RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 HERV-K104P63124 156 aa11.24□□□□□ -0.61
ATPAF2-201ENST00000444058 HSPB8Q9UJY1 196 aa11.24□□□□□ -0.61
ATPAF2-201ENST00000444058 IGKV2-28A0A075B6P5 120 aa11.23□□□□□ -0.61
ATPAF2-201ENST00000444058 IGKV2D-28P01615 120 aa11.23□□□□□ -0.61
ATPAF2-201ENST00000444058 LRP2P98164 4655 aa11.23□□□□□ -0.61
ATPAF2-201ENST00000444058 LINC00587B1AMM8 73 aa11.22□□□□□ -0.61
ATPAF2-201ENST00000444058 PLNP26678 52 aa11.21□□□□□ -0.61
ATPAF2-201ENST00000444058 UBE2AP49459 152 aa11.21□□□□□ -0.61
ATPAF2-201ENST00000444058 Q8NDZ9 215 aa11.2□□□□□ -0.62
ATPAF2-201ENST00000444058 MYMXA0A1B0GTQ4 84 aa11.19□□□□□ -0.62
ATPAF2-201ENST00000444058 H0Y8G0 127 aa11.19□□□□□ -0.62
ATPAF2-201ENST00000444058 TMEM126AQ9H061 195 aa11.19□□□□□ -0.62
ATPAF2-201ENST00000444058 NDUFA12Q9UI09 145 aa11.19□□□□□ -0.62
ATPAF2-201ENST00000444058 MEIG1Q5JSS6 88 aa11.18□□□□□ -0.62
ATPAF2-201ENST00000444058 A0A0U1RRA0 63 aa11.17□□□□□ -0.62
ATPAF2-201ENST00000444058 SMIM13P0DJ93 91 aa11.17□□□□□ -0.62
ATPAF2-201ENST00000444058 CRYGAP11844 174 aa11.17□□□□□ -0.62
ATPAF2-201ENST00000444058 M0R378 163 aa11.16□□□□□ -0.62
ATPAF2-201ENST00000444058 LEPROTO15243 131 aa11.16□□□□□ -0.62
ATPAF2-201ENST00000444058 DPM2O94777 84 aa11.16□□□□□ -0.62
ATPAF2-201ENST00000444058 FABP4P15090 132 aa11.16□□□□□ -0.62
ATPAF2-201ENST00000444058 PLEKHB2Q96CS7 222 aa11.16□□□□□ -0.62
ATPAF2-201ENST00000444058 MAP1LC3CQ9BXW4 147 aa11.16□□□□□ -0.62
ATPAF2-201ENST00000444058 TMEM238C9JI98 176 aa11.15□□□□□ -0.62
ATPAF2-201ENST00000444058 MIR7-3HGQ8N6C7 128 aa11.15□□□□□ -0.62
ATPAF2-201ENST00000444058 A0A087X002 238 aa11.14□□□□□ -0.63
ATPAF2-201ENST00000444058 IGKV2D-26A0A0A0MRZ7 120 aa11.14□□□□□ -0.63
ATPAF2-201ENST00000444058 HERVK_113P61574 105 aa11.14□□□□□ -0.63
ATPAF2-201ENST00000444058 PRLHP81277 87 aa11.14□□□□□ -0.63
ATPAF2-201ENST00000444058 FAM229BQ4G0N7 80 aa11.14□□□□□ -0.63
ATPAF2-201ENST00000444058 FAM19A1Q7Z5A9 133 aa11.14□□□□□ -0.63
ATPAF2-201ENST00000444058 BOD1L2Q8IYS8 172 aa11.14□□□□□ -0.63
ATPAF2-201ENST00000444058 IGKCP01834 107 aa11.13□□□□□ -0.63
ATPAF2-201ENST00000444058 LOC107984156A0A0G2JMH3 177 aa11.12□□□□□ -0.63
ATPAF2-201ENST00000444058 J3QQQ9 107 aa11.12□□□□□ -0.63
ATPAF2-201ENST00000444058 NMUP48645 174 aa11.12□□□□□ -0.63
ATPAF2-201ENST00000444058 TSPEAR-AS2P59090 65 aa11.12□□□□□ -0.63
ATPAF2-201ENST00000444058 ARL17AQ8IVW1 177 aa11.12□□□□□ -0.63
ATPAF2-201ENST00000444058 HIST1H2BKO60814 126 aa11.11□□□□□ -0.63
ATPAF2-201ENST00000444058 HIST1H2BJP06899 126 aa11.11□□□□□ -0.63
ATPAF2-201ENST00000444058 HIST1H2BOP23527 126 aa11.11□□□□□ -0.63
ATPAF2-201ENST00000444058 HIST1H2BBP33778 126 aa11.11□□□□□ -0.63
ATPAF2-201ENST00000444058 HIST1H2BDP58876 126 aa11.11□□□□□ -0.63
ATPAF2-201ENST00000444058 HIST1H2BCP62807 126 aa11.11□□□□□ -0.63
ATPAF2-201ENST00000444058 HIST2H2BEQ16778 126 aa11.11□□□□□ -0.63
ATPAF2-201ENST00000444058 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.11□□□□□ -0.63
ATPAF2-201ENST00000444058 HIST1H2BHQ93079 126 aa11.11□□□□□ -0.63
ATPAF2-201ENST00000444058 HIST1H2BNQ99877 126 aa11.11□□□□□ -0.63
ATPAF2-201ENST00000444058 HIST1H2BMQ99879 126 aa11.11□□□□□ -0.63
ATPAF2-201ENST00000444058 TYMSOSQ8TAI1 123 aa11.1□□□□□ -0.63
ATPAF2-201ENST00000444058 PMCHL2Q9BQD1 86 aa11.1□□□□□ -0.63
ATPAF2-201ENST00000444058 PRYO14603 147 aa11.08□□□□□ -0.64
ATPAF2-201ENST00000444058 LGALS3P17931 250 aaKnown RBP11.08□□□□□ -0.64
ATPAF2-201ENST00000444058 KCNQ1DNQ9H478 68 aa11.08□□□□□ -0.64
ATPAF2-201ENST00000444058 ANAPC11Q9NYG5 84 aa11.07□□□□□ -0.64
ATPAF2-201ENST00000444058 SYS1-DBNDD2H3BUS1 97 aa11.06□□□□□ -0.64
ATPAF2-201ENST00000444058 SPRR1AP35321 89 aa11.06□□□□□ -0.64
ATPAF2-201ENST00000444058 LINC00337Q8N6G1 96 aa11.06□□□□□ -0.64
ATPAF2-201ENST00000444058 KRTAP13-2Q52LG2 175 aa11.05□□□□□ -0.64
ATPAF2-201ENST00000444058 TRBV10-2A0A0K0K1G8 114 aa11.04□□□□□ -0.64
ATPAF2-201ENST00000444058 E9PLD3 99 aa11.04□□□□□ -0.64
ATPAF2-201ENST00000444058 NCR3O14931 201 aa11.04□□□□□ -0.64
ATPAF2-201ENST00000444058 HIGD2AQ9BW72 106 aa11.04□□□□□ -0.64
ATPAF2-201ENST00000444058 S100A12P80511 92 aa11.03□□□□□ -0.64
ATPAF2-201ENST00000444058 DAND5Q8N907 189 aa11.03□□□□□ -0.64
ATPAF2-201ENST00000444058 TRBV10-3A0A0K0K1G6 114 aa11.02□□□□□ -0.65
ATPAF2-201ENST00000444058 KRTAP4-16G5E9R7 235 aaPredicted RBP11.02□□□□□ -0.65
ATPAF2-201ENST00000444058 CTAG1AP78358 180 aa11.02□□□□□ -0.65
ATPAF2-201ENST00000444058 PET117Q6UWS5 81 aa11.02□□□□□ -0.65
ATPAF2-201ENST00000444058 MIEN1Q9BRT3 115 aa11.02□□□□□ -0.65
ATPAF2-201ENST00000444058 NDUFC2O95298 119 aa11.01□□□□□ -0.65
ATPAF2-201ENST00000444058 COA6Q5JTJ3 125 aaKnown RBP11.01□□□□□ -0.65
ATPAF2-201ENST00000444058 LINC01545Q5VT33 79 aa11.01□□□□□ -0.65
ATPAF2-201ENST00000444058 ZNF706Q9Y5V0 76 aaPredicted RBP11.01□□□□□ -0.65
ATPAF2-201ENST00000444058 TSPAN13O95857 204 aa11□□□□□ -0.65
ATPAF2-201ENST00000444058 SPANXB1Q9NS25 103 aaPredicted RBP11□□□□□ -0.65
ATPAF2-201ENST00000444058 LPAP08519 4548 aa11□□□□□ -0.65
ATPAF2-201ENST00000444058 RNF213Q63HN8 5207 aa11□□□□□ -0.65
ATPAF2-201ENST00000444058 A0A0J9YXY3 114 aa10.99□□□□□ -0.65
ATPAF2-201ENST00000444058 PRR4Q16378 134 aa10.99□□□□□ -0.65
ATPAF2-201ENST00000444058 SPRR4Q96PI1 79 aa10.99□□□□□ -0.65
ATPAF2-201ENST00000444058 ETDCA0A1B0GVM5 59 aa10.98□□□□□ -0.65
ATPAF2-201ENST00000444058 DDTP30046 118 aa10.98□□□□□ -0.65
ATPAF2-201ENST00000444058 LINC00304Q8N9R0 145 aa10.98□□□□□ -0.65
ATPAF2-201ENST00000444058 ADAMTSL4-AS1Q5T5F5 129 aa10.96□□□□□ -0.65
ATPAF2-201ENST00000444058 IGLV6-57P01721 117 aa10.95□□□□□ -0.66
ATPAF2-201ENST00000444058 C3orf79P0CE67 100 aa10.94□□□□□ -0.66
ATPAF2-201ENST00000444058 SMCR5Q8TEV8 140 aa10.94□□□□□ -0.66
ATPAF2-201ENST00000444058 B5MCH6 92 aa10.93□□□□□ -0.66
ATPAF2-201ENST00000444058 TIMM17BO60830 172 aa10.93□□□□□ -0.66
ATPAF2-201ENST00000444058 S100A7L2Q5SY68 101 aa10.93□□□□□ -0.66
ATPAF2-201ENST00000444058 SOSTDC1Q6X4U4 206 aa10.93□□□□□ -0.66
ATPAF2-201ENST00000444058 LITAFQ99732 161 aa10.92□□□□□ -0.66
ATPAF2-201ENST00000444058 SPAG11AQ6PDA7 123 aa10.91□□□□□ -0.66
ATPAF2-201ENST00000444058 C3orf22Q8N5N4 141 aa10.91□□□□□ -0.66
ATPAF2-201ENST00000444058 EIF4EBP3O60516 100 aaPredicted RBP10.9□□□□□ -0.66
ATPAF2-201ENST00000444058 LINC00483Q53H64 154 aa10.9□□□□□ -0.66
ATPAF2-201ENST00000444058 Q6ZRX8 168 aa10.9□□□□□ -0.66
ATPAF2-201ENST00000444058 CBY1Q9Y3M2 126 aa10.9□□□□□ -0.66
ATPAF2-201ENST00000444058 KRTDAPP60985 99 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms