RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 KTN1-AS1Q86SY8 53 aa6.67□□□□□ -1.34
SMC6-207ENST00000448223 FASNP49327 2511 aaKnown RBP6.67□□□□□ -1.34
SMC6-207ENST00000448223 A0A1B0GU69 56 aa6.67□□□□□ -1.34
SMC6-207ENST00000448223 CD164L2Q6UWJ8 174 aa6.67□□□□□ -1.34
SMC6-207ENST00000448223 ITPR1Q14643 2758 aa6.67□□□□□ -1.34
SMC6-207ENST00000448223 RNF223E7ERA6 249 aa6.67□□□□□ -1.34
SMC6-207ENST00000448223 LMO4P61968 165 aa6.66□□□□□ -1.34
SMC6-207ENST00000448223 LINC00242Q5T6M2 205 aa6.66□□□□□ -1.34
SMC6-207ENST00000448223 C1orf64Q8NEQ6 169 aa6.66□□□□□ -1.34
SMC6-207ENST00000448223 DCHS2Q6V1P9 2916 aa6.66□□□□□ -1.34
SMC6-207ENST00000448223 ATP11AUNQ6ZP68 121 aa6.66□□□□□ -1.34
SMC6-207ENST00000448223 LCA10Q71F78 164 aa6.66□□□□□ -1.34
SMC6-207ENST00000448223 Q8IZM0 81 aa6.66□□□□□ -1.34
SMC6-207ENST00000448223 SMIM1B2RUZ4 78 aa6.65□□□□□ -1.34
SMC6-207ENST00000448223 NHLRC4P0CG21 123 aaPredicted RBP6.65□□□□□ -1.34
SMC6-207ENST00000448223 LINC00474Q9P2X8 69 aa6.65□□□□□ -1.34
SMC6-207ENST00000448223 LINC00959A0A1B0GUT2 108 aa6.65□□□□□ -1.35
SMC6-207ENST00000448223 A8MUN3 132 aa6.65□□□□□ -1.35
SMC6-207ENST00000448223 SYCNQ0VAF6 134 aa6.65□□□□□ -1.35
SMC6-207ENST00000448223 MAP6D1Q9H9H5 199 aa6.64□□□□□ -1.35
SMC6-207ENST00000448223 SMIM29Q86T20 159 aa6.64□□□□□ -1.35
SMC6-207ENST00000448223 CYP4F30PQ9H0H9 118 aa6.64□□□□□ -1.35
SMC6-207ENST00000448223 DEFB4AO15263 64 aa6.64□□□□□ -1.35
SMC6-207ENST00000448223 C7orf65Q6ZTY9 151 aa6.63□□□□□ -1.35
SMC6-207ENST00000448223 ZNF580Q9UK33 172 aa6.63□□□□□ -1.35
SMC6-207ENST00000448223 K7EQG2 157 aa6.63□□□□□ -1.35
SMC6-207ENST00000448223 CDC42SE2Q9NRR3 84 aa6.63□□□□□ -1.35
SMC6-207ENST00000448223 ZANQ9Y493 2812 aa6.63□□□□□ -1.35
SMC6-207ENST00000448223 CELSR1Q9NYQ6 3014 aa6.62□□□□□ -1.35
SMC6-207ENST00000448223 CHD6Q8TD26 2715 aa6.62□□□□□ -1.35
SMC6-207ENST00000448223 SPINK1P00995 79 aa6.62□□□□□ -1.35
SMC6-207ENST00000448223 DEFB135Q30KP9 77 aa6.62□□□□□ -1.35
SMC6-207ENST00000448223 CRYBG3Q68DQ2 2970 aa6.61□□□□□ -1.35
SMC6-207ENST00000448223 IGLV2-18A0A075B6J9 118 aa6.61□□□□□ -1.35
SMC6-207ENST00000448223 C11orf71Q6IPW1 123 aa6.61□□□□□ -1.35
SMC6-207ENST00000448223 COX8CQ7Z4L0 72 aa6.61□□□□□ -1.35
SMC6-207ENST00000448223 PRR3P79522 188 aaKnown RBP6.61□□□□□ -1.35
SMC6-207ENST00000448223 DEFB116Q30KQ4 102 aa6.61□□□□□ -1.35
SMC6-207ENST00000448223 MUC4Q99102 2169 aa6.6□□□□□ -1.35
SMC6-207ENST00000448223 C2orf48Q96LS8 159 aa6.6□□□□□ -1.35
SMC6-207ENST00000448223 TM2D3Q9BRN9 247 aa6.6□□□□□ -1.35
SMC6-207ENST00000448223 LOC100131303A0A0U1RQF7 123 aa6.6□□□□□ -1.35
SMC6-207ENST00000448223 RPL37AP8A6NKH3 93 aa6.6□□□□□ -1.35
SMC6-207ENST00000448223 C14orf177Q52M58 125 aa6.6□□□□□ -1.35
SMC6-207ENST00000448223 AMELXQ99217 191 aa6.6□□□□□ -1.35
SMC6-207ENST00000448223 TRAV10A0A0B4J240 114 aa6.6□□□□□ -1.35
SMC6-207ENST00000448223 H3BS24 57 aa6.6□□□□□ -1.35
SMC6-207ENST00000448223 FBXL19-AS1Q494R0 122 aa6.59□□□□□ -1.35
SMC6-207ENST00000448223 KLLNB2CW77 178 aa6.59□□□□□ -1.35
SMC6-207ENST00000448223 C9orf66Q5T8R8 295 aa6.59□□□□□ -1.35
SMC6-207ENST00000448223 AVPP01185 164 aa6.59□□□□□ -1.36
SMC6-207ENST00000448223 C9orf116Q5BN46 136 aaPredicted RBP6.59□□□□□ -1.36
SMC6-207ENST00000448223 CYSRT1A8MQ03 144 aa6.58□□□□□ -1.36
SMC6-207ENST00000448223 COX6A2Q02221 97 aa6.58□□□□□ -1.36
SMC6-207ENST00000448223 LINC00337Q8N6G1 96 aa6.58□□□□□ -1.36
SMC6-207ENST00000448223 PSMG3-AS1Q96PY0 264 aa6.58□□□□□ -1.36
SMC6-207ENST00000448223 IGHV6-1A0A0B4J1U7 121 aa6.58□□□□□ -1.36
SMC6-207ENST00000448223 A0A087WSZ3 146 aa6.58□□□□□ -1.36
SMC6-207ENST00000448223 C18orf65Q6ZTR6 163 aa6.56□□□□□ -1.36
SMC6-207ENST00000448223 SPATA3Q8NHX4 192 aa6.56□□□□□ -1.36
SMC6-207ENST00000448223 IGLV9-49A0A0B4J1Y8 123 aa6.56□□□□□ -1.36
SMC6-207ENST00000448223 LINC01546A6NGU7 62 aa6.56□□□□□ -1.36
SMC6-207ENST00000448223 ACYP2P14621 99 aa6.56□□□□□ -1.36
SMC6-207ENST00000448223 UNQ6190/PRO20217Q6UXQ8 127 aa6.56□□□□□ -1.36
SMC6-207ENST00000448223 A6NDX4 124 aa6.56□□□□□ -1.36
SMC6-207ENST00000448223 H3BPC8 53 aa6.56□□□□□ -1.36
SMC6-207ENST00000448223 C4orf3Q8WVX3 66 aa6.56□□□□□ -1.36
SMC6-207ENST00000448223 HRNRQ86YZ3 2850 aaPredicted RBP6.55□□□□□ -1.36
SMC6-207ENST00000448223 FSHBP01225 129 aa6.55□□□□□ -1.36
SMC6-207ENST00000448223 FHL3Q13643 280 aa6.55□□□□□ -1.36
SMC6-207ENST00000448223 ZNF575Q86XF7 245 aa6.55□□□□□ -1.36
SMC6-207ENST00000448223 NBEAL2Q6ZNJ1 2754 aa6.55□□□□□ -1.36
SMC6-207ENST00000448223 CHCHD7Q9BUK0 85 aa6.55□□□□□ -1.36
SMC6-207ENST00000448223 CFAP46Q8IYW2 2715 aa6.55□□□□□ -1.36
SMC6-207ENST00000448223 KPRPQ5T749 579 aaPredicted RBP6.55□□□□□ -1.36
SMC6-207ENST00000448223 Q6ZTC4 211 aa6.55□□□□□ -1.36
SMC6-207ENST00000448223 X6R8D5 127 aa6.55□□□□□ -1.36
SMC6-207ENST00000448223 UTP20O75691 2785 aaKnown RBP6.55□□□□□ -1.36
SMC6-207ENST00000448223 HECTD1Q9ULT8 2610 aa6.54□□□□□ -1.36
SMC6-207ENST00000448223 FLNAP21333 2647 aaKnown RBP6.54□□□□□ -1.36
SMC6-207ENST00000448223 ERC2-IT1O76042 136 aa6.54□□□□□ -1.36
SMC6-207ENST00000448223 Q96MF0 132 aa6.54□□□□□ -1.36
SMC6-207ENST00000448223 Q8N2B8 174 aa6.54□□□□□ -1.36
SMC6-207ENST00000448223 SMCR5Q8TEV8 140 aa6.54□□□□□ -1.36
SMC6-207ENST00000448223 KLKP1Q107X0 134 aa6.53□□□□□ -1.36
SMC6-207ENST00000448223 LOC101927531A0A1B0GV80 90 aa6.53□□□□□ -1.36
SMC6-207ENST00000448223 PRR15Q8IV56 129 aa6.53□□□□□ -1.36
SMC6-207ENST00000448223 LINC00482Q8N8I6 264 aa6.53□□□□□ -1.36
SMC6-207ENST00000448223 TEX15Q9BXT5 2789 aa6.53□□□□□ -1.36
SMC6-207ENST00000448223 SSBP3-AS1Q7Z2R9 100 aa6.53□□□□□ -1.36
SMC6-207ENST00000448223 TRAV22A0A0B4J277 110 aa6.53□□□□□ -1.36
SMC6-207ENST00000448223 EGFEM1PQ0D2K5 195 aa6.53□□□□□ -1.36
SMC6-207ENST00000448223 A8MTW9 85 aa6.52□□□□□ -1.37
SMC6-207ENST00000448223 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.52□□□□□ -1.37
SMC6-207ENST00000448223 FAM218AQ96MZ4 157 aa6.52□□□□□ -1.37
SMC6-207ENST00000448223 USP24Q9UPU5 2620 aa6.52□□□□□ -1.37
SMC6-207ENST00000448223 BBC3Q96PG8 261 aaPredicted RBP6.52□□□□□ -1.37
SMC6-207ENST00000448223 FLNBO75369 2602 aaKnown RBP6.51□□□□□ -1.37
SMC6-207ENST00000448223 GCN1Q92616 2671 aaKnown RBP6.51□□□□□ -1.37
SMC6-207ENST00000448223 TP53AIP1Q9HCN2 124 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms