aa15.81■□□□□ 0.12
CBX4-202ENST00000448310 LGALS3P17931 250 aaKnown RBP15.81■□□□□ 0.12
CBX4-202ENST00000448310 HERVK_113P61574 105 aa15.81■□□□□ 0.12
CBX4-202ENST00000448310 IGLV6-57P01721 117 aa15.8■□□□□ 0.12
CBX4-202ENST00000448310 NMUP48645 174 aa15.79■□□□□ 0.12
CBX4-202ENST00000448310 NPC2P61916 151 aa15.79■□□□□ 0.12
CBX4-202ENST00000448310 RPS29P62273 56 aaKnown RBP15.79■□□□□ 0.12
CBX4-202ENST00000448310 NDUFC2O95298 119 aa15.78■□□□□ 0.12
CBX4-202ENST00000448310 IGKCP01834 107 aa15.78■□□□□ 0.12
CBX4-202ENST00000448310 SOSTDC1Q6X4U4 206 aa15.78■□□□□ 0.12
CBX4-202ENST00000448310 HSPB8Q9UJY1 196 aa15.78■□□□□ 0.12
CBX4-202ENST00000448310 TRAV23DV6A0A075B6W5 121 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms