RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 C16orf90A8MZG2 172 aa13.5□□□□□ -0.25
VPS13B-204ENST00000441350 GAGE2BQ13066 116 aa13.5□□□□□ -0.25
VPS13B-204ENST00000441350 A0A096LNI7 61 aa13.5□□□□□ -0.25
VPS13B-204ENST00000441350 C9orf129Q5T035 196 aaKnown RBP13.49□□□□□ -0.25
VPS13B-204ENST00000441350 CEND1Q8N111 149 aa13.48□□□□□ -0.25
VPS13B-204ENST00000441350 COPS9Q8WXC6 57 aa13.48□□□□□ -0.25
VPS13B-204ENST00000441350 PCP4L1A6NKN8 68 aa13.47□□□□□ -0.25
VPS13B-204ENST00000441350 DNAH5Q8TE73 4624 aa13.47□□□□□ -0.25
VPS13B-204ENST00000441350 IGKV2-24A0A0C4DH68 120 aa13.45□□□□□ -0.26
VPS13B-204ENST00000441350 CHTF8P0CG12 524 aa13.44□□□□□ -0.26
VPS13B-204ENST00000441350 RPL24P83731 157 aaKnown RBP13.44□□□□□ -0.26
VPS13B-204ENST00000441350 Q8NDZ9 215 aa13.43□□□□□ -0.26
VPS13B-204ENST00000441350 LINC00474Q9P2X8 69 aa13.43□□□□□ -0.26
VPS13B-204ENST00000441350 FXYD2P54710 66 aa13.42□□□□□ -0.26
VPS13B-204ENST00000441350 A4D1N5 150 aa13.42□□□□□ -0.26
VPS13B-204ENST00000441350 PANO1I0J062 215 aa13.42□□□□□ -0.26
VPS13B-204ENST00000441350 BVES-AS1Q5T3Y7 98 aa13.42□□□□□ -0.26
VPS13B-204ENST00000441350 PLA2G2DQ9UNK4 145 aa13.42□□□□□ -0.26
VPS13B-204ENST00000441350 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.42□□□□□ -0.26
VPS13B-204ENST00000441350 NDUFC2O95298 119 aa13.41□□□□□ -0.26
VPS13B-204ENST00000441350 HINT1P49773 126 aaPredicted RBP13.4□□□□□ -0.26
VPS13B-204ENST00000441350 KRTAP10-1P60331 282 aa13.4□□□□□ -0.26
VPS13B-204ENST00000441350 SPACA4Q8TDM5 124 aa13.4□□□□□ -0.26
VPS13B-204ENST00000441350 FAM168BA1KXE4 195 aa13.39□□□□□ -0.27
VPS13B-204ENST00000441350 M0R143 59 aa13.39□□□□□ -0.27
VPS13B-204ENST00000441350 VPREB1P12018 145 aa13.39□□□□□ -0.27
VPS13B-204ENST00000441350 KRTAP7-1Q8IUC3 87 aa13.39□□□□□ -0.27
VPS13B-204ENST00000441350 PKHD1P08F94 4074 aa13.39□□□□□ -0.27
VPS13B-204ENST00000441350 SERTAD4-AS1Q5TG53 156 aa13.39□□□□□ -0.27
VPS13B-204ENST00000441350 TMEM238LA0A1B0GVL6 79 aa13.37□□□□□ -0.27
VPS13B-204ENST00000441350 A6NJY4 79 aa13.37□□□□□ -0.27
VPS13B-204ENST00000441350 PRR3P79522 188 aaKnown RBP13.37□□□□□ -0.27
VPS13B-204ENST00000441350 IGKV2-28A0A075B6P5 120 aa13.36□□□□□ -0.27
VPS13B-204ENST00000441350 A0A1W2PNN7 141 aa13.36□□□□□ -0.27
VPS13B-204ENST00000441350 IGKV2D-28P01615 120 aa13.36□□□□□ -0.27
VPS13B-204ENST00000441350 IGLV5-37A0A075B6J1 123 aa13.35□□□□□ -0.27
VPS13B-204ENST00000441350 Q6ZSA8 131 aa13.35□□□□□ -0.27
VPS13B-204ENST00000441350 EPM2AB3EWF7 344 aa13.34□□□□□ -0.27
VPS13B-204ENST00000441350 CFC1BP0CG36 223 aa13.34□□□□□ -0.27
VPS13B-204ENST00000441350 CFC1P0CG37 223 aa13.34□□□□□ -0.27
VPS13B-204ENST00000441350 FAM30AQ9NZY2 134 aa13.34□□□□□ -0.27
VPS13B-204ENST00000441350 DNAH8Q96JB1 4490 aa13.34□□□□□ -0.27
VPS13B-204ENST00000441350 TRBV10-2A0A0K0K1G8 114 aa13.33□□□□□ -0.28
VPS13B-204ENST00000441350 FAM19A5Q7Z5A7 132 aaPredicted RBP13.33□□□□□ -0.28
VPS13B-204ENST00000441350 NCR3O14931 201 aa13.32□□□□□ -0.28
VPS13B-204ENST00000441350 DPH3Q96FX2 82 aa13.32□□□□□ -0.28
VPS13B-204ENST00000441350 A0A087WYN8 130 aa13.31□□□□□ -0.28
VPS13B-204ENST00000441350 A0A1B0GWB2 263 aa13.31□□□□□ -0.28
VPS13B-204ENST00000441350 NHP2Q9NX24 153 aaKnown RBP13.31□□□□□ -0.28
VPS13B-204ENST00000441350 A0A0B4J2C4 111 aa13.31□□□□□ -0.28
VPS13B-204ENST00000441350 LINC00337Q8N6G1 96 aa13.31□□□□□ -0.28
VPS13B-204ENST00000441350 SNHG12Q9BXW3 62 aa13.31□□□□□ -0.28
VPS13B-204ENST00000441350 C22orf24Q9Y442 160 aa13.31□□□□□ -0.28
VPS13B-204ENST00000441350 M0R378 163 aa13.3□□□□□ -0.28
VPS13B-204ENST00000441350 BATFQ16520 125 aa13.3□□□□□ -0.28
VPS13B-204ENST00000441350 NKAPP1Q8N9T2 125 aa13.3□□□□□ -0.28
VPS13B-204ENST00000441350 PLAC8Q9NZF1 115 aa13.3□□□□□ -0.28
VPS13B-204ENST00000441350 DYNC1H1Q14204 4646 aaKnown RBP13.28□□□□□ -0.28
VPS13B-204ENST00000441350 A6NDN8 102 aa13.28□□□□□ -0.28
VPS13B-204ENST00000441350 C7orf33Q8WU49 177 aa13.28□□□□□ -0.28
VPS13B-204ENST00000441350 LRP1BQ9NZR2 4599 aa13.27□□□□□ -0.29
VPS13B-204ENST00000441350 TRAV13-2A0A0B4J235 113 aa13.27□□□□□ -0.29
VPS13B-204ENST00000441350 K7ERJ3 54 aa13.27□□□□□ -0.29
VPS13B-204ENST00000441350 M0QXV9 152 aa13.27□□□□□ -0.29
VPS13B-204ENST00000441350 MRPL55Q7Z7F7 128 aaKnown RBP13.26□□□□□ -0.29
VPS13B-204ENST00000441350 RAB37Q96AX2 223 aa13.26□□□□□ -0.29
VPS13B-204ENST00000441350 PRO1854Q9UHT4 67 aa13.25□□□□□ -0.29
VPS13B-204ENST00000441350 IGLV6-57P01721 117 aa13.24□□□□□ -0.29
VPS13B-204ENST00000441350 LINC00167Q96N53 147 aa13.24□□□□□ -0.29
VPS13B-204ENST00000441350 S100A7L2Q5SY68 101 aa13.24□□□□□ -0.29
VPS13B-204ENST00000441350 OR13C6PQ8NH95 151 aa13.24□□□□□ -0.29
VPS13B-204ENST00000441350 CIRBP-AS1Q8TBR5 109 aa13.24□□□□□ -0.29
VPS13B-204ENST00000441350 GAGE10A6NGK3 116 aa13.23□□□□□ -0.29
VPS13B-204ENST00000441350 SCXQ7RTU7 201 aa13.23□□□□□ -0.29
VPS13B-204ENST00000441350 PHF5AQ7RTV0 110 aaKnown RBP13.23□□□□□ -0.29
VPS13B-204ENST00000441350 TMEM126AQ9H061 195 aa13.23□□□□□ -0.29
VPS13B-204ENST00000441350 TRBV10-3A0A0K0K1G6 114 aa13.22□□□□□ -0.29
VPS13B-204ENST00000441350 RPL13AP40429 203 aaKnown RBP13.22□□□□□ -0.29
VPS13B-204ENST00000441350 LBHQ53QV2 105 aaPredicted RBP13.22□□□□□ -0.29
VPS13B-204ENST00000441350 IGLV1-50A0A075B6I6 118 aa13.19□□□□□ -0.3
VPS13B-204ENST00000441350 RPL37AP8A6NKH3 93 aa13.19□□□□□ -0.3
VPS13B-204ENST00000441350 H7C2G1 150 aa13.17□□□□□ -0.3
VPS13B-204ENST00000441350 HAMPP81172 84 aa13.17□□□□□ -0.3
VPS13B-204ENST00000441350 KCNQ1DNQ9H478 68 aa13.17□□□□□ -0.3
VPS13B-204ENST00000441350 COL5A1-AS1Q5SY13 56 aa13.16□□□□□ -0.3
VPS13B-204ENST00000441350 KRTAP11-1Q8IUC1 163 aa13.16□□□□□ -0.3
VPS13B-204ENST00000441350 XGP55808 180 aa13.15□□□□□ -0.3
VPS13B-204ENST00000441350 SMIM11BQ8TCY0 68 aa13.15□□□□□ -0.3
VPS13B-204ENST00000441350 TSPAN13O95857 204 aa13.14□□□□□ -0.31
VPS13B-204ENST00000441350 TRAV23DV6A0A075B6W5 121 aa13.13□□□□□ -0.31
VPS13B-204ENST00000441350 UBE2BP63146 152 aa13.13□□□□□ -0.31
VPS13B-204ENST00000441350 TAX1BP3O14907 124 aa13.13□□□□□ -0.31
VPS13B-204ENST00000441350 CBY1Q9Y3M2 126 aa13.13□□□□□ -0.31
VPS13B-204ENST00000441350 PRYO14603 147 aa13.12□□□□□ -0.31
VPS13B-204ENST00000441350 RPL28P46779 137 aaKnown RBP13.12□□□□□ -0.31
VPS13B-204ENST00000441350 Q1RN00 199 aa13.12□□□□□ -0.31
VPS13B-204ENST00000441350 APOBP04114 4563 aaKnown RBP13.11□□□□□ -0.31
VPS13B-204ENST00000441350 ZNF73O43830 326 aaPredicted RBP13.09□□□□□ -0.31
VPS13B-204ENST00000441350 SPRR1AP35321 89 aa13.09□□□□□ -0.31
VPS13B-204ENST00000441350 EPPK1P58107 5090 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1814.6 ms