RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 CARD19Q96LW7 228 aa4.54□□□□□ -1.68
LSM3P3-201ENST00000436601 SPANXB1Q9NS25 103 aaPredicted RBP4.54□□□□□ -1.68
LSM3P3-201ENST00000436601 PCP4L1A6NKN8 68 aa4.53□□□□□ -1.68
LSM3P3-201ENST00000436601 LINC00587B1AMM8 73 aa4.53□□□□□ -1.68
LSM3P3-201ENST00000436601 TMEM238C9JI98 176 aa4.53□□□□□ -1.68
LSM3P3-201ENST00000436601 FUSP35637 526 aaKnown RBP eCLIP4.53□□□□□ -1.68
LSM3P3-201ENST00000436601 CTAG1AP78358 180 aa4.53□□□□□ -1.68
LSM3P3-201ENST00000436601 CIRBPQ14011 172 aaKnown RBP4.53□□□□□ -1.68
LSM3P3-201ENST00000436601 COX17Q14061 63 aa4.53□□□□□ -1.68
LSM3P3-201ENST00000436601 MIR7-3HGQ8N6C7 128 aa4.53□□□□□ -1.68
LSM3P3-201ENST00000436601 SPANXDQ9BXN6 97 aa4.53□□□□□ -1.68
LSM3P3-201ENST00000436601 SPANXCQ9NY87 97 aa4.53□□□□□ -1.68
LSM3P3-201ENST00000436601 VPS13DQ5THJ4 4388 aa4.52□□□□□ -1.69
LSM3P3-201ENST00000436601 SRSF9Q13242 221 aaKnown RBP eCLIP4.52□□□□□ -1.69
LSM3P3-201ENST00000436601 SOSTDC1Q6X4U4 206 aa4.52□□□□□ -1.69
LSM3P3-201ENST00000436601 MUSTN1Q8IVN3 82 aa4.52□□□□□ -1.69
LSM3P3-201ENST00000436601 C9orf163Q8N9P6 203 aa4.52□□□□□ -1.69
LSM3P3-201ENST00000436601 HIST1H4GQ99525 98 aa4.52□□□□□ -1.69
LSM3P3-201ENST00000436601 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.51□□□□□ -1.69
LSM3P3-201ENST00000436601 NDUFC2-KCTD14E9PQ53 114 aa4.51□□□□□ -1.69
LSM3P3-201ENST00000436601 TLX1NBP0CAT3 122 aa4.51□□□□□ -1.69
LSM3P3-201ENST00000436601 NPC2P61916 151 aa4.51□□□□□ -1.69
LSM3P3-201ENST00000436601 HSD52Q0P140 79 aa4.51□□□□□ -1.69
LSM3P3-201ENST00000436601 TAL2Q16559 108 aa4.51□□□□□ -1.69
LSM3P3-201ENST00000436601 LINC01620Q4KN68 170 aa4.51□□□□□ -1.69
LSM3P3-201ENST00000436601 SDIM1Q6ZPB5 146 aa4.51□□□□□ -1.69
LSM3P3-201ENST00000436601 Q6ZRP5 223 aa4.51□□□□□ -1.69
LSM3P3-201ENST00000436601 Q6ZVH6 145 aa4.51□□□□□ -1.69
LSM3P3-201ENST00000436601 LINC00308Q8TCZ7 52 aa4.51□□□□□ -1.69
LSM3P3-201ENST00000436601 SND1-IT1Q9HBX3 110 aa4.51□□□□□ -1.69
LSM3P3-201ENST00000436601 LOC107984156A0A0G2JMH3 177 aa4.5□□□□□ -1.69
LSM3P3-201ENST00000436601 LOC107984640A0A0U1RRK4 108 aa4.5□□□□□ -1.69
LSM3P3-201ENST00000436601 IFITM1P13164 125 aa4.5□□□□□ -1.69
LSM3P3-201ENST00000436601 LINC00336Q6ZUF6 198 aa4.5□□□□□ -1.69
LSM3P3-201ENST00000436601 ARL17AQ8IVW1 177 aa4.5□□□□□ -1.69
LSM3P3-201ENST00000436601 CEND1Q8N111 149 aa4.5□□□□□ -1.69
LSM3P3-201ENST00000436601 LYSTQ99698 3801 aa4.5□□□□□ -1.69
LSM3P3-201ENST00000436601 XAGE1AQ9HD64 81 aa4.5□□□□□ -1.69
LSM3P3-201ENST00000436601 ALMS1Q8TCU4 4167 aa4.49□□□□□ -1.69
LSM3P3-201ENST00000436601 A0A096LNI7 61 aa4.49□□□□□ -1.69
LSM3P3-201ENST00000436601 HINT1P49773 126 aaPredicted RBP4.49□□□□□ -1.69
LSM3P3-201ENST00000436601 RPL18AQ02543 176 aaKnown RBP4.49□□□□□ -1.69
LSM3P3-201ENST00000436601 C9orf129Q5T035 196 aaKnown RBP4.49□□□□□ -1.69
LSM3P3-201ENST00000436601 BVES-AS1Q5T3Y7 98 aa4.49□□□□□ -1.69
LSM3P3-201ENST00000436601 Q8NDZ9 215 aa4.49□□□□□ -1.69
LSM3P3-201ENST00000436601 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
LSM3P3-201ENST00000436601 PPDPFQ9H3Y8 114 aa4.49□□□□□ -1.69
LSM3P3-201ENST00000436601 A0A1B0GVY2 172 aa4.48□□□□□ -1.69
LSM3P3-201ENST00000436601 C16orf90A8MZG2 172 aa4.48□□□□□ -1.69
LSM3P3-201ENST00000436601 FXYD2P54710 66 aa4.48□□□□□ -1.69
LSM3P3-201ENST00000436601 RPL24P83731 157 aaKnown RBP4.48□□□□□ -1.69
LSM3P3-201ENST00000436601 KRTAP7-1Q8IUC3 87 aa4.48□□□□□ -1.69
LSM3P3-201ENST00000436601 FAM168BA1KXE4 195 aa4.47□□□□□ -1.69
LSM3P3-201ENST00000436601 PANO1I0J062 215 aa4.47□□□□□ -1.69
LSM3P3-201ENST00000436601 CHTF8P0CG12 524 aa4.47□□□□□ -1.69
LSM3P3-201ENST00000436601 PRR3P79522 188 aaKnown RBP4.47□□□□□ -1.69
LSM3P3-201ENST00000436601 SNHG12Q9BXW3 62 aa4.47□□□□□ -1.69
LSM3P3-201ENST00000436601 HYDINQ4G0P3 5121 aa4.47□□□□□ -1.69
LSM3P3-201ENST00000436601 IGKV2-28A0A075B6P5 120 aa4.46□□□□□ -1.7
LSM3P3-201ENST00000436601 IGKV2-24A0A0C4DH68 120 aa4.46□□□□□ -1.7
LSM3P3-201ENST00000436601 M0R143 59 aa4.46□□□□□ -1.7
LSM3P3-201ENST00000436601 NDUFC2O95298 119 aa4.46□□□□□ -1.7
LSM3P3-201ENST00000436601 IGKV2D-28P01615 120 aa4.46□□□□□ -1.7
LSM3P3-201ENST00000436601 CFC1BP0CG36 223 aa4.46□□□□□ -1.7
LSM3P3-201ENST00000436601 CFC1P0CG37 223 aa4.46□□□□□ -1.7
LSM3P3-201ENST00000436601 COPS9Q8WXC6 57 aa4.46□□□□□ -1.7
LSM3P3-201ENST00000436601 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
LSM3P3-201ENST00000436601 RYR2Q92736 4967 aa4.46□□□□□ -1.7
LSM3P3-201ENST00000436601 A0A1B0GWB2 263 aa4.45□□□□□ -1.7
LSM3P3-201ENST00000436601 A0A1W2PNN7 141 aa4.45□□□□□ -1.7
LSM3P3-201ENST00000436601 K7ERJ3 54 aa4.45□□□□□ -1.7
LSM3P3-201ENST00000436601 KRTAP10-1P60331 282 aa4.45□□□□□ -1.7
LSM3P3-201ENST00000436601 BATFQ16520 125 aa4.45□□□□□ -1.7
LSM3P3-201ENST00000436601 PKIGQ9Y2B9 76 aa4.45□□□□□ -1.7
LSM3P3-201ENST00000436601 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
LSM3P3-201ENST00000436601 EPM2AB3EWF7 344 aa4.44□□□□□ -1.7
LSM3P3-201ENST00000436601 NCR3O14931 201 aa4.44□□□□□ -1.7
LSM3P3-201ENST00000436601 LINC00337Q8N6G1 96 aa4.44□□□□□ -1.7
LSM3P3-201ENST00000436601 SPACA4Q8TDM5 124 aa4.44□□□□□ -1.7
LSM3P3-201ENST00000436601 NHP2Q9NX24 153 aaKnown RBP4.44□□□□□ -1.7
LSM3P3-201ENST00000436601 LINC00474Q9P2X8 69 aa4.44□□□□□ -1.7
LSM3P3-201ENST00000436601 KMT2AQ03164 3969 aa4.44□□□□□ -1.7
LSM3P3-201ENST00000436601 KMT2CQ8NEZ4 4911 aaKnown RBP4.43□□□□□ -1.7
LSM3P3-201ENST00000436601 A0A0B4J2C4 111 aa4.43□□□□□ -1.7
LSM3P3-201ENST00000436601 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
LSM3P3-201ENST00000436601 FAM19A5Q7Z5A7 132 aaPredicted RBP4.43□□□□□ -1.7
LSM3P3-201ENST00000436601 C22orf24Q9Y442 160 aa4.43□□□□□ -1.7
LSM3P3-201ENST00000436601 A0A087WYN8 130 aa4.42□□□□□ -1.7
LSM3P3-201ENST00000436601 TRBV10-2A0A0K0K1G8 114 aa4.42□□□□□ -1.7
LSM3P3-201ENST00000436601 A6NDN8 102 aa4.42□□□□□ -1.7
LSM3P3-201ENST00000436601 M0R378 163 aa4.42□□□□□ -1.7
LSM3P3-201ENST00000436601 Q6ZSA8 131 aa4.42□□□□□ -1.7
LSM3P3-201ENST00000436601 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
LSM3P3-201ENST00000436601 RAB37Q96AX2 223 aa4.42□□□□□ -1.7
LSM3P3-201ENST00000436601 DPH3Q96FX2 82 aa4.42□□□□□ -1.7
LSM3P3-201ENST00000436601 PRO1854Q9UHT4 67 aa4.42□□□□□ -1.7
LSM3P3-201ENST00000436601 SACSQ9NZJ4 4579 aa4.41□□□□□ -1.7
LSM3P3-201ENST00000436601 DNAH10Q8IVF4 4471 aa4.41□□□□□ -1.7
LSM3P3-201ENST00000436601 TRAV13-2A0A0B4J235 113 aa4.41□□□□□ -1.7
LSM3P3-201ENST00000436601 IGLV6-57P01721 117 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms