RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 LINC00305Q7Z4B0 112 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 BAGE2Q86Y30 109 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 BPIFA4PQ86YQ2 179 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 FAM223AQ8IWN6 122 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 DYNAPQ8N1N2 210 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 C3orf22Q8N5N4 141 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 OR4B1Q8NGF8 309 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 TSKUQ8WUA8 353 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 USMG5Q96IX5 58 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 C12orf57Q99622 126 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST1H2BLQ99880 126 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 CNFNQ9BYD5 112 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 C21orf62Q9NYP8 219 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 HSPB8Q9UJY1 196 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIGD1AQ9Y241 93 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 LENEPQ9Y5L5 61 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 SYNE1Q8NF91 8797 aaKnown RBP1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 IGHV3OR16-8A0A075B7F1 116 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 C20orf202A1L168 122 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 J3KT08 172 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 K7ERS5 55 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 PRM2P04554 102 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 GPX1P07203 203 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 PYYP10082 97 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 GZMBP10144 247 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 DEFA4P12838 97 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 SRIP30626 198 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 CRIP1P50238 77 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 ZNF80P51504 273 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 AKR1D1P51857 326 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 CCL18P55774 89 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 CMC4P56277 68 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 PKIAP61925 76 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 UBE2L3P68036 154 aaKnown RBP1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 HIST1H1AQ02539 215 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 PLGLAQ15195 96 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 IQCJQ1A5X6 159 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 RRN3P1Q2M238 152 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 MRPL51Q4U2R6 128 aaKnown RBP1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 PYY3Q5JQD4 70 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 PSMG4Q5JS54 123 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 LYRM7Q5U5X0 104 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 Q6AWC8 147 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 AMTNQ6UX39 209 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 TMEM136Q6ZRR5 245 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 LCA10Q71F78 164 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 PHF5AQ7RTV0 110 aaKnown RBP1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 PRR15Q8IV56 129 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 AMN1Q8IY45 258 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 OR8I2Q8N0Y5 310 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 MIR7-3HGQ8N6C7 128 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 C5orf56Q8N8D9 126 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 MYOZ3Q8TDC0 251 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 CARD19Q96LW7 228 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 SLC50A1Q9BRV3 221 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 DERL1Q9BUN8 251 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 NIT2Q9NQR4 276 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 NAT8BQ9UHF3 227 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 CYSLTR1Q9Y271 337 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 HILPDAQ9Y5L2 63 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 TRAPPC1Q9Y5R8 145 aa1.08□□□□□ -2.24
HMGB1P18-201ENST00000438801 TRAV2A0A0B4J234 112 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 TRAV41A0A0B4J266 112 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 A0A1B0GUT8 65 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 A0A1B0GV90 55 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 GRIFINA4D1Z8 144 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 LINC01546A6NGU7 62 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 A8MTW9 85 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 FABP5P3A8MUU1 101 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 A8MUU9 505 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 HIGD1CA8MV81 97 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 C9JAW5 83 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 F2Z2F3 143 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 M0R378 163 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 NDUFA4O00483 81 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 UBE2L6O14933 153 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 GNG7O60262 68 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 NUPR1O60356 82 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 SH2D1AO60880 128 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 IGLV7-43P04211 117 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 IGLC6P0CF74 106 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 SMIM17P0DL12 118 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 NTF3P20783 257 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 CBLN1P23435 193 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 CD24P25063 80 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 CSN1S1P47710 185 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 FXYD7P58549 80 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 TPPP2P59282 170 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 UBE2G1P62253 170 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 HIST1H4AP62805 103 aaKnown RBP1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 HBBP68871 147 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 RHOGP84095 191 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 GDF5OSQ5U4N7 250 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 UNQ5815/PRO19632Q6UWF5 114 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 KTN1-AS1Q86SY8 53 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 Q86TA4 180 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 C10orf126Q8N4M7 172 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 CMTM2Q8TAZ6 248 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 C18orf32Q8TCD1 76 aa1.07□□□□□ -2.24
HMGB1P18-201ENST00000438801 CHCHD1Q96BP2 118 aaKnown RBP1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms