RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SEC61GP60059 68 aa11.65□□□□□ -0.54
PMS1-213ENST00000441310 C6orf226Q5I0X4 101 aa11.65□□□□□ -0.54
PMS1-213ENST00000441310 TENM1Q9UKZ4 2725 aa11.64□□□□□ -0.55
PMS1-213ENST00000441310 INSP01308 110 aa11.64□□□□□ -0.55
PMS1-213ENST00000441310 LINC00482Q8N8I6 264 aa11.64□□□□□ -0.55
PMS1-213ENST00000441310 TM2D3Q9BRN9 247 aa11.64□□□□□ -0.55
PMS1-213ENST00000441310 IGLV4-60A0A075B6I1 120 aa11.64□□□□□ -0.55
PMS1-213ENST00000441310 LOC100131303A0A0U1RQF7 123 aa11.64□□□□□ -0.55
PMS1-213ENST00000441310 SCXQ7RTU7 201 aa11.64□□□□□ -0.55
PMS1-213ENST00000441310 NANOS2P60321 138 aaKnown RBP11.63□□□□□ -0.55
PMS1-213ENST00000441310 LAMTOR3Q9UHA4 124 aa11.63□□□□□ -0.55
PMS1-213ENST00000441310 IGHV3OR16-9A0A0B4J2B5 98 aa11.62□□□□□ -0.55
PMS1-213ENST00000441310 Q6ZVQ6 151 aa11.62□□□□□ -0.55
PMS1-213ENST00000441310 Q6ZQT0 140 aa11.62□□□□□ -0.55
PMS1-213ENST00000441310 Q8N3U1 123 aa11.61□□□□□ -0.55
PMS1-213ENST00000441310 TRBV10-1A0A0K0K1A3 114 aa11.61□□□□□ -0.55
PMS1-213ENST00000441310 FAM229BQ4G0N7 80 aa11.6□□□□□ -0.55
PMS1-213ENST00000441310 C1orf158Q8N1D5 194 aa11.6□□□□□ -0.55
PMS1-213ENST00000441310 A8MTW9 85 aa11.6□□□□□ -0.55
PMS1-213ENST00000441310 BCE1O60756 84 aa11.6□□□□□ -0.55
PMS1-213ENST00000441310 C6orf99Q4VX62 202 aa11.59□□□□□ -0.55
PMS1-213ENST00000441310 MIFP14174 115 aa11.58□□□□□ -0.56
PMS1-213ENST00000441310 A0A087WZ39 114 aa11.58□□□□□ -0.56
PMS1-213ENST00000441310 TEP1Q99973 2627 aaKnown RBP11.57□□□□□ -0.56
PMS1-213ENST00000441310 INAFM1C9JVW0 142 aa11.56□□□□□ -0.56
PMS1-213ENST00000441310 KRTAP10-3P60369 221 aa11.56□□□□□ -0.56
PMS1-213ENST00000441310 F8P00451 2351 aa11.56□□□□□ -0.56
PMS1-213ENST00000441310 NOP10Q9NPE3 64 aaKnown RBP11.55□□□□□ -0.56
PMS1-213ENST00000441310 NDUFC1O43677 76 aa11.54□□□□□ -0.56
PMS1-213ENST00000441310 SPATA3Q8NHX4 192 aa11.54□□□□□ -0.56
PMS1-213ENST00000441310 TRBV7-4A0A0J9YYF1 115 aa11.54□□□□□ -0.56
PMS1-213ENST00000441310 CLPSL2Q6UWE3 100 aa11.53□□□□□ -0.56
PMS1-213ENST00000441310 NREPQ16612 68 aa11.52□□□□□ -0.56
PMS1-213ENST00000441310 ZNF561-AS1K7EIQ3 104 aa11.52□□□□□ -0.57
PMS1-213ENST00000441310 GIG44P09565 113 aaPredicted RBP11.52□□□□□ -0.57
PMS1-213ENST00000441310 TRGV2A0A075B6R0 118 aa11.52□□□□□ -0.57
PMS1-213ENST00000441310 IGLV1-51P01701 117 aa11.52□□□□□ -0.57
PMS1-213ENST00000441310 TMEM254Q8TBM7 123 aa11.52□□□□□ -0.57
PMS1-213ENST00000441310 LOC110117498A0A087WWA1 95 aa11.5□□□□□ -0.57
PMS1-213ENST00000441310 ATP5EP56381 51 aaPredicted RBP11.5□□□□□ -0.57
PMS1-213ENST00000441310 LINC00575Q6W349 94 aa11.5□□□□□ -0.57
PMS1-213ENST00000441310 LINC00959A0A1B0GUT2 108 aa11.5□□□□□ -0.57
PMS1-213ENST00000441310 CXCL6P80162 114 aa11.49□□□□□ -0.57
PMS1-213ENST00000441310 C9orf116Q5BN46 136 aaPredicted RBP11.49□□□□□ -0.57
PMS1-213ENST00000441310 C6orf223Q8N319 242 aa11.48□□□□□ -0.57
PMS1-213ENST00000441310 IL17DQ8TAD2 202 aa11.48□□□□□ -0.57
PMS1-213ENST00000441310 C19orf73Q9NVV2 129 aa11.48□□□□□ -0.57
PMS1-213ENST00000441310 TRGV4A0A0C4DH28 118 aa11.48□□□□□ -0.57
PMS1-213ENST00000441310 TRBV6-8A0A0A6YYG3 113 aa11.47□□□□□ -0.57
PMS1-213ENST00000441310 Q6ZQY7 126 aa11.47□□□□□ -0.57
PMS1-213ENST00000441310 Q8NDZ9 215 aa11.47□□□□□ -0.57
PMS1-213ENST00000441310 Q8N9L7 120 aa11.47□□□□□ -0.57
PMS1-213ENST00000441310 BPY2O14599 106 aa11.47□□□□□ -0.57
PMS1-213ENST00000441310 TRRAPQ9Y4A5 3859 aa11.46□□□□□ -0.57
PMS1-213ENST00000441310 DAD1P61803 113 aa11.44□□□□□ -0.58
PMS1-213ENST00000441310 Q8IZM0 81 aa11.44□□□□□ -0.58
PMS1-213ENST00000441310 MUC7Q8TAX7 377 aa11.44□□□□□ -0.58
PMS1-213ENST00000441310 ESRGQ1W209 222 aa11.44□□□□□ -0.58
PMS1-213ENST00000441310 FUSP35637 526 aaKnown RBP eCLIP11.43□□□□□ -0.58
PMS1-213ENST00000441310 LRCOL1A6NCL2 159 aa11.42□□□□□ -0.58
PMS1-213ENST00000441310 PRYO14603 147 aa11.42□□□□□ -0.58
PMS1-213ENST00000441310 DEFB130BP0DP73 79 aa11.42□□□□□ -0.58
PMS1-213ENST00000441310 DEFB130AP0DP74 79 aa11.42□□□□□ -0.58
PMS1-213ENST00000441310 PLAC8L1A1L4L8 177 aa11.41□□□□□ -0.58
PMS1-213ENST00000441310 LINC00269Q8N2A0 174 aa11.41□□□□□ -0.58
PMS1-213ENST00000441310 STAB1Q9NY15 2570 aa11.4□□□□□ -0.58
PMS1-213ENST00000441310 CSNK1G2-AS1Q8NCQ2 148 aa11.39□□□□□ -0.59
PMS1-213ENST00000441310 DEFB4AO15263 64 aa11.38□□□□□ -0.59
PMS1-213ENST00000441310 PDE6GP18545 87 aa11.38□□□□□ -0.59
PMS1-213ENST00000441310 CMC4P56277 68 aaPredicted RBP11.38□□□□□ -0.59
PMS1-213ENST00000441310 C9orf66Q5T8R8 295 aa11.38□□□□□ -0.59
PMS1-213ENST00000441310 HIGD2AQ9BW72 106 aa11.38□□□□□ -0.59
PMS1-213ENST00000441310 IGLV10-54A0A075B6I4 117 aa11.38□□□□□ -0.59
PMS1-213ENST00000441310 C16orf74Q96GX8 76 aa11.37□□□□□ -0.59
PMS1-213ENST00000441310 MAST4O15021 2626 aa11.36□□□□□ -0.59
PMS1-213ENST00000441310 A0A096LPF7 62 aa11.35□□□□□ -0.59
PMS1-213ENST00000441310 Q6ZTC4 211 aa11.35□□□□□ -0.59
PMS1-213ENST00000441310 KIAA0087Q14695 138 aa11.35□□□□□ -0.59
PMS1-213ENST00000441310 CD164L2Q6UWJ8 174 aa11.34□□□□□ -0.59
PMS1-213ENST00000441310 PMAIP1Q13794 54 aa11.33□□□□□ -0.59
PMS1-213ENST00000441310 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.33□□□□□ -0.59
PMS1-213ENST00000441310 COX17Q14061 63 aa11.33□□□□□ -0.6
PMS1-213ENST00000441310 ERC2-IT1O76042 136 aa11.32□□□□□ -0.6
PMS1-213ENST00000441310 OCR1Q9BZK8 76 aa11.32□□□□□ -0.6
PMS1-213ENST00000441310 DEFB135Q30KP9 77 aa11.31□□□□□ -0.6
PMS1-213ENST00000441310 IGKV4-1P06312 121 aa11.3□□□□□ -0.6
PMS1-213ENST00000441310 C10orf25Q5T742 122 aa11.3□□□□□ -0.6
PMS1-213ENST00000441310 NOTCH1P46531 2555 aa11.29□□□□□ -0.6
PMS1-213ENST00000441310 CELA1Q9UNI1 258 aa11.29□□□□□ -0.6
PMS1-213ENST00000441310 UNQ6190/PRO20217Q6UXQ8 127 aa11.29□□□□□ -0.6
PMS1-213ENST00000441310 GYPEP15421 78 aa11.28□□□□□ -0.6
PMS1-213ENST00000441310 PSPHP1O15172 72 aa11.28□□□□□ -0.6
PMS1-213ENST00000441310 CHCHD10Q8WYQ3 142 aaPredicted RBP11.28□□□□□ -0.6
PMS1-213ENST00000441310 PKD1L1Q8TDX9 2849 aa11.28□□□□□ -0.6
PMS1-213ENST00000441310 PRR15Q8IV56 129 aa11.27□□□□□ -0.61
PMS1-213ENST00000441310 FAM30AQ9NZY2 134 aa11.27□□□□□ -0.61
PMS1-213ENST00000441310 IGLV6-57P01721 117 aa11.26□□□□□ -0.61
PMS1-213ENST00000441310 DIRC1Q969H9 104 aa11.26□□□□□ -0.61
PMS1-213ENST00000441310 X6R8D5 127 aa11.26□□□□□ -0.61
PMS1-213ENST00000441310 C3orf84H3BNL1 204 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms