RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 KRTAP9-7A8MTY7 169 aa7.9□□□□□ -1.14
LINC00642-202ENST00000442515 MRPS36P82909 103 aaKnown RBP7.9□□□□□ -1.14
LINC00642-202ENST00000442515 SPANXA1Q9NS26 97 aa7.9□□□□□ -1.14
LINC00642-202ENST00000442515 RPL37AP8A6NKH3 93 aa7.89□□□□□ -1.15
LINC00642-202ENST00000442515 C3orf79P0CE67 100 aa7.89□□□□□ -1.15
LINC00642-202ENST00000442515 UBE2AP49459 152 aa7.89□□□□□ -1.15
LINC00642-202ENST00000442515 KRTDAPP60985 99 aa7.89□□□□□ -1.15
LINC00642-202ENST00000442515 C12orf57Q99622 126 aa7.89□□□□□ -1.15
LINC00642-202ENST00000442515 MAP1LC3CQ9BXW4 147 aa7.89□□□□□ -1.15
LINC00642-202ENST00000442515 MT1HP80294 61 aa7.88□□□□□ -1.15
LINC00642-202ENST00000442515 SYS1-DBNDD2H3BUS1 97 aa7.87□□□□□ -1.15
LINC00642-202ENST00000442515 ATP5LO75964 103 aa7.87□□□□□ -1.15
LINC00642-202ENST00000442515 PET117Q6UWS5 81 aa7.87□□□□□ -1.15
LINC00642-202ENST00000442515 LINC00167Q96N53 147 aa7.87□□□□□ -1.15
LINC00642-202ENST00000442515 C20orf202A1L168 122 aa7.86□□□□□ -1.15
LINC00642-202ENST00000442515 SCGB1D1O95968 90 aa7.86□□□□□ -1.15
LINC00642-202ENST00000442515 CFC1BP0CG36 223 aa7.86□□□□□ -1.15
LINC00642-202ENST00000442515 TOMM6Q96B49 74 aa7.86□□□□□ -1.15
LINC00642-202ENST00000442515 IFI27L1Q96BM0 104 aa7.86□□□□□ -1.15
LINC00642-202ENST00000442515 GAGE10A6NGK3 116 aa7.85□□□□□ -1.15
LINC00642-202ENST00000442515 KRTAP19-2Q3LHN2 52 aa7.85□□□□□ -1.15
LINC00642-202ENST00000442515 C2orf66Q6UXQ4 117 aa7.85□□□□□ -1.15
LINC00642-202ENST00000442515 C3orf22Q8N5N4 141 aa7.85□□□□□ -1.15
LINC00642-202ENST00000442515 CYSLTR1Q9Y271 337 aa7.85□□□□□ -1.15
LINC00642-202ENST00000442515 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.84□□□□□ -1.15
LINC00642-202ENST00000442515 PRSS2P07478 247 aa7.84□□□□□ -1.15
LINC00642-202ENST00000442515 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
LINC00642-202ENST00000442515 CKS1BP61024 79 aa7.84□□□□□ -1.15
LINC00642-202ENST00000442515 TOMM7Q9P0U1 55 aa7.84□□□□□ -1.15
LINC00642-202ENST00000442515 S100A12P80511 92 aa7.83□□□□□ -1.16
LINC00642-202ENST00000442515 LINC01545Q5VT33 79 aa7.83□□□□□ -1.16
LINC00642-202ENST00000442515 SPAG11AQ6PDA7 123 aa7.83□□□□□ -1.16
LINC00642-202ENST00000442515 TEX43Q6ZNM6 134 aa7.83□□□□□ -1.16
LINC00642-202ENST00000442515 ERASQ7Z444 233 aa7.83□□□□□ -1.16
LINC00642-202ENST00000442515 LINC01561Q8N1V8 128 aa7.83□□□□□ -1.16
LINC00642-202ENST00000442515 NPSP0C0P6 89 aa7.82□□□□□ -1.16
LINC00642-202ENST00000442515 TMEM141Q96I45 108 aa7.82□□□□□ -1.16
LINC00642-202ENST00000442515 SCGB3A1Q96QR1 104 aa7.82□□□□□ -1.16
LINC00642-202ENST00000442515 TIMM17AQ99595 171 aa7.82□□□□□ -1.16
LINC00642-202ENST00000442515 IGLV4-3A0A075B6K6 122 aa7.81□□□□□ -1.16
LINC00642-202ENST00000442515 KRTAP10-6P60371 365 aaPredicted RBP7.81□□□□□ -1.16
LINC00642-202ENST00000442515 PRLHP81277 87 aa7.81□□□□□ -1.16
LINC00642-202ENST00000442515 TRAV12-1A0A0B4J245 112 aa7.8□□□□□ -1.16
LINC00642-202ENST00000442515 IGIPA6NJ69 53 aa7.8□□□□□ -1.16
LINC00642-202ENST00000442515 C6orf226Q5I0X4 101 aa7.8□□□□□ -1.16
LINC00642-202ENST00000442515 Q6ZN92 141 aa7.8□□□□□ -1.16
LINC00642-202ENST00000442515 Q8IZM0 81 aa7.8□□□□□ -1.16
LINC00642-202ENST00000442515 PYGO1Q9Y3Y4 419 aa7.8□□□□□ -1.16
LINC00642-202ENST00000442515 SSPOA2VEC9 5147 aa7.8□□□□□ -1.16
LINC00642-202ENST00000442515 PAPPA-AS1Q5QFB9 102 aa7.79□□□□□ -1.16
LINC00642-202ENST00000442515 VAMP8Q9BV40 100 aa7.79□□□□□ -1.16
LINC00642-202ENST00000442515 IGKV2-28A0A075B6P5 120 aa7.78□□□□□ -1.16
LINC00642-202ENST00000442515 F8VRH5 84 aa7.78□□□□□ -1.16
LINC00642-202ENST00000442515 H0Y8G0 127 aa7.78□□□□□ -1.16
LINC00642-202ENST00000442515 IGKV2D-28P01615 120 aa7.78□□□□□ -1.16
LINC00642-202ENST00000442515 IGLV5-37A0A075B6J1 123 aa7.77□□□□□ -1.17
LINC00642-202ENST00000442515 USH2AO75445 5202 aa7.77□□□□□ -1.17
LINC00642-202ENST00000442515 TSTD3H0UI37 97 aa7.76□□□□□ -1.17
LINC00642-202ENST00000442515 PLNP26678 52 aa7.76□□□□□ -1.17
LINC00642-202ENST00000442515 PMVKQ15126 192 aa7.76□□□□□ -1.17
LINC00642-202ENST00000442515 C4orf48Q5BLP8 95 aa7.76□□□□□ -1.17
LINC00642-202ENST00000442515 FAM19A1Q7Z5A9 133 aa7.76□□□□□ -1.17
LINC00642-202ENST00000442515 NKAPP1Q8N9T2 125 aa7.76□□□□□ -1.17
LINC00642-202ENST00000442515 PLEKHB2Q96CS7 222 aa7.76□□□□□ -1.17
LINC00642-202ENST00000442515 FLGP20930 4061 aaPredicted RBP7.76□□□□□ -1.17
LINC00642-202ENST00000442515 HSBP1L1C9JCN9 74 aa7.75□□□□□ -1.17
LINC00642-202ENST00000442515 DPM2O94777 84 aa7.75□□□□□ -1.17
LINC00642-202ENST00000442515 XP32Q5T750 250 aa7.75□□□□□ -1.17
LINC00642-202ENST00000442515 ZC2HC1BQ5TFG8 222 aa7.75□□□□□ -1.17
LINC00642-202ENST00000442515 C2orf88Q9BSF0 95 aa7.75□□□□□ -1.17
LINC00642-202ENST00000442515 IGKCP01834 107 aa7.74□□□□□ -1.17
LINC00642-202ENST00000442515 ATOH7Q8N100 152 aa7.74□□□□□ -1.17
LINC00642-202ENST00000442515 DAND5Q8N907 189 aa7.74□□□□□ -1.17
LINC00642-202ENST00000442515 PMCHL2Q9BQD1 86 aa7.74□□□□□ -1.17
LINC00642-202ENST00000442515 PAM16Q9Y3D7 125 aa7.74□□□□□ -1.17
LINC00642-202ENST00000442515 CHTOPQ9Y3Y2 248 aaKnown RBP7.74□□□□□ -1.17
LINC00642-202ENST00000442515 SPATA45Q537H7 98 aa7.73□□□□□ -1.17
LINC00642-202ENST00000442515 Q8NBF4 154 aa7.73□□□□□ -1.17
LINC00642-202ENST00000442515 AMELXQ99217 191 aa7.73□□□□□ -1.17
LINC00642-202ENST00000442515 TMEM126AQ9H061 195 aa7.73□□□□□ -1.17
LINC00642-202ENST00000442515 CST9LQ9H4G1 147 aa7.73□□□□□ -1.17
LINC00642-202ENST00000442515 TMEM238C9JI98 176 aa7.72□□□□□ -1.17
LINC00642-202ENST00000442515 CXCL5P42830 114 aa7.72□□□□□ -1.17
LINC00642-202ENST00000442515 VCX2Q9H322 139 aa7.72□□□□□ -1.17
LINC00642-202ENST00000442515 CDKN2A-AS1Q9UH64 79 aa7.71□□□□□ -1.18
LINC00642-202ENST00000442515 NDUFA12Q9UI09 145 aa7.71□□□□□ -1.18
LINC00642-202ENST00000442515 SPRR4Q96PI1 79 aa7.7□□□□□ -1.18
LINC00642-202ENST00000442515 PRO1933Q9H354 126 aa7.7□□□□□ -1.18
LINC00642-202ENST00000442515 M0R378 163 aa7.69□□□□□ -1.18
LINC00642-202ENST00000442515 SPINK1P00995 79 aa7.69□□□□□ -1.18
LINC00642-202ENST00000442515 IGLC3P0DOY3 106 aa7.69□□□□□ -1.18
LINC00642-202ENST00000442515 FAM19A3Q7Z5A8 133 aa7.69□□□□□ -1.18
LINC00642-202ENST00000442515 HIGD2AQ9BW72 106 aa7.69□□□□□ -1.18
LINC00642-202ENST00000442515 HERVK_113P63121 156 aa7.68□□□□□ -1.18
LINC00642-202ENST00000442515 MIEN1Q9BRT3 115 aa7.68□□□□□ -1.18
LINC00642-202ENST00000442515 UQCR10Q9UDW1 63 aa7.68□□□□□ -1.18
LINC00642-202ENST00000442515 C11orf86A6NJI1 115 aa7.67□□□□□ -1.18
LINC00642-202ENST00000442515 PCP4L1A6NKN8 68 aa7.67□□□□□ -1.18
LINC00642-202ENST00000442515 DDTP30046 118 aa7.67□□□□□ -1.18
LINC00642-202ENST00000442515 SEC11AP67812 179 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms