RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 TMEM170BQ5T4T1 132 aa12.01□□□□□ -0.49
CPNE1-219ENST00000440240 CBLN2Q8IUK8 224 aa12.01□□□□□ -0.49
CPNE1-219ENST00000440240 C11orf86A6NJI1 115 aa12□□□□□ -0.49
CPNE1-219ENST00000440240 CDIP1Q9H305 208 aa12□□□□□ -0.49
CPNE1-219ENST00000440240 PMCHL1Q16048 86 aa11.99□□□□□ -0.49
CPNE1-219ENST00000440240 TPRXLQ17RH7 258 aa11.99□□□□□ -0.49
CPNE1-219ENST00000440240 COMMD7Q86VX2 200 aa11.99□□□□□ -0.49
CPNE1-219ENST00000440240 IGLV7-46A0A075B6I9 117 aa11.98□□□□□ -0.49
CPNE1-219ENST00000440240 Q8NDZ9 215 aa11.98□□□□□ -0.49
CPNE1-219ENST00000440240 LINC00158P58513 81 aa11.97□□□□□ -0.49
CPNE1-219ENST00000440240 HIGD2AQ9BW72 106 aa11.97□□□□□ -0.49
CPNE1-219ENST00000440240 SPAG11AQ6PDA7 123 aa11.96□□□□□ -0.49
CPNE1-219ENST00000440240 FAT4Q6V0I7 4981 aa11.96□□□□□ -0.5
CPNE1-219ENST00000440240 CHTOPQ9Y3Y2 248 aaKnown RBP11.95□□□□□ -0.5
CPNE1-219ENST00000440240 C3orf22Q8N5N4 141 aa11.93□□□□□ -0.5
CPNE1-219ENST00000440240 ATP6V1G1O75348 118 aa11.92□□□□□ -0.5
CPNE1-219ENST00000440240 A0A0U1RRA0 63 aa11.91□□□□□ -0.5
CPNE1-219ENST00000440240 SPRR4Q96PI1 79 aa11.91□□□□□ -0.5
CPNE1-219ENST00000440240 ZNF706Q9Y5V0 76 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-219ENST00000440240 TMEM223A0PJW6 202 aa11.9□□□□□ -0.5
CPNE1-219ENST00000440240 C4orf48Q5BLP8 95 aa11.9□□□□□ -0.5
CPNE1-219ENST00000440240 PPDPFQ9H3Y8 114 aa11.9□□□□□ -0.5
CPNE1-219ENST00000440240 TRAV12-1A0A0B4J245 112 aa11.89□□□□□ -0.51
CPNE1-219ENST00000440240 LCE2AQ5TA79 106 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-219ENST00000440240 BOD1L2Q8IYS8 172 aa11.87□□□□□ -0.51
CPNE1-219ENST00000440240 MUC17Q685J3 4493 aa11.87□□□□□ -0.51
CPNE1-219ENST00000440240 LINC00587B1AMM8 73 aa11.86□□□□□ -0.51
CPNE1-219ENST00000440240 PRYO14603 147 aa11.86□□□□□ -0.51
CPNE1-219ENST00000440240 SMIM13P0DJ93 91 aa11.86□□□□□ -0.51
CPNE1-219ENST00000440240 LINC00337Q8N6G1 96 aa11.86□□□□□ -0.51
CPNE1-219ENST00000440240 IFI27L1Q96BM0 104 aa11.86□□□□□ -0.51
CPNE1-219ENST00000440240 CHCHD1Q96BP2 118 aaKnown RBP11.86□□□□□ -0.51
CPNE1-219ENST00000440240 APOC3P02656 99 aa11.85□□□□□ -0.51
CPNE1-219ENST00000440240 HERV-K104P63124 156 aa11.85□□□□□ -0.51
CPNE1-219ENST00000440240 MEIG1Q5JSS6 88 aa11.85□□□□□ -0.51
CPNE1-219ENST00000440240 FP248Q71RG6 208 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-219ENST00000440240 KRTAP9-2Q9BYQ4 174 aa11.85□□□□□ -0.51
CPNE1-219ENST00000440240 KCNQ1DNQ9H478 68 aa11.85□□□□□ -0.51
CPNE1-219ENST00000440240 SNAPINO95295 136 aa11.83□□□□□ -0.52
CPNE1-219ENST00000440240 SPRR1AP35321 89 aa11.83□□□□□ -0.52
CPNE1-219ENST00000440240 MIR7-3HGQ8N6C7 128 aa11.83□□□□□ -0.52
CPNE1-219ENST00000440240 ETDCA0A1B0GVM5 59 aa11.82□□□□□ -0.52
CPNE1-219ENST00000440240 NDUFA5Q16718 116 aa11.82□□□□□ -0.52
CPNE1-219ENST00000440240 SMCR5Q8TEV8 140 aa11.82□□□□□ -0.52
CPNE1-219ENST00000440240 NCR3O14931 201 aa11.81□□□□□ -0.52
CPNE1-219ENST00000440240 S100A12P80511 92 aa11.81□□□□□ -0.52
CPNE1-219ENST00000440240 SVBPQ8N300 66 aa11.81□□□□□ -0.52
CPNE1-219ENST00000440240 MAP1LC3CQ9BXW4 147 aa11.81□□□□□ -0.52
CPNE1-219ENST00000440240 Q8NBF4 154 aa11.8□□□□□ -0.52
CPNE1-219ENST00000440240 NDUFA12Q9UI09 145 aa11.8□□□□□ -0.52
CPNE1-219ENST00000440240 MYMXA0A1B0GTQ4 84 aa11.79□□□□□ -0.52
CPNE1-219ENST00000440240 KRTAP4-16G5E9R7 235 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-219ENST00000440240 SPINK1P00995 79 aa11.79□□□□□ -0.52
CPNE1-219ENST00000440240 DAND5Q8N907 189 aa11.79□□□□□ -0.52
CPNE1-219ENST00000440240 TRBV10-3A0A0K0K1G6 114 aa11.77□□□□□ -0.53
CPNE1-219ENST00000440240 HSBP1O75506 76 aa11.76□□□□□ -0.53
CPNE1-219ENST00000440240 LINC00483Q53H64 154 aa11.75□□□□□ -0.53
CPNE1-219ENST00000440240 KRTAP13-3Q3SY46 172 aa11.74□□□□□ -0.53
CPNE1-219ENST00000440240 YPEL4Q96NS1 127 aa11.74□□□□□ -0.53
CPNE1-219ENST00000440240 LOC107984156A0A0G2JMH3 177 aa11.73□□□□□ -0.53
CPNE1-219ENST00000440240 GAGE2AQ6NT46 116 aa11.73□□□□□ -0.53
CPNE1-219ENST00000440240 ARL17AQ8IVW1 177 aa11.73□□□□□ -0.53
CPNE1-219ENST00000440240 FAM19A2Q8N3H0 131 aa11.73□□□□□ -0.53
CPNE1-219ENST00000440240 B5MCH6 92 aa11.72□□□□□ -0.53
CPNE1-219ENST00000440240 TRBV10-2A0A0K0K1G8 114 aa11.71□□□□□ -0.53
CPNE1-219ENST00000440240 SSBP3-AS1Q7Z2R9 100 aa11.71□□□□□ -0.53
CPNE1-219ENST00000440240 H0Y8G0 127 aa11.7□□□□□ -0.54
CPNE1-219ENST00000440240 LEPROTO15243 131 aa11.7□□□□□ -0.54
CPNE1-219ENST00000440240 DDTP30046 118 aa11.7□□□□□ -0.54
CPNE1-219ENST00000440240 RPS29P62273 56 aaKnown RBP11.69□□□□□ -0.54
CPNE1-219ENST00000440240 ASB16-AS1Q495Z4 193 aa11.69□□□□□ -0.54
CPNE1-219ENST00000440240 LEPROTL1O95214 131 aa11.68□□□□□ -0.54
CPNE1-219ENST00000440240 IGLV9-49A0A0B4J1Y8 123 aa11.67□□□□□ -0.54
CPNE1-219ENST00000440240 ERC2-IT1O76042 136 aa11.67□□□□□ -0.54
CPNE1-219ENST00000440240 PLNP26678 52 aa11.67□□□□□ -0.54
CPNE1-219ENST00000440240 MOBPQ13875 183 aa11.67□□□□□ -0.54
CPNE1-219ENST00000440240 MIEN1Q9BRT3 115 aa11.67□□□□□ -0.54
CPNE1-219ENST00000440240 TSPEAR-AS2P59090 65 aa11.66□□□□□ -0.54
CPNE1-219ENST00000440240 Q6ZRX8 168 aa11.66□□□□□ -0.54
CPNE1-219ENST00000440240 SPANXB1Q9NS25 103 aaPredicted RBP11.66□□□□□ -0.54
CPNE1-219ENST00000440240 J3QQQ9 107 aa11.65□□□□□ -0.54
CPNE1-219ENST00000440240 NMUP48645 174 aa11.64□□□□□ -0.55
CPNE1-219ENST00000440240 SEC61BP60468 96 aaKnown RBP11.64□□□□□ -0.55
CPNE1-219ENST00000440240 HERVK_113P61574 105 aa11.64□□□□□ -0.55
CPNE1-219ENST00000440240 S100A7L2Q5SY68 101 aa11.64□□□□□ -0.55
CPNE1-219ENST00000440240 Q9BRP9 147 aa11.64□□□□□ -0.55
CPNE1-219ENST00000440240 SLC25A20O43772 301 aa11.63□□□□□ -0.55
CPNE1-219ENST00000440240 NDUFC2O95298 119 aa11.63□□□□□ -0.55
CPNE1-219ENST00000440240 JOSD1Q15040 202 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-219ENST00000440240 Q8N377 158 aa11.63□□□□□ -0.55
CPNE1-219ENST00000440240 DPM2O94777 84 aa11.62□□□□□ -0.55
CPNE1-219ENST00000440240 HSPB8Q9UJY1 196 aa11.62□□□□□ -0.55
CPNE1-219ENST00000440240 IGLV6-57P01721 117 aa11.61□□□□□ -0.55
CPNE1-219ENST00000440240 TRGC2P03986 189 aa11.61□□□□□ -0.55
CPNE1-219ENST00000440240 LGALS3P17931 250 aaKnown RBP11.61□□□□□ -0.55
CPNE1-219ENST00000440240 SERF1AO75920 110 aa11.6□□□□□ -0.55
CPNE1-219ENST00000440240 TRAV23DV6A0A075B6W5 121 aa11.58□□□□□ -0.56
CPNE1-219ENST00000440240 IGKCP01834 107 aa11.58□□□□□ -0.56
CPNE1-219ENST00000440240 LINC01547P58512 204 aaPredicted RBP11.58□□□□□ -0.56
CPNE1-219ENST00000440240 FABP4P15090 132 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms