RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 C6orf223Q8N319 242 aa8.85□□□□□ -0.99
SHC1-210ENST00000448116 IGHV4-28A0A0C4DH34 117 aa8.84□□□□□ -0.99
SHC1-210ENST00000448116 KIAA0087Q14695 138 aa8.84□□□□□ -0.99
SHC1-210ENST00000448116 C6orf99Q4VX62 202 aa8.84□□□□□ -0.99
SHC1-210ENST00000448116 LY6G6DO95868 133 aa8.84□□□□□ -1
SHC1-210ENST00000448116 NANOS2P60321 138 aaKnown RBP8.84□□□□□ -1
SHC1-210ENST00000448116 C11orf45Q8TAV5 145 aa8.84□□□□□ -1
SHC1-210ENST00000448116 HIST1H4AP62805 103 aaKnown RBP8.83□□□□□ -1
SHC1-210ENST00000448116 UNQ6190/PRO20217Q6UXQ8 127 aa8.83□□□□□ -1
SHC1-210ENST00000448116 Q8N814 137 aa8.83□□□□□ -1
SHC1-210ENST00000448116 ATRQ13535 2644 aa8.83□□□□□ -1
SHC1-210ENST00000448116 LYRM9A8MSI8 78 aa8.82□□□□□ -1
SHC1-210ENST00000448116 CELA1Q9UNI1 258 aa8.82□□□□□ -1
SHC1-210ENST00000448116 C10orf25Q5T742 122 aa8.82□□□□□ -1
SHC1-210ENST00000448116 KLK12Q9UKR0 248 aa8.82□□□□□ -1
SHC1-210ENST00000448116 ANK3Q12955 4377 aaKnown RBP8.81□□□□□ -1
SHC1-210ENST00000448116 CRYGAP11844 174 aa8.81□□□□□ -1
SHC1-210ENST00000448116 TMEM258P61165 79 aa8.81□□□□□ -1
SHC1-210ENST00000448116 SPAG11BQ08648 103 aa8.81□□□□□ -1
SHC1-210ENST00000448116 Q8NDZ9 215 aa8.81□□□□□ -1
SHC1-210ENST00000448116 OBSCN-AS1Q96MR7 158 aa8.81□□□□□ -1
SHC1-210ENST00000448116 C9orf66Q5T8R8 295 aa8.8□□□□□ -1
SHC1-210ENST00000448116 PMAIP1Q13794 54 aa8.79□□□□□ -1
SHC1-210ENST00000448116 WFDC9Q8NEX5 89 aa8.79□□□□□ -1
SHC1-210ENST00000448116 TMEM256-PLSCR3K7ERE1 68 aa8.79□□□□□ -1
SHC1-210ENST00000448116 CCKP06307 115 aa8.79□□□□□ -1
SHC1-210ENST00000448116 APOC4P55056 127 aa8.79□□□□□ -1
SHC1-210ENST00000448116 RPL18AQ02543 176 aaKnown RBP8.79□□□□□ -1
SHC1-210ENST00000448116 COX17Q14061 63 aa8.78□□□□□ -1
SHC1-210ENST00000448116 Q6JHZ5 121 aa8.78□□□□□ -1
SHC1-210ENST00000448116 ATOX1O00244 68 aa8.78□□□□□ -1
SHC1-210ENST00000448116 CYSRT1A8MQ03 144 aa8.78□□□□□ -1
SHC1-210ENST00000448116 NDUFC2O95298 119 aa8.78□□□□□ -1
SHC1-210ENST00000448116 JMJD7-PLA2G4BH0Y9G9 81 aa8.77□□□□□ -1.01
SHC1-210ENST00000448116 J3QKU1 62 aa8.77□□□□□ -1.01
SHC1-210ENST00000448116 H3BS24 57 aa8.77□□□□□ -1.01
SHC1-210ENST00000448116 XAGE1AQ9HD64 81 aa8.77□□□□□ -1.01
SHC1-210ENST00000448116 LAMTOR3Q9UHA4 124 aa8.77□□□□□ -1.01
SHC1-210ENST00000448116 INAFM1C9JVW0 142 aa8.77□□□□□ -1.01
SHC1-210ENST00000448116 LINC00474Q9P2X8 69 aa8.77□□□□□ -1.01
SHC1-210ENST00000448116 TENM1Q9UKZ4 2725 aa8.76□□□□□ -1.01
SHC1-210ENST00000448116 SPART-AS1P0CW21 52 aa8.76□□□□□ -1.01
SHC1-210ENST00000448116 USP17L23D6RBM5 183 aa8.74□□□□□ -1.01
SHC1-210ENST00000448116 RBM3P98179 157 aaKnown RBP8.74□□□□□ -1.01
SHC1-210ENST00000448116 LINC00575Q6W349 94 aa8.74□□□□□ -1.01
SHC1-210ENST00000448116 Q8NAQ8 132 aa8.74□□□□□ -1.01
SHC1-210ENST00000448116 LELP1Q5T871 98 aa8.73□□□□□ -1.01
SHC1-210ENST00000448116 LINC00167Q96N53 147 aa8.73□□□□□ -1.01
SHC1-210ENST00000448116 TRAV23DV6A0A075B6W5 121 aa8.73□□□□□ -1.01
SHC1-210ENST00000448116 ENHOQ6UWT2 76 aa8.73□□□□□ -1.01
SHC1-210ENST00000448116 HIGD2BQ4VC39 106 aa8.72□□□□□ -1.01
SHC1-210ENST00000448116 MPLKIPQ8TAP9 179 aa8.72□□□□□ -1.01
SHC1-210ENST00000448116 MIFP14174 115 aa8.72□□□□□ -1.01
SHC1-210ENST00000448116 UBL5Q9BZL1 73 aa8.72□□□□□ -1.01
SHC1-210ENST00000448116 Q6ZQY7 126 aa8.71□□□□□ -1.02
SHC1-210ENST00000448116 TEP1Q99973 2627 aaKnown RBP8.71□□□□□ -1.02
SHC1-210ENST00000448116 FP248Q71RG6 208 aaPredicted RBP8.71□□□□□ -1.02
SHC1-210ENST00000448116 IGHV4-30-4P0DP06 118 aa8.7□□□□□ -1.02
SHC1-210ENST00000448116 TRBV10-3A0A0K0K1G6 114 aa8.7□□□□□ -1.02
SHC1-210ENST00000448116 OTOGQ6ZRI0 2925 aa8.7□□□□□ -1.02
SHC1-210ENST00000448116 SERP2Q8N6R1 65 aa8.7□□□□□ -1.02
SHC1-210ENST00000448116 HAMPP81172 84 aa8.69□□□□□ -1.02
SHC1-210ENST00000448116 M0R2N4 97 aa8.68□□□□□ -1.02
SHC1-210ENST00000448116 C6orf48Q9UBA6 75 aa8.68□□□□□ -1.02
SHC1-210ENST00000448116 LYPD5Q6UWN5 251 aa8.68□□□□□ -1.02
SHC1-210ENST00000448116 A0A0J9YWU9 116 aa8.67□□□□□ -1.02
SHC1-210ENST00000448116 GHRHP01286 108 aa8.67□□□□□ -1.02
SHC1-210ENST00000448116 WFDC10BQ8IUB3 73 aa8.67□□□□□ -1.02
SHC1-210ENST00000448116 CAMK2N2Q96S95 79 aa8.67□□□□□ -1.02
SHC1-210ENST00000448116 NSD1Q96L73 2696 aaPredicted RBP8.67□□□□□ -1.02
SHC1-210ENST00000448116 HIVEP1P15822 2718 aa8.66□□□□□ -1.02
SHC1-210ENST00000448116 DIRC1Q969H9 104 aa8.66□□□□□ -1.02
SHC1-210ENST00000448116 UPK3BQ9BT76 320 aa8.66□□□□□ -1.02
SHC1-210ENST00000448116 PRR34Q9NV39 138 aa8.66□□□□□ -1.02
SHC1-210ENST00000448116 IGLV6-57P01721 117 aa8.66□□□□□ -1.02
SHC1-210ENST00000448116 CD164Q04900 197 aa8.66□□□□□ -1.02
SHC1-210ENST00000448116 Q6ZQT0 140 aa8.65□□□□□ -1.03
SHC1-210ENST00000448116 MRPL55Q7Z7F7 128 aaKnown RBP8.65□□□□□ -1.03
SHC1-210ENST00000448116 TRRAPQ9Y4A5 3859 aa8.64□□□□□ -1.03
SHC1-210ENST00000448116 KPRPQ5T749 579 aaPredicted RBP8.63□□□□□ -1.03
SHC1-210ENST00000448116 ZNF73O43830 326 aaPredicted RBP8.63□□□□□ -1.03
SHC1-210ENST00000448116 C20orf197Q8N268 126 aa8.63□□□□□ -1.03
SHC1-210ENST00000448116 COX7BP24311 80 aa8.63□□□□□ -1.03
SHC1-210ENST00000448116 OXLD1Q5BKU9 147 aa8.63□□□□□ -1.03
SHC1-210ENST00000448116 ATP5EP2Q5VTU8 51 aa8.63□□□□□ -1.03
SHC1-210ENST00000448116 SCXQ7RTU7 201 aa8.61□□□□□ -1.03
SHC1-210ENST00000448116 BAHCC1Q9P281 2608 aa8.61□□□□□ -1.03
SHC1-210ENST00000448116 Q6ZRU5 148 aa8.61□□□□□ -1.03
SHC1-210ENST00000448116 Q6ZTC4 211 aa8.6□□□□□ -1.03
SHC1-210ENST00000448116 MUC7Q8TAX7 377 aa8.6□□□□□ -1.03
SHC1-210ENST00000448116 Q6ZVQ6 151 aa8.6□□□□□ -1.03
SHC1-210ENST00000448116 PKD1L1Q8TDX9 2849 aa8.6□□□□□ -1.03
SHC1-210ENST00000448116 LINC01547P58512 204 aaPredicted RBP8.59□□□□□ -1.03
SHC1-210ENST00000448116 GVQW2A0A096LPI5 108 aaPredicted RBP8.59□□□□□ -1.03
SHC1-210ENST00000448116 IGKV2D-24A0A075B6R9 120 aa8.59□□□□□ -1.04
SHC1-210ENST00000448116 LOC110117498A0A087WWA1 95 aa8.58□□□□□ -1.04
SHC1-210ENST00000448116 SMIM26A0A096LP01 95 aa8.57□□□□□ -1.04
SHC1-210ENST00000448116 VPREB1P12018 145 aa8.57□□□□□ -1.04
SHC1-210ENST00000448116 SERP1Q9Y6X1 66 aa8.57□□□□□ -1.04
SHC1-210ENST00000448116 ESRGQ1W209 222 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms