RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 NDUFA6P56556 154 aa4.58□□□□□ -1.68
VPS50-204ENST00000438395 PMVKQ15126 192 aa4.58□□□□□ -1.68
VPS50-204ENST00000438395 IGLV5-37A0A075B6J1 123 aa4.57□□□□□ -1.68
VPS50-204ENST00000438395 ADCYAP1P18509 176 aa4.57□□□□□ -1.68
VPS50-204ENST00000438395 RPL24P83731 157 aaKnown RBP4.57□□□□□ -1.68
VPS50-204ENST00000438395 COX19Q49B96 90 aa4.57□□□□□ -1.68
VPS50-204ENST00000438395 FAM229BQ4G0N7 80 aa4.57□□□□□ -1.68
VPS50-204ENST00000438395 LINC00304Q8N9R0 145 aa4.57□□□□□ -1.68
VPS50-204ENST00000438395 GNB1LQ9BYB4 327 aa4.57□□□□□ -1.68
VPS50-204ENST00000438395 FABP9Q0Z7S8 132 aa4.56□□□□□ -1.68
VPS50-204ENST00000438395 UQCC3Q6UW78 93 aa4.56□□□□□ -1.68
VPS50-204ENST00000438395 FAM19A1Q7Z5A9 133 aa4.56□□□□□ -1.68
VPS50-204ENST00000438395 ANAPC11Q9NYG5 84 aa4.56□□□□□ -1.68
VPS50-204ENST00000438395 TMA7Q9Y2S6 64 aaKnown RBP4.56□□□□□ -1.68
VPS50-204ENST00000438395 PRLHP81277 87 aa4.55□□□□□ -1.68
VPS50-204ENST00000438395 CLLU1Q5K131 121 aa4.55□□□□□ -1.68
VPS50-204ENST00000438395 SFTA2Q6UW10 78 aa4.55□□□□□ -1.68
VPS50-204ENST00000438395 ERG28Q9UKR5 140 aa4.55□□□□□ -1.68
VPS50-204ENST00000438395 TMEM218A2RU14 115 aa4.54□□□□□ -1.68
VPS50-204ENST00000438395 ATP6V1G1O75348 118 aa4.54□□□□□ -1.68
VPS50-204ENST00000438395 SCO1O75880 301 aa4.54□□□□□ -1.68
VPS50-204ENST00000438395 RETNLBQ9BQ08 111 aa4.54□□□□□ -1.68
VPS50-204ENST00000438395 SEC11CQ9BY50 192 aa4.54□□□□□ -1.68
VPS50-204ENST00000438395 TMEM126AQ9H061 195 aa4.54□□□□□ -1.68
VPS50-204ENST00000438395 SND1-IT1Q9HBX3 110 aa4.54□□□□□ -1.68
VPS50-204ENST00000438395 IGLV7-46A0A075B6I9 117 aa4.53□□□□□ -1.68
VPS50-204ENST00000438395 IGLV5-39A0A0G2JS06 123 aa4.53□□□□□ -1.68
VPS50-204ENST00000438395 LINC01546A6NGU7 62 aa4.53□□□□□ -1.68
VPS50-204ENST00000438395 TMEM238C9JI98 176 aa4.53□□□□□ -1.68
VPS50-204ENST00000438395 HBDP02042 147 aa4.53□□□□□ -1.68
VPS50-204ENST00000438395 IGLC3P0DOY3 106 aa4.53□□□□□ -1.68
VPS50-204ENST00000438395 COX17Q14061 63 aa4.53□□□□□ -1.68
VPS50-204ENST00000438395 TMEM170BQ5T4T1 132 aa4.53□□□□□ -1.68
VPS50-204ENST00000438395 KRTAP13-1Q8IUC0 172 aa4.53□□□□□ -1.68
VPS50-204ENST00000438395 CBLN2Q8IUK8 224 aa4.53□□□□□ -1.68
VPS50-204ENST00000438395 ZNF625Q96I27 306 aaPredicted RBP4.53□□□□□ -1.68
VPS50-204ENST00000438395 HIGD2AQ9BW72 106 aa4.53□□□□□ -1.68
VPS50-204ENST00000438395 MUC2Q02817 5179 aa4.53□□□□□ -1.68
VPS50-204ENST00000438395 VPREB1P12018 145 aa4.52□□□□□ -1.69
VPS50-204ENST00000438395 ZNF22P17026 224 aaPredicted RBP4.52□□□□□ -1.69
VPS50-204ENST00000438395 LINC00158P58513 81 aa4.52□□□□□ -1.69
VPS50-204ENST00000438395 KRTAP13-2Q52LG2 175 aa4.52□□□□□ -1.69
VPS50-204ENST00000438395 ZNF706Q9Y5V0 76 aaPredicted RBP4.52□□□□□ -1.69
VPS50-204ENST00000438395 CTAG1AP78358 180 aa4.51□□□□□ -1.69
VPS50-204ENST00000438395 RHEBQ15382 184 aa4.51□□□□□ -1.69
VPS50-204ENST00000438395 TPRXLQ17RH7 258 aa4.51□□□□□ -1.69
VPS50-204ENST00000438395 BAGE3Q86Y29 109 aa4.51□□□□□ -1.69
VPS50-204ENST00000438395 RPS10P5Q9NQ39 176 aa4.51□□□□□ -1.69
VPS50-204ENST00000438395 C11orf86A6NJI1 115 aa4.5□□□□□ -1.69
VPS50-204ENST00000438395 M0R378 163 aa4.5□□□□□ -1.69
VPS50-204ENST00000438395 LINC00614P0C842 121 aa4.5□□□□□ -1.69
VPS50-204ENST00000438395 S100A12P80511 92 aa4.5□□□□□ -1.69
VPS50-204ENST00000438395 SPAG11AQ6PDA7 123 aa4.5□□□□□ -1.69
VPS50-204ENST00000438395 TRAPPC1Q9Y5R8 145 aa4.5□□□□□ -1.69
VPS50-204ENST00000438395 PMCHL1Q16048 86 aa4.49□□□□□ -1.69
VPS50-204ENST00000438395 MEIG1Q5JSS6 88 aa4.49□□□□□ -1.69
VPS50-204ENST00000438395 COMMD7Q86VX2 200 aa4.49□□□□□ -1.69
VPS50-204ENST00000438395 PLEKHB2Q96CS7 222 aa4.49□□□□□ -1.69
VPS50-204ENST00000438395 FAT4Q6V0I7 4981 aa4.48□□□□□ -1.69
VPS50-204ENST00000438395 A0A0U1RRA0 63 aa4.48□□□□□ -1.69
VPS50-204ENST00000438395 ETDCA0A1B0GVM5 59 aa4.48□□□□□ -1.69
VPS50-204ENST00000438395 BOD1L2Q8IYS8 172 aa4.48□□□□□ -1.69
VPS50-204ENST00000438395 C3orf22Q8N5N4 141 aa4.48□□□□□ -1.69
VPS50-204ENST00000438395 LINC00337Q8N6G1 96 aa4.48□□□□□ -1.69
VPS50-204ENST00000438395 C18orf32Q8TCD1 76 aa4.48□□□□□ -1.69
VPS50-204ENST00000438395 PPDPFQ9H3Y8 114 aa4.48□□□□□ -1.69
VPS50-204ENST00000438395 CHTOPQ9Y3Y2 248 aaKnown RBP4.48□□□□□ -1.69
VPS50-204ENST00000438395 A0A096LNJ9 63 aa4.47□□□□□ -1.69
VPS50-204ENST00000438395 LINC00587B1AMM8 73 aa4.47□□□□□ -1.69
VPS50-204ENST00000438395 PRYO14603 147 aa4.47□□□□□ -1.69
VPS50-204ENST00000438395 NDUFA5Q16718 116 aa4.47□□□□□ -1.69
VPS50-204ENST00000438395 FP248Q71RG6 208 aaPredicted RBP4.47□□□□□ -1.69
VPS50-204ENST00000438395 SPRR4Q96PI1 79 aa4.47□□□□□ -1.69
VPS50-204ENST00000438395 NDUFA12Q9UI09 145 aa4.47□□□□□ -1.69
VPS50-204ENST00000438395 NCR3O14931 201 aa4.46□□□□□ -1.7
VPS50-204ENST00000438395 HERV-K104P63124 156 aa4.46□□□□□ -1.7
VPS50-204ENST00000438395 Q8NBF4 154 aa4.46□□□□□ -1.7
VPS50-204ENST00000438395 MAP1LC3CQ9BXW4 147 aa4.46□□□□□ -1.7
VPS50-204ENST00000438395 SMIM13P0DJ93 91 aa4.45□□□□□ -1.7
VPS50-204ENST00000438395 MIR7-3HGQ8N6C7 128 aa4.45□□□□□ -1.7
VPS50-204ENST00000438395 Q8NDZ9 215 aa4.45□□□□□ -1.7
VPS50-204ENST00000438395 TRAV12-1A0A0B4J245 112 aa4.44□□□□□ -1.7
VPS50-204ENST00000438395 MYMXA0A1B0GTQ4 84 aa4.44□□□□□ -1.7
VPS50-204ENST00000438395 TMEM223A0PJW6 202 aa4.44□□□□□ -1.7
VPS50-204ENST00000438395 SNAPINO95295 136 aa4.44□□□□□ -1.7
VPS50-204ENST00000438395 SPINK1P00995 79 aa4.44□□□□□ -1.7
VPS50-204ENST00000438395 APOC3P02656 99 aa4.44□□□□□ -1.7
VPS50-204ENST00000438395 FAM19A2Q8N3H0 131 aa4.44□□□□□ -1.7
VPS50-204ENST00000438395 DAND5Q8N907 189 aa4.44□□□□□ -1.7
VPS50-204ENST00000438395 IFI27L1Q96BM0 104 aa4.44□□□□□ -1.7
VPS50-204ENST00000438395 CHCHD1Q96BP2 118 aaKnown RBP4.44□□□□□ -1.7
VPS50-204ENST00000438395 URB1-AS1Q96HZ7 61 aa4.44□□□□□ -1.7
VPS50-204ENST00000438395 MIEN1Q9BRT3 115 aa4.44□□□□□ -1.7
VPS50-204ENST00000438395 H0Y8G0 127 aa4.43□□□□□ -1.7
VPS50-204ENST00000438395 HSBP1O75506 76 aa4.43□□□□□ -1.7
VPS50-204ENST00000438395 SVBPQ8N300 66 aa4.43□□□□□ -1.7
VPS50-204ENST00000438395 KCNQ1DNQ9H478 68 aa4.43□□□□□ -1.7
VPS50-204ENST00000438395 IGLV9-49A0A0B4J1Y8 123 aa4.42□□□□□ -1.7
VPS50-204ENST00000438395 TRBV10-3A0A0K0K1G6 114 aa4.42□□□□□ -1.7
VPS50-204ENST00000438395 IFITM2Q01629 132 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms