RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 PLNP26678 52 aa8.01□□□□□ -1.13
LINC00399-201ENST00000439008 LBHQ53QV2 105 aaPredicted RBP8.01□□□□□ -1.13
LINC00399-201ENST00000439008 COA6Q5JTJ3 125 aaKnown RBP8.01□□□□□ -1.13
LINC00399-201ENST00000439008 NDUFA12Q9UI09 145 aa8.01□□□□□ -1.13
LINC00399-201ENST00000439008 H0Y9J4 135 aa8□□□□□ -1.13
LINC00399-201ENST00000439008 SYS1-DBNDD2H3BUS1 97 aa8□□□□□ -1.13
LINC00399-201ENST00000439008 LEPROTO15243 131 aa8□□□□□ -1.13
LINC00399-201ENST00000439008 KRTAP1-4P0C5Y4 121 aa8□□□□□ -1.13
LINC00399-201ENST00000439008 LINC00158P58513 81 aa8□□□□□ -1.13
LINC00399-201ENST00000439008 REG3GQ6UW15 175 aa8□□□□□ -1.13
LINC00399-201ENST00000439008 MAP1LC3CQ9BXW4 147 aa8□□□□□ -1.13
LINC00399-201ENST00000439008 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
LINC00399-201ENST00000439008 ATP6V1G1O75348 118 aa7.99□□□□□ -1.13
LINC00399-201ENST00000439008 IGKCP01834 107 aa7.99□□□□□ -1.13
LINC00399-201ENST00000439008 SFTA2Q6UW10 78 aa7.99□□□□□ -1.13
LINC00399-201ENST00000439008 DIRC1Q969H9 104 aa7.99□□□□□ -1.13
LINC00399-201ENST00000439008 NKAPP1Q8N9T2 125 aa7.98□□□□□ -1.13
LINC00399-201ENST00000439008 IGKV2-28A0A075B6P5 120 aa7.97□□□□□ -1.13
LINC00399-201ENST00000439008 J3QQQ9 107 aa7.97□□□□□ -1.13
LINC00399-201ENST00000439008 ZNF861PO60384 105 aa7.97□□□□□ -1.13
LINC00399-201ENST00000439008 IGKV2D-28P01615 120 aa7.97□□□□□ -1.13
LINC00399-201ENST00000439008 C3orf79P0CE67 100 aa7.97□□□□□ -1.13
LINC00399-201ENST00000439008 LINC01545Q5VT33 79 aa7.97□□□□□ -1.13
LINC00399-201ENST00000439008 KRTAP13-1Q8IUC0 172 aa7.97□□□□□ -1.13
LINC00399-201ENST00000439008 MIR7-3HGQ8N6C7 128 aa7.97□□□□□ -1.13
LINC00399-201ENST00000439008 IGLV1-50A0A075B6I6 118 aa7.96□□□□□ -1.14
LINC00399-201ENST00000439008 TMEM238C9JI98 176 aa7.96□□□□□ -1.14
LINC00399-201ENST00000439008 BCE1O60756 84 aa7.96□□□□□ -1.14
LINC00399-201ENST00000439008 PRR26Q8N8Z3 221 aa7.96□□□□□ -1.14
LINC00399-201ENST00000439008 DAND5Q8N907 189 aa7.96□□□□□ -1.14
LINC00399-201ENST00000439008 PLEKHB2Q96CS7 222 aa7.96□□□□□ -1.14
LINC00399-201ENST00000439008 MYMXA0A1B0GTQ4 84 aa7.95□□□□□ -1.14
LINC00399-201ENST00000439008 HERV-K104P63124 156 aa7.95□□□□□ -1.14
LINC00399-201ENST00000439008 MEIG1Q5JSS6 88 aa7.95□□□□□ -1.14
LINC00399-201ENST00000439008 EIF4EBP3O60516 100 aaPredicted RBP7.94□□□□□ -1.14
LINC00399-201ENST00000439008 S100A1P23297 94 aa7.94□□□□□ -1.14
LINC00399-201ENST00000439008 E9PLD3 99 aa7.93□□□□□ -1.14
LINC00399-201ENST00000439008 M0R378 163 aa7.93□□□□□ -1.14
LINC00399-201ENST00000439008 RPL24P83731 157 aaKnown RBP7.93□□□□□ -1.14
LINC00399-201ENST00000439008 PET117Q6UWS5 81 aa7.93□□□□□ -1.14
LINC00399-201ENST00000439008 IGKV2D-26A0A0A0MRZ7 120 aa7.92□□□□□ -1.14
LINC00399-201ENST00000439008 HERVK_113P61574 105 aa7.92□□□□□ -1.14
LINC00399-201ENST00000439008 BOD1L2Q8IYS8 172 aa7.92□□□□□ -1.14
LINC00399-201ENST00000439008 TMEM126AQ9H061 195 aa7.92□□□□□ -1.14
LINC00399-201ENST00000439008 NCR3O14931 201 aa7.91□□□□□ -1.14
LINC00399-201ENST00000439008 LGALS3P17931 250 aaKnown RBP7.91□□□□□ -1.14
LINC00399-201ENST00000439008 KRTDAPP60985 99 aa7.91□□□□□ -1.14
LINC00399-201ENST00000439008 ADAMTSL4-AS1Q5T5F5 129 aa7.91□□□□□ -1.14
LINC00399-201ENST00000439008 SOSTDC1Q6X4U4 206 aa7.91□□□□□ -1.14
LINC00399-201ENST00000439008 TTTY13Q9BZ97 58 aa7.91□□□□□ -1.14
LINC00399-201ENST00000439008 LOC107984156A0A0G2JMH3 177 aa7.9□□□□□ -1.14
LINC00399-201ENST00000439008 A0A0J9YXY3 114 aa7.9□□□□□ -1.14
LINC00399-201ENST00000439008 RPL28P46779 137 aaKnown RBP7.9□□□□□ -1.14
LINC00399-201ENST00000439008 NMUP48645 174 aa7.9□□□□□ -1.14
LINC00399-201ENST00000439008 PRLHP81277 87 aa7.9□□□□□ -1.14
LINC00399-201ENST00000439008 ARL17AQ8IVW1 177 aa7.9□□□□□ -1.14
LINC00399-201ENST00000439008 LITAFQ99732 161 aa7.89□□□□□ -1.15
LINC00399-201ENST00000439008 ANAPC11Q9NYG5 84 aa7.89□□□□□ -1.15
LINC00399-201ENST00000439008 A0A087X002 238 aa7.88□□□□□ -1.15
LINC00399-201ENST00000439008 LINC00587B1AMM8 73 aa7.87□□□□□ -1.15
LINC00399-201ENST00000439008 UBE2AP49459 152 aa7.87□□□□□ -1.15
LINC00399-201ENST00000439008 FAM19A1Q7Z5A9 133 aa7.87□□□□□ -1.15
LINC00399-201ENST00000439008 ATOH7Q8N100 152 aa7.87□□□□□ -1.15
LINC00399-201ENST00000439008 HIST3H2BBQ8N257 126 aa7.87□□□□□ -1.15
LINC00399-201ENST00000439008 TRBV10-3A0A0K0K1G6 114 aa7.86□□□□□ -1.15
LINC00399-201ENST00000439008 KRTAP4-16G5E9R7 235 aaPredicted RBP7.86□□□□□ -1.15
LINC00399-201ENST00000439008 NPC2P61916 151 aa7.86□□□□□ -1.15
LINC00399-201ENST00000439008 ANKRD39Q53RE8 183 aa7.86□□□□□ -1.15
LINC00399-201ENST00000439008 LRP2P98164 4655 aa7.85□□□□□ -1.15
LINC00399-201ENST00000439008 HIST1H2BLQ99880 126 aa7.85□□□□□ -1.15
LINC00399-201ENST00000439008 KCNQ1DNQ9H478 68 aa7.85□□□□□ -1.15
LINC00399-201ENST00000439008 SPRR1AP35321 89 aa7.84□□□□□ -1.15
LINC00399-201ENST00000439008 KRTAP13-2Q52LG2 175 aa7.84□□□□□ -1.15
LINC00399-201ENST00000439008 ZNF815PA8K554 130 aa7.83□□□□□ -1.16
LINC00399-201ENST00000439008 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
LINC00399-201ENST00000439008 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
LINC00399-201ENST00000439008 PRYO14603 147 aa7.82□□□□□ -1.16
LINC00399-201ENST00000439008 LINC00308Q8TCZ7 52 aa7.81□□□□□ -1.16
LINC00399-201ENST00000439008 TRBV10-2A0A0K0K1G8 114 aa7.8□□□□□ -1.16
LINC00399-201ENST00000439008 TIMM17BO60830 172 aa7.8□□□□□ -1.16
LINC00399-201ENST00000439008 NDUFC2O95298 119 aa7.8□□□□□ -1.16
LINC00399-201ENST00000439008 DDTP30046 118 aa7.8□□□□□ -1.16
LINC00399-201ENST00000439008 PCP2Q8IVA1 136 aa7.8□□□□□ -1.16
LINC00399-201ENST00000439008 HIGD2AQ9BW72 106 aa7.8□□□□□ -1.16
LINC00399-201ENST00000439008 SPANXB1Q9NS25 103 aaPredicted RBP7.8□□□□□ -1.16
LINC00399-201ENST00000439008 IGLV6-57P01721 117 aa7.79□□□□□ -1.16
LINC00399-201ENST00000439008 RPL13AP40429 203 aaKnown RBP7.79□□□□□ -1.16
LINC00399-201ENST00000439008 SNRPEP62304 92 aaKnown RBP7.79□□□□□ -1.16
LINC00399-201ENST00000439008 LINC00337Q8N6G1 96 aa7.79□□□□□ -1.16
LINC00399-201ENST00000439008 C20orf202A1L168 122 aa7.78□□□□□ -1.16
LINC00399-201ENST00000439008 B5MCH6 92 aa7.78□□□□□ -1.16
LINC00399-201ENST00000439008 CRYGAP11844 174 aa7.78□□□□□ -1.16
LINC00399-201ENST00000439008 SMCR5Q8TEV8 140 aa7.78□□□□□ -1.16
LINC00399-201ENST00000439008 MIEN1Q9BRT3 115 aa7.78□□□□□ -1.16
LINC00399-201ENST00000439008 ERC2-IT1O76042 136 aa7.77□□□□□ -1.17
LINC00399-201ENST00000439008 UBR4Q5T4S7 5183 aa7.76□□□□□ -1.17
LINC00399-201ENST00000439008 C5orf52A6NGY3 159 aa7.76□□□□□ -1.17
LINC00399-201ENST00000439008 S100A2P29034 98 aa7.76□□□□□ -1.17
LINC00399-201ENST00000439008 FAM229BQ4G0N7 80 aa7.76□□□□□ -1.17
LINC00399-201ENST00000439008 SPRR4Q96PI1 79 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms