RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 TMEM170BQ5T4T1 132 aa9.78□□□□□ -0.84
FAM20B-202ENST00000440702 A0A0U1RRA0 63 aa9.77□□□□□ -0.85
FAM20B-202ENST00000440702 LINC00158P58513 81 aa9.77□□□□□ -0.85
FAM20B-202ENST00000440702 SPRR4Q96PI1 79 aa9.77□□□□□ -0.85
FAM20B-202ENST00000440702 COX19Q49B96 90 aa9.76□□□□□ -0.85
FAM20B-202ENST00000440702 UQCC3Q6UW78 93 aa9.76□□□□□ -0.85
FAM20B-202ENST00000440702 KRTAP9-6A0A140TA67 174 aa9.75□□□□□ -0.85
FAM20B-202ENST00000440702 HBDP02042 147 aa9.75□□□□□ -0.85
FAM20B-202ENST00000440702 CTAG1AP78358 180 aa9.75□□□□□ -0.85
FAM20B-202ENST00000440702 BAGE3Q86Y29 109 aa9.75□□□□□ -0.85
FAM20B-202ENST00000440702 URB1-AS1Q96HZ7 61 aa9.75□□□□□ -0.85
FAM20B-202ENST00000440702 KRTAP3-3Q9BYR6 98 aa9.75□□□□□ -0.85
FAM20B-202ENST00000440702 KRTAP3-2Q9BYR7 98 aa9.75□□□□□ -0.85
FAM20B-202ENST00000440702 C4orf48Q5BLP8 95 aa9.74□□□□□ -0.85
FAM20B-202ENST00000440702 SPAG11AQ6PDA7 123 aa9.74□□□□□ -0.85
FAM20B-202ENST00000440702 DAND5Q8N907 189 aa9.74□□□□□ -0.85
FAM20B-202ENST00000440702 Q8NBF4 154 aa9.73□□□□□ -0.85
FAM20B-202ENST00000440702 SEC11CQ9BY50 192 aa9.73□□□□□ -0.85
FAM20B-202ENST00000440702 NCR3O14931 201 aa9.72□□□□□ -0.85
FAM20B-202ENST00000440702 LINC00614P0C842 121 aa9.72□□□□□ -0.85
FAM20B-202ENST00000440702 LINC00337Q8N6G1 96 aa9.72□□□□□ -0.85
FAM20B-202ENST00000440702 C18orf32Q8TCD1 76 aa9.72□□□□□ -0.85
FAM20B-202ENST00000440702 ZNF706Q9Y5V0 76 aaPredicted RBP9.72□□□□□ -0.85
FAM20B-202ENST00000440702 SFTA2Q6UW10 78 aa9.71□□□□□ -0.86
FAM20B-202ENST00000440702 FP248Q71RG6 208 aaPredicted RBP9.71□□□□□ -0.86
FAM20B-202ENST00000440702 RPS10P5Q9NQ39 176 aa9.71□□□□□ -0.86
FAM20B-202ENST00000440702 TRAPPC1Q9Y5R8 145 aa9.7□□□□□ -0.86
FAM20B-202ENST00000440702 PRYO14603 147 aa9.69□□□□□ -0.86
FAM20B-202ENST00000440702 ATP6V1G1O75348 118 aa9.69□□□□□ -0.86
FAM20B-202ENST00000440702 SMIM13P0DJ93 91 aa9.69□□□□□ -0.86
FAM20B-202ENST00000440702 CHTOPQ9Y3Y2 248 aaKnown RBP9.69□□□□□ -0.86
FAM20B-202ENST00000440702 KRTAP13-3Q3SY46 172 aa9.68□□□□□ -0.86
FAM20B-202ENST00000440702 BOD1L2Q8IYS8 172 aa9.68□□□□□ -0.86
FAM20B-202ENST00000440702 SMCR5Q8TEV8 140 aa9.68□□□□□ -0.86
FAM20B-202ENST00000440702 MEIG1Q5JSS6 88 aa9.67□□□□□ -0.86
FAM20B-202ENST00000440702 COMMD7Q86VX2 200 aa9.67□□□□□ -0.86
FAM20B-202ENST00000440702 ETDCA0A1B0GVM5 59 aa9.66□□□□□ -0.86
FAM20B-202ENST00000440702 TMEM223A0PJW6 202 aa9.66□□□□□ -0.86
FAM20B-202ENST00000440702 IFITM2Q01629 132 aa9.66□□□□□ -0.86
FAM20B-202ENST00000440702 RHEBQ15382 184 aa9.66□□□□□ -0.86
FAM20B-202ENST00000440702 MIR7-3HGQ8N6C7 128 aa9.64□□□□□ -0.87
FAM20B-202ENST00000440702 TRBV10-3A0A0K0K1G6 114 aa9.63□□□□□ -0.87
FAM20B-202ENST00000440702 ASB16-AS1Q495Z4 193 aa9.63□□□□□ -0.87
FAM20B-202ENST00000440702 GAGE2AQ6NT46 116 aa9.63□□□□□ -0.87
FAM20B-202ENST00000440702 KRTAP4-1Q9BYQ7 146 aa9.63□□□□□ -0.87
FAM20B-202ENST00000440702 KCNQ1DNQ9H478 68 aa9.63□□□□□ -0.87
FAM20B-202ENST00000440702 IGLV9-49A0A0B4J1Y8 123 aa9.62□□□□□ -0.87
FAM20B-202ENST00000440702 SPINK1P00995 79 aa9.62□□□□□ -0.87
FAM20B-202ENST00000440702 SPRR1AP35321 89 aa9.62□□□□□ -0.87
FAM20B-202ENST00000440702 MOBPQ13875 183 aa9.62□□□□□ -0.87
FAM20B-202ENST00000440702 KRTAP4-16G5E9R7 235 aaPredicted RBP9.61□□□□□ -0.87
FAM20B-202ENST00000440702 C10orf91Q5T1B1 145 aa9.61□□□□□ -0.87
FAM20B-202ENST00000440702 LINC01547P58512 204 aaPredicted RBP9.6□□□□□ -0.87
FAM20B-202ENST00000440702 IFI27L1Q96BM0 104 aa9.6□□□□□ -0.87
FAM20B-202ENST00000440702 TRAV12-1A0A0B4J245 112 aa9.59□□□□□ -0.87
FAM20B-202ENST00000440702 ERC2-IT1O76042 136 aa9.59□□□□□ -0.87
FAM20B-202ENST00000440702 LINC00483Q53H64 154 aa9.59□□□□□ -0.87
FAM20B-202ENST00000440702 NDUFA12Q9UI09 145 aa9.59□□□□□ -0.87
FAM20B-202ENST00000440702 SEC61BP60468 96 aaKnown RBP9.58□□□□□ -0.88
FAM20B-202ENST00000440702 HERV-K104P63124 156 aa9.58□□□□□ -0.88
FAM20B-202ENST00000440702 B5MCH6 92 aa9.57□□□□□ -0.88
FAM20B-202ENST00000440702 H0Y8G0 127 aa9.56□□□□□ -0.88
FAM20B-202ENST00000440702 S100A12P80511 92 aa9.56□□□□□ -0.88
FAM20B-202ENST00000440702 Q8N377 158 aa9.56□□□□□ -0.88
FAM20B-202ENST00000440702 MYMXA0A1B0GTQ4 84 aa9.55□□□□□ -0.88
FAM20B-202ENST00000440702 DDTP30046 118 aa9.54□□□□□ -0.88
FAM20B-202ENST00000440702 TSPEAR-AS2P59090 65 aa9.54□□□□□ -0.88
FAM20B-202ENST00000440702 FAM19A2Q8N3H0 131 aa9.54□□□□□ -0.88
FAM20B-202ENST00000440702 CHCHD1Q96BP2 118 aaKnown RBP9.54□□□□□ -0.88
FAM20B-202ENST00000440702 MAP1LC3CQ9BXW4 147 aa9.54□□□□□ -0.88
FAM20B-202ENST00000440702 LINC00587B1AMM8 73 aa9.53□□□□□ -0.88
FAM20B-202ENST00000440702 Q9BRP9 147 aa9.53□□□□□ -0.88
FAM20B-202ENST00000440702 APOC3P02656 99 aa9.52□□□□□ -0.89
FAM20B-202ENST00000440702 SLC25A20O43772 301 aa9.51□□□□□ -0.89
FAM20B-202ENST00000440702 C9orf153Q5TBE3 101 aa9.51□□□□□ -0.89
FAM20B-202ENST00000440702 SSBP3-AS1Q7Z2R9 100 aa9.51□□□□□ -0.89
FAM20B-202ENST00000440702 RPS29P62273 56 aaKnown RBP9.5□□□□□ -0.89
FAM20B-202ENST00000440702 Q6ZRX8 168 aa9.5□□□□□ -0.89
FAM20B-202ENST00000440702 LEPROTO15243 131 aa9.48□□□□□ -0.89
FAM20B-202ENST00000440702 HSBP1O75506 76 aa9.48□□□□□ -0.89
FAM20B-202ENST00000440702 XP32Q5T750 250 aa9.48□□□□□ -0.89
FAM20B-202ENST00000440702 TRBV10-2A0A0K0K1G8 114 aa9.47□□□□□ -0.89
FAM20B-202ENST00000440702 SNAPINO95295 136 aa9.47□□□□□ -0.89
FAM20B-202ENST00000440702 S100A7L2Q5SY68 101 aa9.47□□□□□ -0.89
FAM20B-202ENST00000440702 MIEN1Q9BRT3 115 aa9.47□□□□□ -0.89
FAM20B-202ENST00000440702 SPANXB1Q9NS25 103 aaPredicted RBP9.47□□□□□ -0.89
FAM20B-202ENST00000440702 LOC107984156A0A0G2JMH3 177 aa9.45□□□□□ -0.9
FAM20B-202ENST00000440702 NPC2P61916 151 aa9.45□□□□□ -0.9
FAM20B-202ENST00000440702 ARL17AQ8IVW1 177 aa9.45□□□□□ -0.9
FAM20B-202ENST00000440702 SVBPQ8N300 66 aa9.45□□□□□ -0.9
FAM20B-202ENST00000440702 ST20-AS1Q8NBB2 130 aa9.45□□□□□ -0.9
FAM20B-202ENST00000440702 TRAV23DV6A0A075B6W5 121 aa9.44□□□□□ -0.9
FAM20B-202ENST00000440702 J3QQQ9 107 aa9.44□□□□□ -0.9
FAM20B-202ENST00000440702 NDUFA5Q16718 116 aa9.44□□□□□ -0.9
FAM20B-202ENST00000440702 YPEL4Q96NS1 127 aa9.44□□□□□ -0.9
FAM20B-202ENST00000440702 IGLV6-57P01721 117 aa9.43□□□□□ -0.9
FAM20B-202ENST00000440702 PMCHL2Q9BQD1 86 aa9.43□□□□□ -0.9
FAM20B-202ENST00000440702 LGALS3P17931 250 aaKnown RBP9.42□□□□□ -0.9
FAM20B-202ENST00000440702 JOSD1Q15040 202 aaPredicted RBP9.42□□□□□ -0.9
FAM20B-202ENST00000440702 LEPROTL1O95214 131 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms