RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 TMEM256-PLSCR3K7ERE1 68 aa11.4□□□□□ -0.58
TTC3-209ENST00000438055 OXLD1Q5BKU9 147 aa11.4□□□□□ -0.59
TTC3-209ENST00000438055 LINC01561Q8N1V8 128 aa11.39□□□□□ -0.59
TTC3-209ENST00000438055 JMJD7-PLA2G4BH0Y9G9 81 aa11.38□□□□□ -0.59
TTC3-209ENST00000438055 NANOS2P60321 138 aaKnown RBP11.38□□□□□ -0.59
TTC3-209ENST00000438055 NDUFC2O95298 119 aa11.38□□□□□ -0.59
TTC3-209ENST00000438055 A0A1B0GX51 115 aa11.37□□□□□ -0.59
TTC3-209ENST00000438055 CAMK2N2Q96S95 79 aa11.37□□□□□ -0.59
TTC3-209ENST00000438055 WFDC9Q8NEX5 89 aa11.37□□□□□ -0.59
TTC3-209ENST00000438055 Q8NDZ9 215 aa11.36□□□□□ -0.59
TTC3-209ENST00000438055 hADV29S1A0JD25 119 aa11.36□□□□□ -0.59
TTC3-209ENST00000438055 WFDC10BQ8IUB3 73 aa11.35□□□□□ -0.59
TTC3-209ENST00000438055 CCKP06307 115 aa11.34□□□□□ -0.59
TTC3-209ENST00000438055 LYPD5Q6UWN5 251 aa11.34□□□□□ -0.59
TTC3-209ENST00000438055 Q6ZQY7 126 aa11.34□□□□□ -0.59
TTC3-209ENST00000438055 MAST4O15021 2626 aa11.34□□□□□ -0.59
TTC3-209ENST00000438055 NOTCH1P46531 2555 aa11.34□□□□□ -0.59
TTC3-209ENST00000438055 KPRPQ5T749 579 aaPredicted RBP11.34□□□□□ -0.59
TTC3-209ENST00000438055 ENHOQ6UWT2 76 aa11.34□□□□□ -0.59
TTC3-209ENST00000438055 C3orf22Q8N5N4 141 aa11.34□□□□□ -0.59
TTC3-209ENST00000438055 UBL5Q9BZL1 73 aa11.34□□□□□ -0.59
TTC3-209ENST00000438055 ATOX1O00244 68 aa11.33□□□□□ -0.6
TTC3-209ENST00000438055 TRBV10-3A0A0K0K1G6 114 aa11.33□□□□□ -0.6
TTC3-209ENST00000438055 RBM3P98179 157 aaKnown RBP11.33□□□□□ -0.6
TTC3-209ENST00000438055 STAB1Q9NY15 2570 aa11.33□□□□□ -0.6
TTC3-209ENST00000438055 UQCRQO14949 82 aa11.32□□□□□ -0.6
TTC3-209ENST00000438055 Q6JHZ5 121 aa11.32□□□□□ -0.6
TTC3-209ENST00000438055 IGKV2D-24A0A075B6R9 120 aa11.31□□□□□ -0.6
TTC3-209ENST00000438055 LINC00575Q6W349 94 aa11.31□□□□□ -0.6
TTC3-209ENST00000438055 Q6ZTC4 211 aa11.31□□□□□ -0.6
TTC3-209ENST00000438055 HAMPP81172 84 aa11.31□□□□□ -0.6
TTC3-209ENST00000438055 C6orf48Q9UBA6 75 aa11.3□□□□□ -0.6
TTC3-209ENST00000438055 DIRC1Q969H9 104 aa11.3□□□□□ -0.6
TTC3-209ENST00000438055 DSCR8Q96T75 97 aa11.29□□□□□ -0.6
TTC3-209ENST00000438055 TRRAPQ9Y4A5 3859 aa11.29□□□□□ -0.6
TTC3-209ENST00000438055 TRAV23DV6A0A075B6W5 121 aa11.28□□□□□ -0.6
TTC3-209ENST00000438055 OBSCN-AS1Q96MR7 158 aa11.28□□□□□ -0.6
TTC3-209ENST00000438055 C1orf43Q9BWL3 253 aa11.28□□□□□ -0.6
TTC3-209ENST00000438055 USP17L23D6RBM5 183 aa11.28□□□□□ -0.6
TTC3-209ENST00000438055 COX7CP15954 63 aa11.27□□□□□ -0.6
TTC3-209ENST00000438055 A0A0J9YWU9 116 aa11.26□□□□□ -0.61
TTC3-209ENST00000438055 PRR34Q9NV39 138 aa11.26□□□□□ -0.61
TTC3-209ENST00000438055 FAM19A1Q7Z5A9 133 aa11.25□□□□□ -0.61
TTC3-209ENST00000438055 ZNF73O43830 326 aaPredicted RBP11.24□□□□□ -0.61
TTC3-209ENST00000438055 COX7BP24311 80 aa11.24□□□□□ -0.61
TTC3-209ENST00000438055 Q6ZRU5 148 aa11.23□□□□□ -0.61
TTC3-209ENST00000438055 LINC00167Q96N53 147 aa11.22□□□□□ -0.61
TTC3-209ENST00000438055 DEFB131BA0A096LNP1 70 aa11.21□□□□□ -0.61
TTC3-209ENST00000438055 GHRHP01286 108 aa11.21□□□□□ -0.61
TTC3-209ENST00000438055 IGLV6-57P01721 117 aa11.21□□□□□ -0.61
TTC3-209ENST00000438055 UPK3BQ9BT76 320 aa11.21□□□□□ -0.61
TTC3-209ENST00000438055 ESRGQ1W209 222 aa11.2□□□□□ -0.62
TTC3-209ENST00000438055 MUC7Q8TAX7 377 aa11.2□□□□□ -0.62
TTC3-209ENST00000438055 SCXQ7RTU7 201 aa11.19□□□□□ -0.62
TTC3-209ENST00000438055 SERP2Q8N6R1 65 aa11.19□□□□□ -0.62
TTC3-209ENST00000438055 DEFB105AQ8NG35 78 aa11.19□□□□□ -0.62
TTC3-209ENST00000438055 PKD1L1Q8TDX9 2849 aa11.19□□□□□ -0.62
TTC3-209ENST00000438055 C11orf45Q8TAV5 145 aa11.18□□□□□ -0.62
TTC3-209ENST00000438055 KMT2BQ9UMN6 2715 aaPredicted RBP11.18□□□□□ -0.62
TTC3-209ENST00000438055 M0R2N4 97 aa11.18□□□□□ -0.62
TTC3-209ENST00000438055 NKAPP1Q8N9T2 125 aa11.18□□□□□ -0.62
TTC3-209ENST00000438055 PRB2P02812 416 aaPredicted RBP11.17□□□□□ -0.62
TTC3-209ENST00000438055 KRTAP10-11P60412 298 aa11.17□□□□□ -0.62
TTC3-209ENST00000438055 EGFEM1PQ0D2K5 195 aa11.16□□□□□ -0.62
TTC3-209ENST00000438055 Q6ZQT0 140 aa11.16□□□□□ -0.62
TTC3-209ENST00000438055 TENM3Q9P273 2699 aa11.16□□□□□ -0.62
TTC3-209ENST00000438055 MRAPQ8TCY5 172 aa11.16□□□□□ -0.62
TTC3-209ENST00000438055 ATP5EP2Q5VTU8 51 aa11.15□□□□□ -0.62
TTC3-209ENST00000438055 GVQW2A0A096LPI5 108 aaPredicted RBP11.15□□□□□ -0.62
TTC3-209ENST00000438055 M0R378 163 aa11.15□□□□□ -0.63
TTC3-209ENST00000438055 COL6A5A8TX70 2615 aa11.14□□□□□ -0.63
TTC3-209ENST00000438055 SYCNQ0VAF6 134 aa11.14□□□□□ -0.63
TTC3-209ENST00000438055 NDUFC2-KCTD14E9PQ53 114 aa11.14□□□□□ -0.63
TTC3-209ENST00000438055 C2orf48Q96LS8 159 aa11.14□□□□□ -0.63
TTC3-209ENST00000438055 VPREB1P12018 145 aa11.13□□□□□ -0.63
TTC3-209ENST00000438055 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.12□□□□□ -0.63
TTC3-209ENST00000438055 Q6ZVQ6 151 aa11.12□□□□□ -0.63
TTC3-209ENST00000438055 C15orf56Q8N910 161 aa11.11□□□□□ -0.63
TTC3-209ENST00000438055 C20orf197Q8N268 126 aa11.11□□□□□ -0.63
TTC3-209ENST00000438055 CRYGAP11844 174 aa11.1□□□□□ -0.63
TTC3-209ENST00000438055 Q6ZRP5 223 aa11.1□□□□□ -0.63
TTC3-209ENST00000438055 LOC107984640A0A0U1RRK4 108 aa11.1□□□□□ -0.63
TTC3-209ENST00000438055 LINC01547P58512 204 aaPredicted RBP11.1□□□□□ -0.63
TTC3-209ENST00000438055 PDE6GP18545 87 aa11.09□□□□□ -0.63
TTC3-209ENST00000438055 CYSTM1Q9H1C7 97 aa11.09□□□□□ -0.63
TTC3-209ENST00000438055 ELOF1P60002 83 aaKnown RBP11.09□□□□□ -0.63
TTC3-209ENST00000438055 RPL37AP8A6NKH3 93 aa11.08□□□□□ -0.64
TTC3-209ENST00000438055 MGAM2Q2M2H8 2515 aa11.08□□□□□ -0.64
TTC3-209ENST00000438055 NBEAL1Q6ZS30 2694 aa11.07□□□□□ -0.64
TTC3-209ENST00000438055 LOC110117498A0A087WWA1 95 aa11.07□□□□□ -0.64
TTC3-209ENST00000438055 H3BNG1 76 aa11.07□□□□□ -0.64
TTC3-209ENST00000438055 KRTAP24-1Q3LI83 254 aa11.07□□□□□ -0.64
TTC3-209ENST00000438055 H3BQ85 93 aa11.06□□□□□ -0.64
TTC3-209ENST00000438055 BAHCC1Q9P281 2608 aa11.05□□□□□ -0.64
TTC3-209ENST00000438055 LINC01556Q5JQF7 62 aa11.05□□□□□ -0.64
TTC3-209ENST00000438055 C3orf84H3BNL1 204 aa11.04□□□□□ -0.64
TTC3-209ENST00000438055 WIPF1O43516 503 aa11.04□□□□□ -0.64
TTC3-209ENST00000438055 J3KT08 172 aa11.04□□□□□ -0.64
TTC3-209ENST00000438055 FBN1P35555 2871 aaKnown RBP11.03□□□□□ -0.64
TTC3-209ENST00000438055 KRTAP26-1Q6PEX3 210 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms