RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 A0A0J9YWU9 116 aa9.47□□□□□ -0.89
PTCHD3-201ENST00000438700 REG3AQ06141 175 aa9.47□□□□□ -0.89
PTCHD3-201ENST00000438700 CHCHD10Q8WYQ3 142 aaPredicted RBP9.47□□□□□ -0.89
PTCHD3-201ENST00000438700 NCR3O14931 201 aa9.46□□□□□ -0.89
PTCHD3-201ENST00000438700 INAFM2P0DMQ5 153 aa9.46□□□□□ -0.89
PTCHD3-201ENST00000438700 Q8IZM0 81 aa9.46□□□□□ -0.89
PTCHD3-201ENST00000438700 LECT2O14960 151 aa9.45□□□□□ -0.9
PTCHD3-201ENST00000438700 DNAL4O96015 105 aa9.45□□□□□ -0.9
PTCHD3-201ENST00000438700 CXCL5P42830 114 aa9.45□□□□□ -0.9
PTCHD3-201ENST00000438700 Q6ZTC4 211 aa9.45□□□□□ -0.9
PTCHD3-201ENST00000438700 CD164L2Q6UWJ8 174 aa9.45□□□□□ -0.9
PTCHD3-201ENST00000438700 MRAPQ8TCY5 172 aa9.44□□□□□ -0.9
PTCHD3-201ENST00000438700 HIST1H4AP62805 103 aaKnown RBP9.44□□□□□ -0.9
PTCHD3-201ENST00000438700 KPRPQ5T749 579 aaPredicted RBP9.44□□□□□ -0.9
PTCHD3-201ENST00000438700 OR13C6PQ8NH95 151 aa9.44□□□□□ -0.9
PTCHD3-201ENST00000438700 KRTAP21-3Q3LHN1 58 aa9.43□□□□□ -0.9
PTCHD3-201ENST00000438700 A0A1B0GX51 115 aa9.42□□□□□ -0.9
PTCHD3-201ENST00000438700 NANOS2P60321 138 aaKnown RBP9.42□□□□□ -0.9
PTCHD3-201ENST00000438700 C9orf116Q5BN46 136 aaPredicted RBP9.42□□□□□ -0.9
PTCHD3-201ENST00000438700 KIAA0087Q14695 138 aa9.42□□□□□ -0.9
PTCHD3-201ENST00000438700 C11orf45Q8TAV5 145 aa9.41□□□□□ -0.9
PTCHD3-201ENST00000438700 TM2D3Q9BRN9 247 aa9.41□□□□□ -0.9
PTCHD3-201ENST00000438700 PRR3P79522 188 aaKnown RBP9.41□□□□□ -0.9
PTCHD3-201ENST00000438700 FAM19A5Q7Z5A7 132 aaPredicted RBP9.41□□□□□ -0.9
PTCHD3-201ENST00000438700 LINC01561Q8N1V8 128 aa9.41□□□□□ -0.9
PTCHD3-201ENST00000438700 CRYGAP11844 174 aa9.4□□□□□ -0.9
PTCHD3-201ENST00000438700 LELP1Q5T871 98 aa9.4□□□□□ -0.9
PTCHD3-201ENST00000438700 KLK12Q9UKR0 248 aa9.4□□□□□ -0.9
PTCHD3-201ENST00000438700 RPL18AQ02543 176 aaKnown RBP9.4□□□□□ -0.91
PTCHD3-201ENST00000438700 ATOX1O00244 68 aa9.39□□□□□ -0.91
PTCHD3-201ENST00000438700 H3BNG1 76 aa9.38□□□□□ -0.91
PTCHD3-201ENST00000438700 C6orf223Q8N319 242 aa9.38□□□□□ -0.91
PTCHD3-201ENST00000438700 OBSCN-AS1Q96MR7 158 aa9.38□□□□□ -0.91
PTCHD3-201ENST00000438700 DEFB131BA0A096LNP1 70 aa9.37□□□□□ -0.91
PTCHD3-201ENST00000438700 LYPD5Q6UWN5 251 aa9.37□□□□□ -0.91
PTCHD3-201ENST00000438700 C10orf25Q5T742 122 aa9.36□□□□□ -0.91
PTCHD3-201ENST00000438700 J3KT08 172 aa9.36□□□□□ -0.91
PTCHD3-201ENST00000438700 HUWE1Q7Z6Z7 4374 aaKnown RBP9.35□□□□□ -0.91
PTCHD3-201ENST00000438700 USP17L23D6RBM5 183 aa9.35□□□□□ -0.91
PTCHD3-201ENST00000438700 H0YGX0 51 aa9.35□□□□□ -0.91
PTCHD3-201ENST00000438700 SPAG11BQ08648 103 aa9.35□□□□□ -0.91
PTCHD3-201ENST00000438700 Q6JHZ5 121 aa9.35□□□□□ -0.91
PTCHD3-201ENST00000438700 DSCR8Q96T75 97 aa9.35□□□□□ -0.91
PTCHD3-201ENST00000438700 ENHOQ6UWT2 76 aa9.35□□□□□ -0.91
PTCHD3-201ENST00000438700 UNQ6190/PRO20217Q6UXQ8 127 aa9.35□□□□□ -0.91
PTCHD3-201ENST00000438700 UPK3BQ9BT76 320 aa9.35□□□□□ -0.91
PTCHD3-201ENST00000438700 OXTP01178 125 aa9.34□□□□□ -0.91
PTCHD3-201ENST00000438700 DNHD1Q96M86 4753 aa9.34□□□□□ -0.91
PTCHD3-201ENST00000438700 COX17Q14061 63 aa9.34□□□□□ -0.91
PTCHD3-201ENST00000438700 Q8NDZ9 215 aa9.34□□□□□ -0.91
PTCHD3-201ENST00000438700 PRR34Q9NV39 138 aa9.34□□□□□ -0.91
PTCHD3-201ENST00000438700 WFDC10BQ8IUB3 73 aa9.33□□□□□ -0.92
PTCHD3-201ENST00000438700 SERP2Q8N6R1 65 aa9.33□□□□□ -0.92
PTCHD3-201ENST00000438700 FAM19A1Q7Z5A9 133 aa9.32□□□□□ -0.92
PTCHD3-201ENST00000438700 DPH3Q96FX2 82 aa9.32□□□□□ -0.92
PTCHD3-201ENST00000438700 ORMDL1Q9P0S3 153 aa9.32□□□□□ -0.92
PTCHD3-201ENST00000438700 ESRGQ1W209 222 aa9.31□□□□□ -0.92
PTCHD3-201ENST00000438700 TRAV23DV6A0A075B6W5 121 aa9.3□□□□□ -0.92
PTCHD3-201ENST00000438700 TRAV10A0A0B4J240 114 aa9.3□□□□□ -0.92
PTCHD3-201ENST00000438700 CCKP06307 115 aa9.3□□□□□ -0.92
PTCHD3-201ENST00000438700 NDUFC2O95298 119 aa9.29□□□□□ -0.92
PTCHD3-201ENST00000438700 COL7A1Q02388 2944 aa9.28□□□□□ -0.92
PTCHD3-201ENST00000438700 STAB2Q8WWQ8 2551 aa9.27□□□□□ -0.92
PTCHD3-201ENST00000438700 HIGD2BQ4VC39 106 aa9.27□□□□□ -0.93
PTCHD3-201ENST00000438700 S100A7L2Q5SY68 101 aa9.27□□□□□ -0.93
PTCHD3-201ENST00000438700 Q8N814 137 aa9.27□□□□□ -0.93
PTCHD3-201ENST00000438700 GHRHP01286 108 aa9.26□□□□□ -0.93
PTCHD3-201ENST00000438700 RPS28P62857 69 aaKnown RBP9.26□□□□□ -0.93
PTCHD3-201ENST00000438700 C6orf99Q4VX62 202 aa9.26□□□□□ -0.93
PTCHD3-201ENST00000438700 TMEM258P61165 79 aa9.25□□□□□ -0.93
PTCHD3-201ENST00000438700 XAGE1AQ9HD64 81 aa9.25□□□□□ -0.93
PTCHD3-201ENST00000438700 C6orf48Q9UBA6 75 aa9.25□□□□□ -0.93
PTCHD3-201ENST00000438700 DNAH9Q9NYC9 4486 aa9.25□□□□□ -0.93
PTCHD3-201ENST00000438700 M0R2N4 97 aa9.25□□□□□ -0.93
PTCHD3-201ENST00000438700 C4orf26Q17RF5 130 aa9.25□□□□□ -0.93
PTCHD3-201ENST00000438700 B9D2Q9BPU9 175 aa9.25□□□□□ -0.93
PTCHD3-201ENST00000438700 C5orf47Q569G3 176 aa9.24□□□□□ -0.93
PTCHD3-201ENST00000438700 ZNF561-AS1K7EIQ3 104 aa9.22□□□□□ -0.93
PTCHD3-201ENST00000438700 LINC00167Q96N53 147 aa9.22□□□□□ -0.93
PTCHD3-201ENST00000438700 C20orf197Q8N268 126 aa9.22□□□□□ -0.93
PTCHD3-201ENST00000438700 LINC01556Q5JQF7 62 aa9.21□□□□□ -0.94
PTCHD3-201ENST00000438700 CAMK2N2Q96S95 79 aa9.21□□□□□ -0.94
PTCHD3-201ENST00000438700 JMJD7-PLA2G4BH0Y9G9 81 aa9.2□□□□□ -0.94
PTCHD3-201ENST00000438700 TMEM256-PLSCR3K7ERE1 68 aa9.2□□□□□ -0.94
PTCHD3-201ENST00000438700 KRTAP26-1Q6PEX3 210 aa9.2□□□□□ -0.94
PTCHD3-201ENST00000438700 LINC00588Q9Y4M8 146 aa9.2□□□□□ -0.94
PTCHD3-201ENST00000438700 GVQW2A0A096LPI5 108 aaPredicted RBP9.2□□□□□ -0.94
PTCHD3-201ENST00000438700 Q5XG85 94 aa9.19□□□□□ -0.94
PTCHD3-201ENST00000438700 HRCT1Q6UXD1 115 aa9.19□□□□□ -0.94
PTCHD3-201ENST00000438700 MUC7Q8TAX7 377 aa9.19□□□□□ -0.94
PTCHD3-201ENST00000438700 C15orf56Q8N910 161 aa9.18□□□□□ -0.94
PTCHD3-201ENST00000438700 IGKV2D-24A0A075B6R9 120 aa9.17□□□□□ -0.94
PTCHD3-201ENST00000438700 TRBV10-3A0A0K0K1G6 114 aa9.17□□□□□ -0.94
PTCHD3-201ENST00000438700 IGLV6-57P01721 117 aa9.17□□□□□ -0.94
PTCHD3-201ENST00000438700 Q6ZRU5 148 aa9.17□□□□□ -0.94
PTCHD3-201ENST00000438700 C1orf43Q9BWL3 253 aa9.17□□□□□ -0.94
PTCHD3-201ENST00000438700 DNAH10OSP0CZ25 163 aa9.17□□□□□ -0.94
PTCHD3-201ENST00000438700 LINC00575Q6W349 94 aa9.16□□□□□ -0.94
PTCHD3-201ENST00000438700 UBL5Q9BZL1 73 aa9.16□□□□□ -0.94
PTCHD3-201ENST00000438700 HAMPP81172 84 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms