RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 SEC11AP67812 179 aa5.23□□□□□ -1.57
HERPUD2-206ENST00000438224 PMVKQ15126 192 aa5.23□□□□□ -1.57
HERPUD2-206ENST00000438224 NDUFA5Q16718 116 aa5.23□□□□□ -1.57
HERPUD2-206ENST00000438224 PDZD11Q5EBL8 140 aa5.23□□□□□ -1.57
HERPUD2-206ENST00000438224 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
HERPUD2-206ENST00000438224 SLC7A5P1Q8MH63 180 aa5.23□□□□□ -1.57
HERPUD2-206ENST00000438224 LINC01549A6NIU2 74 aa5.22□□□□□ -1.57
HERPUD2-206ENST00000438224 LINC00614P0C842 121 aa5.22□□□□□ -1.57
HERPUD2-206ENST00000438224 PACRGQ96M98 296 aaPredicted RBP5.22□□□□□ -1.57
HERPUD2-206ENST00000438224 XAGE1AQ9HD64 81 aa5.22□□□□□ -1.57
HERPUD2-206ENST00000438224 F8VRH5 84 aa5.21□□□□□ -1.58
HERPUD2-206ENST00000438224 M0QXV9 152 aa5.21□□□□□ -1.58
HERPUD2-206ENST00000438224 HBDP02042 147 aa5.21□□□□□ -1.58
HERPUD2-206ENST00000438224 IGLC3P0DOY3 106 aa5.21□□□□□ -1.58
HERPUD2-206ENST00000438224 ZNF22P17026 224 aaPredicted RBP5.21□□□□□ -1.58
HERPUD2-206ENST00000438224 CKS1BP61024 79 aa5.21□□□□□ -1.58
HERPUD2-206ENST00000438224 SPINK6Q6UWN8 80 aa5.21□□□□□ -1.58
HERPUD2-206ENST00000438224 COX7B2Q8TF08 81 aa5.21□□□□□ -1.58
HERPUD2-206ENST00000438224 LINC01600Q96MT4 127 aa5.21□□□□□ -1.58
HERPUD2-206ENST00000438224 FAM218AQ96MZ4 157 aa5.21□□□□□ -1.58
HERPUD2-206ENST00000438224 C11orf86A6NJI1 115 aa5.2□□□□□ -1.58
HERPUD2-206ENST00000438224 C1orf137Q5JT78 98 aa5.2□□□□□ -1.58
HERPUD2-206ENST00000438224 TNXBP22105 4242 aa5.2□□□□□ -1.58
HERPUD2-206ENST00000438224 CXCL5P42830 114 aa5.19□□□□□ -1.58
HERPUD2-206ENST00000438224 NDUFA6P56556 154 aa5.19□□□□□ -1.58
HERPUD2-206ENST00000438224 KRTAP10-8P60410 259 aa5.19□□□□□ -1.58
HERPUD2-206ENST00000438224 IGLV7-43P04211 117 aa5.18□□□□□ -1.58
HERPUD2-206ENST00000438224 HSBP1L1C9JCN9 74 aa5.17□□□□□ -1.58
HERPUD2-206ENST00000438224 ATP5LO75964 103 aa5.17□□□□□ -1.58
HERPUD2-206ENST00000438224 TRGC2P03986 189 aa5.17□□□□□ -1.58
HERPUD2-206ENST00000438224 RAB5BP61020 215 aa5.17□□□□□ -1.58
HERPUD2-206ENST00000438224 BAGE3Q86Y29 109 aa5.17□□□□□ -1.58
HERPUD2-206ENST00000438224 FAM19A2Q8N3H0 131 aa5.17□□□□□ -1.58
HERPUD2-206ENST00000438224 C22orf24Q9Y442 160 aa5.17□□□□□ -1.58
HERPUD2-206ENST00000438224 H3BRM9 83 aa5.16□□□□□ -1.58
HERPUD2-206ENST00000438224 NUPR1O60356 82 aa5.16□□□□□ -1.58
HERPUD2-206ENST00000438224 UBE2BP63146 152 aa5.16□□□□□ -1.58
HERPUD2-206ENST00000438224 REG3GQ6UW15 175 aa5.16□□□□□ -1.58
HERPUD2-206ENST00000438224 CHCHD1Q96BP2 118 aaKnown RBP5.16□□□□□ -1.58
HERPUD2-206ENST00000438224 COLCA2A8K830 154 aa5.15□□□□□ -1.59
HERPUD2-206ENST00000438224 H0Y9J4 135 aa5.15□□□□□ -1.59
HERPUD2-206ENST00000438224 SCO1O75880 301 aa5.15□□□□□ -1.59
HERPUD2-206ENST00000438224 SERF1AO75920 110 aa5.15□□□□□ -1.59
HERPUD2-206ENST00000438224 KRTAP1-4P0C5Y4 121 aa5.15□□□□□ -1.59
HERPUD2-206ENST00000438224 Q8NDZ9 215 aa5.15□□□□□ -1.59
HERPUD2-206ENST00000438224 IFI27L1Q96BM0 104 aa5.15□□□□□ -1.59
HERPUD2-206ENST00000438224 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.59
HERPUD2-206ENST00000438224 TRAV12-1A0A0B4J245 112 aa5.14□□□□□ -1.59
HERPUD2-206ENST00000438224 TMEM223A0PJW6 202 aa5.14□□□□□ -1.59
HERPUD2-206ENST00000438224 PFN2P35080 140 aa5.14□□□□□ -1.59
HERPUD2-206ENST00000438224 TMEM170BQ5T4T1 132 aa5.14□□□□□ -1.59
HERPUD2-206ENST00000438224 ZNF625Q96I27 306 aaPredicted RBP5.14□□□□□ -1.59
HERPUD2-206ENST00000438224 TP73-AS1Q9UF72 201 aa5.14□□□□□ -1.59
HERPUD2-206ENST00000438224 RPL37AP8A6NKH3 93 aa5.13□□□□□ -1.59
HERPUD2-206ENST00000438224 MRPL55Q7Z7F7 128 aaKnown RBP5.13□□□□□ -1.59
HERPUD2-206ENST00000438224 DIRC1Q969H9 104 aa5.13□□□□□ -1.59
HERPUD2-206ENST00000438224 LINC00167Q96N53 147 aa5.13□□□□□ -1.59
HERPUD2-206ENST00000438224 ERG28Q9UKR5 140 aa5.13□□□□□ -1.59
HERPUD2-206ENST00000438224 HMCN2Q8NDA2 5059 aa5.13□□□□□ -1.59
HERPUD2-206ENST00000438224 HSBP1O75506 76 aa5.12□□□□□ -1.59
HERPUD2-206ENST00000438224 SND1-IT1Q9HBX3 110 aa5.12□□□□□ -1.59
HERPUD2-206ENST00000438224 ZNF861PO60384 105 aa5.1□□□□□ -1.59
HERPUD2-206ENST00000438224 TSPEAR-AS2P59090 65 aa5.1□□□□□ -1.59
HERPUD2-206ENST00000438224 KRTAP13-1Q8IUC0 172 aa5.1□□□□□ -1.59
HERPUD2-206ENST00000438224 BCE1O60756 84 aa5.09□□□□□ -1.59
HERPUD2-206ENST00000438224 LEPROTL1O95214 131 aa5.09□□□□□ -1.59
HERPUD2-206ENST00000438224 FABP4P15090 132 aa5.09□□□□□ -1.59
HERPUD2-206ENST00000438224 NKAPP1Q8N9T2 125 aa5.09□□□□□ -1.59
HERPUD2-206ENST00000438224 PMCHL2Q9BQD1 86 aa5.09□□□□□ -1.59
HERPUD2-206ENST00000438224 IGKV2-28A0A075B6P5 120 aa5.08□□□□□ -1.6
HERPUD2-206ENST00000438224 IGKV2D-28P01615 120 aa5.08□□□□□ -1.6
HERPUD2-206ENST00000438224 SMIM13P0DJ93 91 aa5.08□□□□□ -1.6
HERPUD2-206ENST00000438224 COX17Q14061 63 aa5.08□□□□□ -1.6
HERPUD2-206ENST00000438224 MTURNQ8N3F0 131 aa5.08□□□□□ -1.6
HERPUD2-206ENST00000438224 PRAC1Q96KF2 57 aa5.08□□□□□ -1.6
HERPUD2-206ENST00000438224 IGLV1-50A0A075B6I6 118 aa5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 A0A087X002 238 aa5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 TMEM238C9JI98 176 aa5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 HIST1H2BKO60814 126 aa5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 HIST1H2BJP06899 126 aa5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 HIST1H2BOP23527 126 aa5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 HIST1H2BBP33778 126 aa5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 LINC00158P58513 81 aa5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 HIST1H2BDP58876 126 aa5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 HIST1H2BCP62807 126 aa5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 HIST2H2BEQ16778 126 aa5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 HIST1H2BHQ93079 126 aa5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 HIST1H2BNQ99877 126 aa5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 HIST1H2BMQ99879 126 aa5.07□□□□□ -1.6
HERPUD2-206ENST00000438224 SFTA2Q6UW10 78 aa5.06□□□□□ -1.6
HERPUD2-206ENST00000438224 MIR7-3HGQ8N6C7 128 aa5.06□□□□□ -1.6
HERPUD2-206ENST00000438224 PPDPFQ9H3Y8 114 aa5.06□□□□□ -1.6
HERPUD2-206ENST00000438224 NDUFA12Q9UI09 145 aa5.06□□□□□ -1.6
HERPUD2-206ENST00000438224 LRP2P98164 4655 aa5.05□□□□□ -1.6
HERPUD2-206ENST00000438224 M0R378 163 aa5.05□□□□□ -1.6
HERPUD2-206ENST00000438224 LEPROTO15243 131 aa5.05□□□□□ -1.6
HERPUD2-206ENST00000438224 RPL28P46779 137 aaKnown RBP5.05□□□□□ -1.6
HERPUD2-206ENST00000438224 PRLHP81277 87 aa5.05□□□□□ -1.6
HERPUD2-206ENST00000438224 TMEM126AQ9H061 195 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms