RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 GAGE2EQ4V326 116 aa12.75□□□□□ -0.37
CHRNA7-202ENST00000437966 GAGE2DQ9UEU5 116 aa12.75□□□□□ -0.37
CHRNA7-202ENST00000437966 TRIAP1O43715 76 aa12.74□□□□□ -0.37
CHRNA7-202ENST00000437966 KMT2AQ03164 3969 aa12.74□□□□□ -0.37
CHRNA7-202ENST00000437966 F8WDY8 70 aa12.74□□□□□ -0.37
CHRNA7-202ENST00000437966 LY6G6CO95867 125 aa12.74□□□□□ -0.37
CHRNA7-202ENST00000437966 Q6ZRP5 223 aa12.73□□□□□ -0.37
CHRNA7-202ENST00000437966 OR13C6PQ8NH95 151 aa12.73□□□□□ -0.37
CHRNA7-202ENST00000437966 TRAV13-2A0A0B4J235 113 aa12.72□□□□□ -0.37
CHRNA7-202ENST00000437966 NDUFC2-KCTD14E9PQ53 114 aa12.72□□□□□ -0.37
CHRNA7-202ENST00000437966 NCR3O14931 201 aa12.72□□□□□ -0.37
CHRNA7-202ENST00000437966 GTF2H5Q6ZYL4 71 aa12.72□□□□□ -0.37
CHRNA7-202ENST00000437966 Q6ZRN7 208 aaPredicted RBP12.71□□□□□ -0.38
CHRNA7-202ENST00000437966 H3BMG7 143 aa12.69□□□□□ -0.38
CHRNA7-202ENST00000437966 TCL1BO95988 128 aa12.69□□□□□ -0.38
CHRNA7-202ENST00000437966 DNAH2Q9P225 4427 aa12.69□□□□□ -0.38
CHRNA7-202ENST00000437966 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.69□□□□□ -0.38
CHRNA7-202ENST00000437966 NDUFC2O95298 119 aa12.69□□□□□ -0.38
CHRNA7-202ENST00000437966 RPL18AQ02543 176 aaKnown RBP12.69□□□□□ -0.38
CHRNA7-202ENST00000437966 LRCOL1A6NCL2 159 aa12.67□□□□□ -0.38
CHRNA7-202ENST00000437966 Q6ZR54 194 aa12.67□□□□□ -0.38
CHRNA7-202ENST00000437966 RNF151Q2KHN1 245 aa12.66□□□□□ -0.38
CHRNA7-202ENST00000437966 C9orf129Q5T035 196 aaKnown RBP12.66□□□□□ -0.38
CHRNA7-202ENST00000437966 MTURNQ8N3F0 131 aa12.66□□□□□ -0.38
CHRNA7-202ENST00000437966 SMIM11BQ8TCY0 68 aa12.66□□□□□ -0.38
CHRNA7-202ENST00000437966 CLEC2BQ92478 149 aa12.65□□□□□ -0.38
CHRNA7-202ENST00000437966 ALMS1Q8TCU4 4167 aa12.65□□□□□ -0.38
CHRNA7-202ENST00000437966 LINC00476Q8WZB0 136 aa12.64□□□□□ -0.39
CHRNA7-202ENST00000437966 GAGE2BQ13066 116 aa12.64□□□□□ -0.39
CHRNA7-202ENST00000437966 LYRM7Q5U5X0 104 aa12.64□□□□□ -0.39
CHRNA7-202ENST00000437966 C3orf84H3BNL1 204 aa12.63□□□□□ -0.39
CHRNA7-202ENST00000437966 TLX1NBP0CAT3 122 aa12.62□□□□□ -0.39
CHRNA7-202ENST00000437966 DNAH6Q9C0G6 4158 aa12.62□□□□□ -0.39
CHRNA7-202ENST00000437966 COX6CP09669 75 aa12.61□□□□□ -0.39
CHRNA7-202ENST00000437966 VPREB1P12018 145 aa12.61□□□□□ -0.39
CHRNA7-202ENST00000437966 RPL28P46779 137 aaKnown RBP12.61□□□□□ -0.39
CHRNA7-202ENST00000437966 C14orf177Q52M58 125 aa12.61□□□□□ -0.39
CHRNA7-202ENST00000437966 S100A7L2Q5SY68 101 aa12.61□□□□□ -0.39
CHRNA7-202ENST00000437966 TRBV20-1A0A075B6N2 111 aa12.6□□□□□ -0.39
CHRNA7-202ENST00000437966 CNBPP62633 177 aaKnown RBP12.6□□□□□ -0.39
CHRNA7-202ENST00000437966 FAM168BA1KXE4 195 aa12.59□□□□□ -0.39
CHRNA7-202ENST00000437966 SERTAD4-AS1Q5TG53 156 aa12.59□□□□□ -0.39
CHRNA7-202ENST00000437966 LOC107984640A0A0U1RRK4 108 aa12.58□□□□□ -0.39
CHRNA7-202ENST00000437966 TMEM126AQ9H061 195 aa12.58□□□□□ -0.39
CHRNA7-202ENST00000437966 LINC01620Q4KN68 170 aa12.58□□□□□ -0.4
CHRNA7-202ENST00000437966 HYDINQ4G0P3 5121 aa12.58□□□□□ -0.4
CHRNA7-202ENST00000437966 FUSP35637 526 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHRNA7-202ENST00000437966 ATXN8Q156A1 80 aa12.57□□□□□ -0.4
CHRNA7-202ENST00000437966 TRBV10-3A0A0K0K1G6 114 aa12.56□□□□□ -0.4
CHRNA7-202ENST00000437966 C1orf134Q5TEV5 83 aa12.56□□□□□ -0.4
CHRNA7-202ENST00000437966 A0A087WTM6 91 aa12.56□□□□□ -0.4
CHRNA7-202ENST00000437966 TRBV10-2A0A0K0K1G8 114 aa12.56□□□□□ -0.4
CHRNA7-202ENST00000437966 Q8N814 137 aa12.56□□□□□ -0.4
CHRNA7-202ENST00000437966 FAM218AQ96MZ4 157 aa12.56□□□□□ -0.4
CHRNA7-202ENST00000437966 PRO0461Q9UI25 63 aa12.56□□□□□ -0.4
CHRNA7-202ENST00000437966 IGLV6-57P01721 117 aa12.55□□□□□ -0.4
CHRNA7-202ENST00000437966 A0A096LNI7 61 aa12.53□□□□□ -0.4
CHRNA7-202ENST00000437966 IGKV2-24A0A0C4DH68 120 aa12.53□□□□□ -0.4
CHRNA7-202ENST00000437966 M0R378 163 aa12.53□□□□□ -0.4
CHRNA7-202ENST00000437966 LST1O00453 97 aa12.53□□□□□ -0.4
CHRNA7-202ENST00000437966 SMCPP49901 116 aaPredicted RBP12.53□□□□□ -0.4
CHRNA7-202ENST00000437966 KRTAP7-1Q8IUC3 87 aa12.53□□□□□ -0.4
CHRNA7-202ENST00000437966 C9JAW5 83 aa12.52□□□□□ -0.41
CHRNA7-202ENST00000437966 DNAH17Q9UFH2 4485 aa12.52□□□□□ -0.41
CHRNA7-202ENST00000437966 FAM19A5Q7Z5A7 132 aaPredicted RBP12.51□□□□□ -0.41
CHRNA7-202ENST00000437966 HECTD4Q9Y4D8 3996 aa12.51□□□□□ -0.41
CHRNA7-202ENST00000437966 F8W1H4 67 aa12.51□□□□□ -0.41
CHRNA7-202ENST00000437966 C6orf99Q4VX62 202 aa12.51□□□□□ -0.41
CHRNA7-202ENST00000437966 NKAPP1Q8N9T2 125 aa12.51□□□□□ -0.41
CHRNA7-202ENST00000437966 A0A087WYN8 130 aa12.5□□□□□ -0.41
CHRNA7-202ENST00000437966 C9orf163Q8N9P6 203 aa12.5□□□□□ -0.41
CHRNA7-202ENST00000437966 CHTF8P0CG12 524 aa12.49□□□□□ -0.41
CHRNA7-202ENST00000437966 C7orf33Q8WU49 177 aa12.49□□□□□ -0.41
CHRNA7-202ENST00000437966 PLA2G2DQ9UNK4 145 aa12.48□□□□□ -0.41
CHRNA7-202ENST00000437966 TRAV23DV6A0A075B6W5 121 aa12.48□□□□□ -0.41
CHRNA7-202ENST00000437966 C16orf90A8MZG2 172 aa12.48□□□□□ -0.41
CHRNA7-202ENST00000437966 C22orf24Q9Y442 160 aa12.47□□□□□ -0.41
CHRNA7-202ENST00000437966 FRAS1Q86XX4 4008 aa12.47□□□□□ -0.41
CHRNA7-202ENST00000437966 H0YGX0 51 aa12.46□□□□□ -0.41
CHRNA7-202ENST00000437966 A0A1W2PNN7 141 aa12.46□□□□□ -0.42
CHRNA7-202ENST00000437966 RPL37AP8A6NKH3 93 aa12.46□□□□□ -0.42
CHRNA7-202ENST00000437966 SLC25A20O43772 301 aa12.46□□□□□ -0.42
CHRNA7-202ENST00000437966 TNP2Q05952 138 aa12.46□□□□□ -0.42
CHRNA7-202ENST00000437966 SDIM1Q6ZPB5 146 aa12.45□□□□□ -0.42
CHRNA7-202ENST00000437966 IGLV5-37A0A075B6J1 123 aa12.43□□□□□ -0.42
CHRNA7-202ENST00000437966 ETDBQ3ZM63 59 aa12.43□□□□□ -0.42
CHRNA7-202ENST00000437966 LINC00167Q96N53 147 aa12.43□□□□□ -0.42
CHRNA7-202ENST00000437966 ZNF73O43830 326 aaPredicted RBP12.43□□□□□ -0.42
CHRNA7-202ENST00000437966 PANO1I0J062 215 aa12.42□□□□□ -0.42
CHRNA7-202ENST00000437966 RTL8CO15255 209 aa12.42□□□□□ -0.42
CHRNA7-202ENST00000437966 TRACP01848 142 aa12.41□□□□□ -0.42
CHRNA7-202ENST00000437966 SACSQ9NZJ4 4579 aa12.41□□□□□ -0.42
CHRNA7-202ENST00000437966 DIRC1Q969H9 104 aa12.41□□□□□ -0.42
CHRNA7-202ENST00000437966 MRPL55Q7Z7F7 128 aaKnown RBP12.4□□□□□ -0.42
CHRNA7-202ENST00000437966 ANKRD29Q8N6D5 301 aa12.4□□□□□ -0.42
CHRNA7-202ENST00000437966 DNAH11Q96DT5 4516 aa12.39□□□□□ -0.43
CHRNA7-202ENST00000437966 IGLV1-50A0A075B6I6 118 aa12.38□□□□□ -0.43
CHRNA7-202ENST00000437966 M0QXV9 152 aa12.38□□□□□ -0.43
CHRNA7-202ENST00000437966 LINC00575Q6W349 94 aa12.37□□□□□ -0.43
CHRNA7-202ENST00000437966 DPH3Q96FX2 82 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms