RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 CDKN2A-AS1Q9UH64 79 aa6.75□□□□□ -1.33
NPIPB3-202ENST00000448012 TINCRA0A1B0GVN0 87 aa6.74□□□□□ -1.33
NPIPB3-202ENST00000448012 F8VRH5 84 aa6.74□□□□□ -1.33
NPIPB3-202ENST00000448012 H3BRM9 83 aa6.74□□□□□ -1.33
NPIPB3-202ENST00000448012 ATP5LO75964 103 aa6.74□□□□□ -1.33
NPIPB3-202ENST00000448012 LBHQ53QV2 105 aaPredicted RBP6.74□□□□□ -1.33
NPIPB3-202ENST00000448012 PAM16Q9Y3D7 125 aa6.74□□□□□ -1.33
NPIPB3-202ENST00000448012 FAT3Q8TDW7 4589 aa6.74□□□□□ -1.33
NPIPB3-202ENST00000448012 PKHD1L1Q86WI1 4243 aa6.74□□□□□ -1.33
NPIPB3-202ENST00000448012 H0Y8G0 127 aa6.73□□□□□ -1.33
NPIPB3-202ENST00000448012 DDTP30046 118 aa6.73□□□□□ -1.33
NPIPB3-202ENST00000448012 SPATA45Q537H7 98 aa6.73□□□□□ -1.33
NPIPB3-202ENST00000448012 LINC00587B1AMM8 73 aa6.72□□□□□ -1.33
NPIPB3-202ENST00000448012 PMVKQ15126 192 aa6.72□□□□□ -1.33
NPIPB3-202ENST00000448012 ATOH7Q8N100 152 aa6.72□□□□□ -1.33
NPIPB3-202ENST00000448012 HSBP1L1C9JCN9 74 aa6.71□□□□□ -1.34
NPIPB3-202ENST00000448012 KRTAP10-8P60410 259 aa6.71□□□□□ -1.34
NPIPB3-202ENST00000448012 COX7B2Q8TF08 81 aa6.71□□□□□ -1.34
NPIPB3-202ENST00000448012 CST9LQ9H4G1 147 aa6.71□□□□□ -1.34
NPIPB3-202ENST00000448012 XAGE1AQ9HD64 81 aa6.71□□□□□ -1.34
NPIPB3-202ENST00000448012 H0Y9J4 135 aa6.7□□□□□ -1.34
NPIPB3-202ENST00000448012 C9orf129Q5T035 196 aaKnown RBP6.7□□□□□ -1.34
NPIPB3-202ENST00000448012 SMIM1B2RUZ4 78 aa6.69□□□□□ -1.34
NPIPB3-202ENST00000448012 ODF1Q14990 250 aa6.69□□□□□ -1.34
NPIPB3-202ENST00000448012 PMCHL2Q9BQD1 86 aa6.69□□□□□ -1.34
NPIPB3-202ENST00000448012 C22orf24Q9Y442 160 aa6.69□□□□□ -1.34
NPIPB3-202ENST00000448012 SPINK8P0C7L1 97 aa6.68□□□□□ -1.34
NPIPB3-202ENST00000448012 MIEN1Q9BRT3 115 aa6.68□□□□□ -1.34
NPIPB3-202ENST00000448012 UQCR10Q9UDW1 63 aa6.68□□□□□ -1.34
NPIPB3-202ENST00000448012 IGLV1-50A0A075B6I6 118 aa6.67□□□□□ -1.34
NPIPB3-202ENST00000448012 IGLV5-45A0A087WSX0 123 aa6.67□□□□□ -1.34
NPIPB3-202ENST00000448012 TRAV12-1A0A0B4J245 112 aa6.67□□□□□ -1.34
NPIPB3-202ENST00000448012 DPM2O94777 84 aa6.67□□□□□ -1.34
NPIPB3-202ENST00000448012 IGLC3P0DOY3 106 aa6.67□□□□□ -1.34
NPIPB3-202ENST00000448012 RPL13AP40429 203 aaKnown RBP6.67□□□□□ -1.34
NPIPB3-202ENST00000448012 MRPL55Q7Z7F7 128 aaKnown RBP6.67□□□□□ -1.34
NPIPB3-202ENST00000448012 NKAPP1Q8N9T2 125 aa6.67□□□□□ -1.34
NPIPB3-202ENST00000448012 TP73-AS1Q9UF72 201 aa6.67□□□□□ -1.34
NPIPB3-202ENST00000448012 RPL28P46779 137 aaKnown RBP6.66□□□□□ -1.34
NPIPB3-202ENST00000448012 PRR26Q8N8Z3 221 aa6.66□□□□□ -1.34
NPIPB3-202ENST00000448012 HMCN2Q8NDA2 5059 aa6.65□□□□□ -1.34
NPIPB3-202ENST00000448012 ZNF861PO60384 105 aa6.65□□□□□ -1.34
NPIPB3-202ENST00000448012 IGKCP01834 107 aa6.65□□□□□ -1.34
NPIPB3-202ENST00000448012 PLNP26678 52 aa6.65□□□□□ -1.34
NPIPB3-202ENST00000448012 SFTA2Q6UW10 78 aa6.65□□□□□ -1.34
NPIPB3-202ENST00000448012 KRTAP11-1Q8IUC1 163 aa6.65□□□□□ -1.34
NPIPB3-202ENST00000448012 KRTAP7-1Q8IUC3 87 aa6.65□□□□□ -1.34
NPIPB3-202ENST00000448012 SLC25A34Q6PIV7 304 aa6.64□□□□□ -1.35
NPIPB3-202ENST00000448012 CHTOPQ9Y3Y2 248 aaKnown RBP6.64□□□□□ -1.35
NPIPB3-202ENST00000448012 BCE1O60756 84 aa6.63□□□□□ -1.35
NPIPB3-202ENST00000448012 PFN2P35080 140 aa6.63□□□□□ -1.35
NPIPB3-202ENST00000448012 TMEM170BQ5T4T1 132 aa6.63□□□□□ -1.35
NPIPB3-202ENST00000448012 C14orf144Q96I85 54 aa6.63□□□□□ -1.35
NPIPB3-202ENST00000448012 GAGE10A6NGK3 116 aa6.62□□□□□ -1.35
NPIPB3-202ENST00000448012 COX8AP10176 69 aa6.62□□□□□ -1.35
NPIPB3-202ENST00000448012 UBE2AP49459 152 aa6.62□□□□□ -1.35
NPIPB3-202ENST00000448012 RPL24P83731 157 aaKnown RBP6.62□□□□□ -1.35
NPIPB3-202ENST00000448012 RPL37AP8A6NKH3 93 aa6.61□□□□□ -1.35
NPIPB3-202ENST00000448012 ZNF22P17026 224 aaPredicted RBP6.61□□□□□ -1.35
NPIPB3-202ENST00000448012 COX17Q14061 63 aa6.61□□□□□ -1.35
NPIPB3-202ENST00000448012 LINC00167Q96N53 147 aa6.61□□□□□ -1.35
NPIPB3-202ENST00000448012 ERG28Q9UKR5 140 aa6.61□□□□□ -1.35
NPIPB3-202ENST00000448012 IGLV5-39A0A0G2JS06 123 aa6.6□□□□□ -1.35
NPIPB3-202ENST00000448012 M0R143 59 aa6.6□□□□□ -1.35
NPIPB3-202ENST00000448012 IGLV5-37A0A075B6J1 123 aa6.59□□□□□ -1.35
NPIPB3-202ENST00000448012 DLEU1O43261 78 aa6.59□□□□□ -1.35
NPIPB3-202ENST00000448012 NMUP48645 174 aa6.59□□□□□ -1.35
NPIPB3-202ENST00000448012 CTAG1AP78358 180 aa6.59□□□□□ -1.35
NPIPB3-202ENST00000448012 C11orf86A6NJI1 115 aa6.58□□□□□ -1.36
NPIPB3-202ENST00000448012 KRTAP1-4P0C5Y4 121 aa6.58□□□□□ -1.36
NPIPB3-202ENST00000448012 CRYGAP11844 174 aa6.58□□□□□ -1.36
NPIPB3-202ENST00000448012 HERVK_113P61574 105 aa6.58□□□□□ -1.36
NPIPB3-202ENST00000448012 BOD1L2Q8IYS8 172 aa6.58□□□□□ -1.36
NPIPB3-202ENST00000448012 ZNF625Q96I27 306 aaPredicted RBP6.58□□□□□ -1.36
NPIPB3-202ENST00000448012 IGKV2-28A0A075B6P5 120 aa6.57□□□□□ -1.36
NPIPB3-202ENST00000448012 IGKV2D-28P01615 120 aa6.57□□□□□ -1.36
NPIPB3-202ENST00000448012 LINC00158P58513 81 aa6.57□□□□□ -1.36
NPIPB3-202ENST00000448012 SNHG12Q9BXW3 62 aa6.57□□□□□ -1.36
NPIPB3-202ENST00000448012 CDIP1Q9H305 208 aa6.57□□□□□ -1.36
NPIPB3-202ENST00000448012 SND1-IT1Q9HBX3 110 aa6.57□□□□□ -1.36
NPIPB3-202ENST00000448012 TNXBP22105 4242 aa6.57□□□□□ -1.36
NPIPB3-202ENST00000448012 IGKV2D-26A0A0A0MRZ7 120 aa6.56□□□□□ -1.36
NPIPB3-202ENST00000448012 C2orf91Q6ZV80 131 aa6.56□□□□□ -1.36
NPIPB3-202ENST00000448012 SVIPQ8NHG7 77 aa6.56□□□□□ -1.36
NPIPB3-202ENST00000448012 E9PLD3 99 aa6.55□□□□□ -1.36
NPIPB3-202ENST00000448012 PRR4Q16378 134 aa6.55□□□□□ -1.36
NPIPB3-202ENST00000448012 MEIG1Q5JSS6 88 aa6.55□□□□□ -1.36
NPIPB3-202ENST00000448012 PCP2Q8IVA1 136 aa6.55□□□□□ -1.36
NPIPB3-202ENST00000448012 TYMSOSQ8TAI1 123 aa6.55□□□□□ -1.36
NPIPB3-202ENST00000448012 H3BS24 57 aa6.54□□□□□ -1.36
NPIPB3-202ENST00000448012 BATFQ16520 125 aa6.54□□□□□ -1.36
NPIPB3-202ENST00000448012 FAM19A1Q7Z5A9 133 aa6.54□□□□□ -1.36
NPIPB3-202ENST00000448012 HIGD1BQ9P298 99 aa6.54□□□□□ -1.36
NPIPB3-202ENST00000448012 UBR4Q5T4S7 5183 aa6.53□□□□□ -1.36
NPIPB3-202ENST00000448012 TMEM223A0PJW6 202 aa6.53□□□□□ -1.36
NPIPB3-202ENST00000448012 VPREB1P12018 145 aa6.53□□□□□ -1.36
NPIPB3-202ENST00000448012 HINT1P49773 126 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-202ENST00000448012 HERV-K104P63124 156 aa6.53□□□□□ -1.36
NPIPB3-202ENST00000448012 HSD52Q0P140 79 aa6.53□□□□□ -1.36
NPIPB3-202ENST00000448012 A0A0U1RRA0 63 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms