RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 TMEM238C9JI98 176 aa9.55□□□□□ -0.88
SNRPD3-204ENST00000439775 PRLHP81277 87 aa9.55□□□□□ -0.88
SNRPD3-204ENST00000439775 KRTAP13-2Q52LG2 175 aa9.55□□□□□ -0.88
SNRPD3-204ENST00000439775 IFI27L1Q96BM0 104 aa9.55□□□□□ -0.88
SNRPD3-204ENST00000439775 ANAPC11Q9NYG5 84 aa9.55□□□□□ -0.88
SNRPD3-204ENST00000439775 M0R378 163 aa9.54□□□□□ -0.88
SNRPD3-204ENST00000439775 TSPAN13O95857 204 aa9.54□□□□□ -0.88
SNRPD3-204ENST00000439775 FAM19A1Q7Z5A9 133 aa9.54□□□□□ -0.88
SNRPD3-204ENST00000439775 LINC00158P58513 81 aa9.52□□□□□ -0.89
SNRPD3-204ENST00000439775 HSBP1O75506 76 aa9.49□□□□□ -0.89
SNRPD3-204ENST00000439775 IGKV2D-26A0A0A0MRZ7 120 aa9.48□□□□□ -0.89
SNRPD3-204ENST00000439775 HERV-K104P63124 156 aa9.48□□□□□ -0.89
SNRPD3-204ENST00000439775 CTAG1AP78358 180 aa9.48□□□□□ -0.89
SNRPD3-204ENST00000439775 CBLN2Q8IUK8 224 aa9.48□□□□□ -0.89
SNRPD3-204ENST00000439775 LINC00304Q8N9R0 145 aa9.48□□□□□ -0.89
SNRPD3-204ENST00000439775 PLEKHB2Q96CS7 222 aa9.48□□□□□ -0.89
SNRPD3-204ENST00000439775 A0A0U1RRA0 63 aa9.47□□□□□ -0.89
SNRPD3-204ENST00000439775 SMIM13P0DJ93 91 aa9.47□□□□□ -0.89
SNRPD3-204ENST00000439775 FAM19A2Q8N3H0 131 aa9.47□□□□□ -0.89
SNRPD3-204ENST00000439775 LINC00587B1AMM8 73 aa9.46□□□□□ -0.9
SNRPD3-204ENST00000439775 MEIG1Q5JSS6 88 aa9.46□□□□□ -0.9
SNRPD3-204ENST00000439775 ATP6V1G1O75348 118 aa9.45□□□□□ -0.9
SNRPD3-204ENST00000439775 BOD1L2Q8IYS8 172 aa9.45□□□□□ -0.9
SNRPD3-204ENST00000439775 MIR7-3HGQ8N6C7 128 aa9.45□□□□□ -0.9
SNRPD3-204ENST00000439775 HIGD2AQ9BW72 106 aa9.45□□□□□ -0.9
SNRPD3-204ENST00000439775 NDUFA12Q9UI09 145 aa9.45□□□□□ -0.9
SNRPD3-204ENST00000439775 PRYO14603 147 aa9.44□□□□□ -0.9
SNRPD3-204ENST00000439775 TRGC2P03986 189 aa9.44□□□□□ -0.9
SNRPD3-204ENST00000439775 MYMXA0A1B0GTQ4 84 aa9.43□□□□□ -0.9
SNRPD3-204ENST00000439775 LINC00310P59036 64 aa9.43□□□□□ -0.9
SNRPD3-204ENST00000439775 MUC2Q02817 5179 aa9.43□□□□□ -0.9
SNRPD3-204ENST00000439775 LEPROTL1O95214 131 aa9.42□□□□□ -0.9
SNRPD3-204ENST00000439775 PLNP26678 52 aa9.42□□□□□ -0.9
SNRPD3-204ENST00000439775 SPRR1AP35321 89 aa9.42□□□□□ -0.9
SNRPD3-204ENST00000439775 LINC00337Q8N6G1 96 aa9.42□□□□□ -0.9
SNRPD3-204ENST00000439775 SPRR4Q96PI1 79 aa9.42□□□□□ -0.9
SNRPD3-204ENST00000439775 MAP1LC3CQ9BXW4 147 aa9.42□□□□□ -0.9
SNRPD3-204ENST00000439775 KCNQ1DNQ9H478 68 aa9.42□□□□□ -0.9
SNRPD3-204ENST00000439775 H0Y8G0 127 aa9.41□□□□□ -0.9
SNRPD3-204ENST00000439775 NCR3O14931 201 aa9.41□□□□□ -0.9
SNRPD3-204ENST00000439775 SERF1AO75920 110 aa9.41□□□□□ -0.9
SNRPD3-204ENST00000439775 RETNLBQ9BQ08 111 aa9.41□□□□□ -0.9
SNRPD3-204ENST00000439775 ZNF706Q9Y5V0 76 aaPredicted RBP9.41□□□□□ -0.9
SNRPD3-204ENST00000439775 TSPEAR-AS2P59090 65 aa9.4□□□□□ -0.9
SNRPD3-204ENST00000439775 C3orf22Q8N5N4 141 aa9.4□□□□□ -0.9
SNRPD3-204ENST00000439775 KRTAP4-16G5E9R7 235 aaPredicted RBP9.39□□□□□ -0.91
SNRPD3-204ENST00000439775 LEPROTO15243 131 aa9.39□□□□□ -0.91
SNRPD3-204ENST00000439775 HSPB8Q9UJY1 196 aa9.39□□□□□ -0.91
SNRPD3-204ENST00000439775 LOC107984156A0A0G2JMH3 177 aa9.38□□□□□ -0.91
SNRPD3-204ENST00000439775 TPRXLQ17RH7 258 aa9.38□□□□□ -0.91
SNRPD3-204ENST00000439775 ARL17AQ8IVW1 177 aa9.38□□□□□ -0.91
SNRPD3-204ENST00000439775 TRBV10-3A0A0K0K1G6 114 aa9.37□□□□□ -0.91
SNRPD3-204ENST00000439775 SPAG11AQ6PDA7 123 aa9.37□□□□□ -0.91
SNRPD3-204ENST00000439775 ETDCA0A1B0GVM5 59 aa9.36□□□□□ -0.91
SNRPD3-204ENST00000439775 J3QQQ9 107 aa9.36□□□□□ -0.91
SNRPD3-204ENST00000439775 DPM2O94777 84 aa9.36□□□□□ -0.91
SNRPD3-204ENST00000439775 NMUP48645 174 aa9.36□□□□□ -0.91
SNRPD3-204ENST00000439775 HERVK_113P61574 105 aa9.36□□□□□ -0.91
SNRPD3-204ENST00000439775 TRBV10-2A0A0K0K1G8 114 aa9.35□□□□□ -0.91
SNRPD3-204ENST00000439775 S100A12P80511 92 aa9.35□□□□□ -0.91
SNRPD3-204ENST00000439775 A0A0U1RQV1 116 aa9.34□□□□□ -0.91
SNRPD3-204ENST00000439775 DAND5Q8N907 189 aa9.34□□□□□ -0.91
SNRPD3-204ENST00000439775 SMCR5Q8TEV8 140 aa9.34□□□□□ -0.91
SNRPD3-204ENST00000439775 IGLV7-46A0A075B6I9 117 aa9.33□□□□□ -0.92
SNRPD3-204ENST00000439775 IGKCP01834 107 aa9.33□□□□□ -0.92
SNRPD3-204ENST00000439775 FABP4P15090 132 aa9.33□□□□□ -0.92
SNRPD3-204ENST00000439775 LINC00483Q53H64 154 aa9.33□□□□□ -0.92
SNRPD3-204ENST00000439775 COLCA2A8K830 154 aa9.32□□□□□ -0.92
SNRPD3-204ENST00000439775 LGALS3P17931 250 aaKnown RBP9.32□□□□□ -0.92
SNRPD3-204ENST00000439775 DDTP30046 118 aa9.32□□□□□ -0.92
SNRPD3-204ENST00000439775 PMCHL2Q9BQD1 86 aa9.32□□□□□ -0.92
SNRPD3-204ENST00000439775 MIEN1Q9BRT3 115 aa9.32□□□□□ -0.92
SNRPD3-204ENST00000439775 SPANXB1Q9NS25 103 aaPredicted RBP9.32□□□□□ -0.92
SNRPD3-204ENST00000439775 B5MCH6 92 aa9.31□□□□□ -0.92
SNRPD3-204ENST00000439775 CDIP1Q9H305 208 aa9.31□□□□□ -0.92
SNRPD3-204ENST00000439775 NDUFC2O95298 119 aa9.3□□□□□ -0.92
SNRPD3-204ENST00000439775 SLC7A5P1Q8MH63 180 aa9.3□□□□□ -0.92
SNRPD3-204ENST00000439775 Q8NBF4 154 aa9.3□□□□□ -0.92
SNRPD3-204ENST00000439775 C4orf48Q5BLP8 95 aa9.29□□□□□ -0.92
SNRPD3-204ENST00000439775 Q6ZRX8 168 aa9.29□□□□□ -0.92
SNRPD3-204ENST00000439775 FP248Q71RG6 208 aaPredicted RBP9.29□□□□□ -0.92
SNRPD3-204ENST00000439775 PPDPFQ9H3Y8 114 aa9.29□□□□□ -0.92
SNRPD3-204ENST00000439775 IGLV6-57P01721 117 aa9.28□□□□□ -0.92
SNRPD3-204ENST00000439775 E9PLD3 99 aa9.27□□□□□ -0.93
SNRPD3-204ENST00000439775 Q9BRP9 147 aa9.27□□□□□ -0.93
SNRPD3-204ENST00000439775 ERC2-IT1O76042 136 aa9.26□□□□□ -0.93
SNRPD3-204ENST00000439775 SPINK1P00995 79 aa9.26□□□□□ -0.93
SNRPD3-204ENST00000439775 GAGE2AQ6NT46 116 aa9.26□□□□□ -0.93
SNRPD3-204ENST00000439775 A0A0J9YXY3 114 aa9.25□□□□□ -0.93
SNRPD3-204ENST00000439775 S100A7L2Q5SY68 101 aa9.25□□□□□ -0.93
SNRPD3-204ENST00000439775 TRAV23DV6A0A075B6W5 121 aa9.24□□□□□ -0.93
SNRPD3-204ENST00000439775 SOSTDC1Q6X4U4 206 aa9.24□□□□□ -0.93
SNRPD3-204ENST00000439775 SYS1-DBNDD2H3BUS1 97 aa9.23□□□□□ -0.93
SNRPD3-204ENST00000439775 RPS29P62273 56 aaKnown RBP9.23□□□□□ -0.93
SNRPD3-204ENST00000439775 JOSD1Q15040 202 aaPredicted RBP9.23□□□□□ -0.93
SNRPD3-204ENST00000439775 ADAMTSL4-AS1Q5T5F5 129 aa9.23□□□□□ -0.93
SNRPD3-204ENST00000439775 EIF4EBP3O60516 100 aaPredicted RBP9.22□□□□□ -0.93
SNRPD3-204ENST00000439775 HIST1H2BKO60814 126 aa9.22□□□□□ -0.93
SNRPD3-204ENST00000439775 HIST1H2BJP06899 126 aa9.22□□□□□ -0.93
SNRPD3-204ENST00000439775 HIST1H2BOP23527 126 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms