RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 CIRBP-AS1Q8TBR5 109 aa11.63□□□□□ -0.55
LRCH1-204ENST00000443945 MYMXA0A1B0GTQ4 84 aa11.62□□□□□ -0.55
LRCH1-204ENST00000443945 FAM19A3Q7Z5A8 133 aa11.62□□□□□ -0.55
LRCH1-204ENST00000443945 CAMK2N2Q96S95 79 aa11.62□□□□□ -0.55
LRCH1-204ENST00000443945 SYCNQ0VAF6 134 aa11.61□□□□□ -0.55
LRCH1-204ENST00000443945 TINCRA0A1B0GVN0 87 aa11.61□□□□□ -0.55
LRCH1-204ENST00000443945 H3BMG7 143 aa11.61□□□□□ -0.55
LRCH1-204ENST00000443945 Q5VSD8 79 aa11.61□□□□□ -0.55
LRCH1-204ENST00000443945 CARD19Q96LW7 228 aa11.61□□□□□ -0.55
LRCH1-204ENST00000443945 EPM2AB3EWF7 344 aa11.59□□□□□ -0.55
LRCH1-204ENST00000443945 SPANXB1Q9NS25 103 aaPredicted RBP11.59□□□□□ -0.55
LRCH1-204ENST00000443945 TOMM7Q9P0U1 55 aa11.59□□□□□ -0.55
LRCH1-204ENST00000443945 DPH3Q96FX2 82 aa11.59□□□□□ -0.55
LRCH1-204ENST00000443945 Q6ZRU5 148 aa11.58□□□□□ -0.56
LRCH1-204ENST00000443945 IGKV2-24A0A0C4DH68 120 aa11.57□□□□□ -0.56
LRCH1-204ENST00000443945 PRSS2P07478 247 aa11.57□□□□□ -0.56
LRCH1-204ENST00000443945 C2orf48Q96LS8 159 aa11.57□□□□□ -0.56
LRCH1-204ENST00000443945 A0A1B0GWB2 263 aa11.56□□□□□ -0.56
LRCH1-204ENST00000443945 J3QR89 54 aa11.56□□□□□ -0.56
LRCH1-204ENST00000443945 LINC01561Q8N1V8 128 aa11.56□□□□□ -0.56
LRCH1-204ENST00000443945 SIGMAR1Q99720 223 aa11.56□□□□□ -0.56
LRCH1-204ENST00000443945 ETDBQ3ZM63 59 aa11.56□□□□□ -0.56
LRCH1-204ENST00000443945 NDUFA1O15239 70 aa11.55□□□□□ -0.56
LRCH1-204ENST00000443945 LINC00528Q8N1L1 170 aa11.55□□□□□ -0.56
LRCH1-204ENST00000443945 MTURNQ8N3F0 131 aa11.55□□□□□ -0.56
LRCH1-204ENST00000443945 VPS13BQ7Z7G8 4022 aa11.55□□□□□ -0.56
LRCH1-204ENST00000443945 HERVK_113P61574 105 aa11.55□□□□□ -0.56
LRCH1-204ENST00000443945 UNQ6190/PRO20217Q6UXQ8 127 aa11.55□□□□□ -0.56
LRCH1-204ENST00000443945 ZNF815PA8K554 130 aa11.54□□□□□ -0.56
LRCH1-204ENST00000443945 SPINK8P0C7L1 97 aa11.54□□□□□ -0.56
LRCH1-204ENST00000443945 KIAA0087Q14695 138 aa11.54□□□□□ -0.56
LRCH1-204ENST00000443945 IGLV5-45A0A087WSX0 123 aa11.53□□□□□ -0.56
LRCH1-204ENST00000443945 A0A096LNI7 61 aa11.53□□□□□ -0.56
LRCH1-204ENST00000443945 FAM229AH3BQW9 127 aa11.53□□□□□ -0.56
LRCH1-204ENST00000443945 CKS1BP61024 79 aa11.53□□□□□ -0.56
LRCH1-204ENST00000443945 TMEM170BQ5T4T1 132 aa11.53□□□□□ -0.56
LRCH1-204ENST00000443945 C2orf82Q6UX34 121 aa11.53□□□□□ -0.56
LRCH1-204ENST00000443945 C10orf25Q5T742 122 aa11.53□□□□□ -0.56
LRCH1-204ENST00000443945 SERTAD4-AS1Q5TG53 156 aa11.53□□□□□ -0.56
LRCH1-204ENST00000443945 SCGB1D4Q6XE38 83 aa11.53□□□□□ -0.56
LRCH1-204ENST00000443945 PRO0461Q9UI25 63 aa11.53□□□□□ -0.56
LRCH1-204ENST00000443945 SMIM1B2RUZ4 78 aa11.52□□□□□ -0.57
LRCH1-204ENST00000443945 SCGB1A1P11684 91 aa11.52□□□□□ -0.57
LRCH1-204ENST00000443945 SPACA4Q8TDM5 124 aa11.52□□□□□ -0.57
LRCH1-204ENST00000443945 C11orf86A6NJI1 115 aa11.51□□□□□ -0.57
LRCH1-204ENST00000443945 SRSF9Q13242 221 aaKnown RBP eCLIP11.51□□□□□ -0.57
LRCH1-204ENST00000443945 CIRBPQ14011 172 aaKnown RBP11.51□□□□□ -0.57
LRCH1-204ENST00000443945 PLEKHB2Q96CS7 222 aa11.51□□□□□ -0.57
LRCH1-204ENST00000443945 A0A087WYN8 130 aa11.51□□□□□ -0.57
LRCH1-204ENST00000443945 ZNF22P17026 224 aaPredicted RBP11.51□□□□□ -0.57
LRCH1-204ENST00000443945 Q8IZM0 81 aa11.51□□□□□ -0.57
LRCH1-204ENST00000443945 GAGE2BQ13066 116 aa11.5□□□□□ -0.57
LRCH1-204ENST00000443945 RPL18AQ02543 176 aaKnown RBP11.49□□□□□ -0.57
LRCH1-204ENST00000443945 PKIGQ9Y2B9 76 aa11.49□□□□□ -0.57
LRCH1-204ENST00000443945 LOC107984640A0A0U1RRK4 108 aa11.48□□□□□ -0.57
LRCH1-204ENST00000443945 TSPAN13O95857 204 aa11.48□□□□□ -0.57
LRCH1-204ENST00000443945 COX7B2Q8TF08 81 aa11.48□□□□□ -0.57
LRCH1-204ENST00000443945 C6orf48Q9UBA6 75 aa11.48□□□□□ -0.57
LRCH1-204ENST00000443945 GHRHP01286 108 aa11.48□□□□□ -0.57
LRCH1-204ENST00000443945 MYCBP2O75592 4640 aa11.47□□□□□ -0.57
LRCH1-204ENST00000443945 FLG2Q5D862 2391 aaPredicted RBP11.47□□□□□ -0.57
LRCH1-204ENST00000443945 VPREB1P12018 145 aa11.47□□□□□ -0.57
LRCH1-204ENST00000443945 LOC107984156A0A0G2JMH3 177 aa11.47□□□□□ -0.57
LRCH1-204ENST00000443945 PSMB2P49721 201 aa11.47□□□□□ -0.57
LRCH1-204ENST00000443945 SFTA2Q6UW10 78 aa11.47□□□□□ -0.57
LRCH1-204ENST00000443945 ARL17AQ8IVW1 177 aa11.47□□□□□ -0.57
LRCH1-204ENST00000443945 C9orf116Q5BN46 136 aaPredicted RBP11.46□□□□□ -0.57
LRCH1-204ENST00000443945 LINC00474Q9P2X8 69 aa11.46□□□□□ -0.57
LRCH1-204ENST00000443945 V9GYY9 64 aa11.46□□□□□ -0.57
LRCH1-204ENST00000443945 TRBV30A0A0K0K1B3 111 aa11.45□□□□□ -0.58
LRCH1-204ENST00000443945 INAFM2P0DMQ5 153 aa11.44□□□□□ -0.58
LRCH1-204ENST00000443945 CXCL5P42830 114 aa11.44□□□□□ -0.58
LRCH1-204ENST00000443945 PLAC8Q9NZF1 115 aa11.44□□□□□ -0.58
LRCH1-204ENST00000443945 SMCPP49901 116 aaPredicted RBP11.44□□□□□ -0.58
LRCH1-204ENST00000443945 GAGE2EQ4V326 116 aa11.44□□□□□ -0.58
LRCH1-204ENST00000443945 GAGE2DQ9UEU5 116 aa11.44□□□□□ -0.58
LRCH1-204ENST00000443945 PLA2G1BP04054 148 aaKnown RBP11.43□□□□□ -0.58
LRCH1-204ENST00000443945 IGLV5-39A0A0G2JS06 123 aa11.42□□□□□ -0.58
LRCH1-204ENST00000443945 KRTAP10-4P60372 401 aaPredicted RBP11.42□□□□□ -0.58
LRCH1-204ENST00000443945 Q6ZRP5 223 aa11.42□□□□□ -0.58
LRCH1-204ENST00000443945 LEPROTO15243 131 aa11.42□□□□□ -0.58
LRCH1-204ENST00000443945 TMEM223A0PJW6 202 aa11.41□□□□□ -0.58
LRCH1-204ENST00000443945 J3QQQ9 107 aa11.41□□□□□ -0.58
LRCH1-204ENST00000443945 TSPEAR-AS2P59090 65 aa11.41□□□□□ -0.58
LRCH1-204ENST00000443945 LGALS3P17931 250 aaKnown RBP11.4□□□□□ -0.58
LRCH1-204ENST00000443945 LYRM7Q5U5X0 104 aa11.4□□□□□ -0.58
LRCH1-204ENST00000443945 NDUFC2-KCTD14E9PQ53 114 aa11.4□□□□□ -0.58
LRCH1-204ENST00000443945 TLX1NBP0CAT3 122 aa11.39□□□□□ -0.59
LRCH1-204ENST00000443945 CFC1BP0CG36 223 aa11.39□□□□□ -0.59
LRCH1-204ENST00000443945 CFC1P0CG37 223 aa11.39□□□□□ -0.59
LRCH1-204ENST00000443945 RPL37AP61513 92 aaKnown RBP11.39□□□□□ -0.59
LRCH1-204ENST00000443945 A0A1W2PNN7 141 aa11.39□□□□□ -0.59
LRCH1-204ENST00000443945 SMIM20Q8N5G0 67 aa11.38□□□□□ -0.59
LRCH1-204ENST00000443945 TCL1BO95988 128 aa11.37□□□□□ -0.59
LRCH1-204ENST00000443945 ZNF625Q96I27 306 aaPredicted RBP11.37□□□□□ -0.59
LRCH1-204ENST00000443945 TRBV20-1A0A075B6N2 111 aa11.36□□□□□ -0.59
LRCH1-204ENST00000443945 FAM168BA1KXE4 195 aa11.36□□□□□ -0.59
LRCH1-204ENST00000443945 SCGB1C2P0DMR2 95 aa11.36□□□□□ -0.59
LRCH1-204ENST00000443945 PRO1854Q9UHT4 67 aa11.36□□□□□ -0.59
LRCH1-204ENST00000443945 PFN2P35080 140 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms