RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 NDUFA6P56556 154 aa11.47□□□□□ -0.57
UBE2F-215ENST00000441728 C3orf22Q8N5N4 141 aa11.47□□□□□ -0.57
UBE2F-215ENST00000441728 ERG28Q9UKR5 140 aa11.47□□□□□ -0.57
UBE2F-215ENST00000441728 PLEKHB2Q96CS7 222 aa11.46□□□□□ -0.57
UBE2F-215ENST00000441728 FAT4Q6V0I7 4981 aa11.45□□□□□ -0.58
UBE2F-215ENST00000441728 COX17Q14061 63 aa11.45□□□□□ -0.58
UBE2F-215ENST00000441728 M0R378 163 aa11.44□□□□□ -0.58
UBE2F-215ENST00000441728 FP248Q71RG6 208 aaPredicted RBP11.44□□□□□ -0.58
UBE2F-215ENST00000441728 ZNF706Q9Y5V0 76 aaPredicted RBP11.44□□□□□ -0.58
UBE2F-215ENST00000441728 ZNF625Q96I27 306 aaPredicted RBP11.43□□□□□ -0.58
UBE2F-215ENST00000441728 TRAPPC1Q9Y5R8 145 aa11.43□□□□□ -0.58
UBE2F-215ENST00000441728 SFTA2Q6UW10 78 aa11.41□□□□□ -0.58
UBE2F-215ENST00000441728 IGLC3P0DOY3 106 aa11.4□□□□□ -0.58
UBE2F-215ENST00000441728 LINC01547P58512 204 aaPredicted RBP11.4□□□□□ -0.58
UBE2F-215ENST00000441728 IGLV5-39A0A0G2JS06 123 aa11.39□□□□□ -0.59
UBE2F-215ENST00000441728 YPEL4Q96NS1 127 aa11.38□□□□□ -0.59
UBE2F-215ENST00000441728 SPRR4Q96PI1 79 aa11.38□□□□□ -0.59
UBE2F-215ENST00000441728 ZNF22P17026 224 aaPredicted RBP11.37□□□□□ -0.59
UBE2F-215ENST00000441728 LINC00158P58513 81 aa11.37□□□□□ -0.59
UBE2F-215ENST00000441728 ATP6V1G1O75348 118 aa11.36□□□□□ -0.59
UBE2F-215ENST00000441728 TMEM170BQ5T4T1 132 aa11.36□□□□□ -0.59
UBE2F-215ENST00000441728 C18orf32Q8TCD1 76 aa11.36□□□□□ -0.59
UBE2F-215ENST00000441728 LINC00614P0C842 121 aa11.35□□□□□ -0.59
UBE2F-215ENST00000441728 Q8NBF4 154 aa11.35□□□□□ -0.59
UBE2F-215ENST00000441728 NDUFA12Q9UI09 145 aa11.35□□□□□ -0.59
UBE2F-215ENST00000441728 MUC17Q685J3 4493 aa11.34□□□□□ -0.59
UBE2F-215ENST00000441728 DAND5Q8N907 189 aa11.34□□□□□ -0.59
UBE2F-215ENST00000441728 SEC61BP60468 96 aaKnown RBP11.33□□□□□ -0.6
UBE2F-215ENST00000441728 URB1-AS1Q96HZ7 61 aa11.32□□□□□ -0.6
UBE2F-215ENST00000441728 A0A0U1RRA0 63 aa11.31□□□□□ -0.6
UBE2F-215ENST00000441728 SPINK1P00995 79 aa11.31□□□□□ -0.6
UBE2F-215ENST00000441728 S100A12P80511 92 aa11.31□□□□□ -0.6
UBE2F-215ENST00000441728 KRTAP13-3Q3SY46 172 aa11.31□□□□□ -0.6
UBE2F-215ENST00000441728 ASB16-AS1Q495Z4 193 aa11.31□□□□□ -0.6
UBE2F-215ENST00000441728 Q8NDZ9 215 aa11.31□□□□□ -0.6
UBE2F-215ENST00000441728 A0A096LNJ9 63 aa11.3□□□□□ -0.6
UBE2F-215ENST00000441728 ETDCA0A1B0GVM5 59 aa11.3□□□□□ -0.6
UBE2F-215ENST00000441728 PRYO14603 147 aa11.3□□□□□ -0.6
UBE2F-215ENST00000441728 HBDP02042 147 aa11.3□□□□□ -0.6
UBE2F-215ENST00000441728 BAGE3Q86Y29 109 aa11.3□□□□□ -0.6
UBE2F-215ENST00000441728 SLC7A5P1Q8MH63 180 aa11.3□□□□□ -0.6
UBE2F-215ENST00000441728 C11orf86A6NJI1 115 aa11.28□□□□□ -0.6
UBE2F-215ENST00000441728 SMCR5Q8TEV8 140 aa11.28□□□□□ -0.6
UBE2F-215ENST00000441728 FAM19A2Q8N3H0 131 aa11.27□□□□□ -0.61
UBE2F-215ENST00000441728 NCR3O14931 201 aa11.26□□□□□ -0.61
UBE2F-215ENST00000441728 MEIG1Q5JSS6 88 aa11.26□□□□□ -0.61
UBE2F-215ENST00000441728 BOD1L2Q8IYS8 172 aa11.26□□□□□ -0.61
UBE2F-215ENST00000441728 CHCHD1Q96BP2 118 aaKnown RBP11.25□□□□□ -0.61
UBE2F-215ENST00000441728 PMCHL1Q16048 86 aa11.24□□□□□ -0.61
UBE2F-215ENST00000441728 GAGE2AQ6NT46 116 aa11.24□□□□□ -0.61
UBE2F-215ENST00000441728 CHTOPQ9Y3Y2 248 aaKnown RBP11.24□□□□□ -0.61
UBE2F-215ENST00000441728 IGLV9-49A0A0B4J1Y8 123 aa11.22□□□□□ -0.61
UBE2F-215ENST00000441728 SMIM13P0DJ93 91 aa11.22□□□□□ -0.61
UBE2F-215ENST00000441728 MOBPQ13875 183 aa11.21□□□□□ -0.61
UBE2F-215ENST00000441728 LINC00587B1AMM8 73 aa11.2□□□□□ -0.62
UBE2F-215ENST00000441728 KCNQ1DNQ9H478 68 aa11.2□□□□□ -0.62
UBE2F-215ENST00000441728 TRGC2P03986 189 aa11.19□□□□□ -0.62
UBE2F-215ENST00000441728 MIR7-3HGQ8N6C7 128 aa11.19□□□□□ -0.62
UBE2F-215ENST00000441728 MAP1LC3CQ9BXW4 147 aa11.19□□□□□ -0.62
UBE2F-215ENST00000441728 SLC25A20O43772 301 aa11.18□□□□□ -0.62
UBE2F-215ENST00000441728 SPRR1AP35321 89 aa11.18□□□□□ -0.62
UBE2F-215ENST00000441728 HERV-K104P63124 156 aa11.18□□□□□ -0.62
UBE2F-215ENST00000441728 SSBP3-AS1Q7Z2R9 100 aa11.18□□□□□ -0.62
UBE2F-215ENST00000441728 TRBV10-3A0A0K0K1G6 114 aa11.17□□□□□ -0.62
UBE2F-215ENST00000441728 TMEM223A0PJW6 202 aa11.17□□□□□ -0.62
UBE2F-215ENST00000441728 RPS29P62273 56 aaKnown RBP11.17□□□□□ -0.62
UBE2F-215ENST00000441728 LINC00483Q53H64 154 aa11.17□□□□□ -0.62
UBE2F-215ENST00000441728 COLCA2A8K830 154 aa11.16□□□□□ -0.62
UBE2F-215ENST00000441728 LCE2DQ5TA82 110 aaPredicted RBP11.16□□□□□ -0.62
UBE2F-215ENST00000441728 TRAV12-1A0A0B4J245 112 aa11.15□□□□□ -0.62
UBE2F-215ENST00000441728 HSBP1O75506 76 aa11.15□□□□□ -0.62
UBE2F-215ENST00000441728 Q8N377 158 aa11.15□□□□□ -0.62
UBE2F-215ENST00000441728 IFI27L1Q96BM0 104 aa11.15□□□□□ -0.62
UBE2F-215ENST00000441728 C9orf153Q5TBE3 101 aa11.13□□□□□ -0.63
UBE2F-215ENST00000441728 KRTAP4-1Q9BYQ7 146 aa11.13□□□□□ -0.63
UBE2F-215ENST00000441728 MYMXA0A1B0GTQ4 84 aa11.12□□□□□ -0.63
UBE2F-215ENST00000441728 KRTAP4-16G5E9R7 235 aaPredicted RBP11.12□□□□□ -0.63
UBE2F-215ENST00000441728 B5MCH6 92 aa11.11□□□□□ -0.63
UBE2F-215ENST00000441728 DDTP30046 118 aa11.11□□□□□ -0.63
UBE2F-215ENST00000441728 SERF1AO75920 110 aa11.09□□□□□ -0.63
UBE2F-215ENST00000441728 LINC00310P59036 64 aa11.09□□□□□ -0.63
UBE2F-215ENST00000441728 MIEN1Q9BRT3 115 aa11.09□□□□□ -0.63
UBE2F-215ENST00000441728 ERC2-IT1O76042 136 aa11.08□□□□□ -0.64
UBE2F-215ENST00000441728 XP32Q5T750 250 aa11.08□□□□□ -0.64
UBE2F-215ENST00000441728 CRCT1Q9UGL9 99 aa11.08□□□□□ -0.64
UBE2F-215ENST00000441728 LEPROTL1O95214 131 aa11.07□□□□□ -0.64
UBE2F-215ENST00000441728 JOSD1Q15040 202 aaPredicted RBP11.07□□□□□ -0.64
UBE2F-215ENST00000441728 S100A7L2Q5SY68 101 aa11.07□□□□□ -0.64
UBE2F-215ENST00000441728 Q6ZRX8 168 aa11.06□□□□□ -0.64
UBE2F-215ENST00000441728 TRBV10-2A0A0K0K1G8 114 aa11.05□□□□□ -0.64
UBE2F-215ENST00000441728 HSPB8Q9UJY1 196 aa11.05□□□□□ -0.64
UBE2F-215ENST00000441728 H0Y8G0 127 aa11.03□□□□□ -0.64
UBE2F-215ENST00000441728 Q9BRP9 147 aa11.03□□□□□ -0.64
UBE2F-215ENST00000441728 SPANXB1Q9NS25 103 aaPredicted RBP11.03□□□□□ -0.64
UBE2F-215ENST00000441728 HINT1P49773 126 aaPredicted RBP11□□□□□ -0.65
UBE2F-215ENST00000441728 LIMD2Q9BT23 127 aa11□□□□□ -0.65
UBE2F-215ENST00000441728 TRAV23DV6A0A075B6W5 121 aa10.99□□□□□ -0.65
UBE2F-215ENST00000441728 LEPROTO15243 131 aa10.98□□□□□ -0.65
UBE2F-215ENST00000441728 HIST1H2BKO60814 126 aa10.98□□□□□ -0.65
UBE2F-215ENST00000441728 HIST1H2BJP06899 126 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms