RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 CXCL5P42830 114 aa6.7□□□□□ -1.34
LINC00271-202ENST00000436554 FAM19A2Q8N3H0 131 aa6.7□□□□□ -1.34
LINC00271-202ENST00000436554 ATP5LO75964 103 aa6.69□□□□□ -1.34
LINC00271-202ENST00000436554 TMEM170BQ5T4T1 132 aa6.69□□□□□ -1.34
LINC00271-202ENST00000436554 ZNF625Q96I27 306 aaPredicted RBP6.69□□□□□ -1.34
LINC00271-202ENST00000436554 PFN2P35080 140 aa6.68□□□□□ -1.34
LINC00271-202ENST00000436554 LINC00304Q8N9R0 145 aa6.68□□□□□ -1.34
LINC00271-202ENST00000436554 CHCHD1Q96BP2 118 aaKnown RBP6.68□□□□□ -1.34
LINC00271-202ENST00000436554 CHTOPQ9Y3Y2 248 aaKnown RBP6.68□□□□□ -1.34
LINC00271-202ENST00000436554 IGLV5-39A0A0G2JS06 123 aa6.67□□□□□ -1.34
LINC00271-202ENST00000436554 GAGE10A6NGK3 116 aa6.67□□□□□ -1.34
LINC00271-202ENST00000436554 RPL37AP8A6NKH3 93 aa6.67□□□□□ -1.34
LINC00271-202ENST00000436554 H0Y8G0 127 aa6.67□□□□□ -1.34
LINC00271-202ENST00000436554 MRPL55Q7Z7F7 128 aaKnown RBP6.67□□□□□ -1.34
LINC00271-202ENST00000436554 IFI27L1Q96BM0 104 aa6.67□□□□□ -1.34
LINC00271-202ENST00000436554 HSBP1O75506 76 aa6.66□□□□□ -1.34
LINC00271-202ENST00000436554 SCO1O75880 301 aa6.66□□□□□ -1.34
LINC00271-202ENST00000436554 LINC01547P58512 204 aaPredicted RBP6.66□□□□□ -1.34
LINC00271-202ENST00000436554 PPDPFQ9H3Y8 114 aa6.66□□□□□ -1.34
LINC00271-202ENST00000436554 TP73-AS1Q9UF72 201 aa6.66□□□□□ -1.34
LINC00271-202ENST00000436554 LINC00310P59036 64 aa6.65□□□□□ -1.34
LINC00271-202ENST00000436554 LINC00167Q96N53 147 aa6.65□□□□□ -1.34
LINC00271-202ENST00000436554 COLCA2A8K830 154 aa6.64□□□□□ -1.35
LINC00271-202ENST00000436554 SERF1AO75920 110 aa6.64□□□□□ -1.35
LINC00271-202ENST00000436554 FAM229BQ4G0N7 80 aa6.64□□□□□ -1.35
LINC00271-202ENST00000436554 IGKV2D-26A0A0A0MRZ7 120 aa6.63□□□□□ -1.35
LINC00271-202ENST00000436554 A0A0U1RRA0 63 aa6.63□□□□□ -1.35
LINC00271-202ENST00000436554 FABP4P15090 132 aa6.63□□□□□ -1.35
LINC00271-202ENST00000436554 ERG28Q9UKR5 140 aa6.63□□□□□ -1.35
LINC00271-202ENST00000436554 TRAV12-1A0A0B4J245 112 aa6.62□□□□□ -1.35
LINC00271-202ENST00000436554 TMEM223A0PJW6 202 aa6.62□□□□□ -1.35
LINC00271-202ENST00000436554 UBE2AP49459 152 aa6.62□□□□□ -1.35
LINC00271-202ENST00000436554 KRTAP13-1Q8IUC0 172 aa6.62□□□□□ -1.35
LINC00271-202ENST00000436554 NKAPP1Q8N9T2 125 aa6.62□□□□□ -1.35
LINC00271-202ENST00000436554 SND1-IT1Q9HBX3 110 aa6.62□□□□□ -1.35
LINC00271-202ENST00000436554 IGKV2-28A0A075B6P5 120 aa6.61□□□□□ -1.35
LINC00271-202ENST00000436554 LEPROTL1O95214 131 aa6.61□□□□□ -1.35
LINC00271-202ENST00000436554 IGKV2D-28P01615 120 aa6.61□□□□□ -1.35
LINC00271-202ENST00000436554 PMCHL2Q9BQD1 86 aa6.61□□□□□ -1.35
LINC00271-202ENST00000436554 LINC00158P58513 81 aa6.6□□□□□ -1.35
LINC00271-202ENST00000436554 CTAG1AP78358 180 aa6.6□□□□□ -1.35
LINC00271-202ENST00000436554 LINC00337Q8N6G1 96 aa6.6□□□□□ -1.35
LINC00271-202ENST00000436554 Q8NDZ9 215 aa6.6□□□□□ -1.35
LINC00271-202ENST00000436554 KRTAP4-1Q9BYQ7 146 aa6.6□□□□□ -1.35
LINC00271-202ENST00000436554 IGLV5-37A0A075B6J1 123 aa6.58□□□□□ -1.36
LINC00271-202ENST00000436554 SMIM13P0DJ93 91 aa6.58□□□□□ -1.36
LINC00271-202ENST00000436554 VPREB1P12018 145 aa6.58□□□□□ -1.36
LINC00271-202ENST00000436554 ASB16-AS1Q495Z4 193 aa6.58□□□□□ -1.36
LINC00271-202ENST00000436554 COX17Q14061 63 aa6.57□□□□□ -1.36
LINC00271-202ENST00000436554 C3orf22Q8N5N4 141 aa6.57□□□□□ -1.36
LINC00271-202ENST00000436554 A6NJY4 79 aa6.56□□□□□ -1.36
LINC00271-202ENST00000436554 TMEM238C9JI98 176 aa6.56□□□□□ -1.36
LINC00271-202ENST00000436554 TSPEAR-AS2P59090 65 aa6.56□□□□□ -1.36
LINC00271-202ENST00000436554 MEIG1Q5JSS6 88 aa6.56□□□□□ -1.36
LINC00271-202ENST00000436554 LCE3BQ5TA77 95 aa6.56□□□□□ -1.36
LINC00271-202ENST00000436554 NDUFA12Q9UI09 145 aa6.56□□□□□ -1.36
LINC00271-202ENST00000436554 HSPB8Q9UJY1 196 aa6.56□□□□□ -1.36
LINC00271-202ENST00000436554 ATP6V1G1O75348 118 aa6.55□□□□□ -1.36
LINC00271-202ENST00000436554 PRLHP81277 87 aa6.55□□□□□ -1.36
LINC00271-202ENST00000436554 KRTAP13-3Q3SY46 172 aa6.55□□□□□ -1.36
LINC00271-202ENST00000436554 SPAG11AQ6PDA7 123 aa6.55□□□□□ -1.36
LINC00271-202ENST00000436554 SFTA2Q6UW10 78 aa6.55□□□□□ -1.36
LINC00271-202ENST00000436554 FP248Q71RG6 208 aaPredicted RBP6.55□□□□□ -1.36
LINC00271-202ENST00000436554 HIST1H2BKO60814 126 aa6.54□□□□□ -1.36
LINC00271-202ENST00000436554 DPM2O94777 84 aa6.54□□□□□ -1.36
LINC00271-202ENST00000436554 HIST1H2BJP06899 126 aa6.54□□□□□ -1.36
LINC00271-202ENST00000436554 HIST1H2BOP23527 126 aa6.54□□□□□ -1.36
LINC00271-202ENST00000436554 HIST1H2BBP33778 126 aa6.54□□□□□ -1.36
LINC00271-202ENST00000436554 HIST1H2BDP58876 126 aa6.54□□□□□ -1.36
LINC00271-202ENST00000436554 HIST1H2BCP62807 126 aa6.54□□□□□ -1.36
LINC00271-202ENST00000436554 RPL24P83731 157 aaKnown RBP6.54□□□□□ -1.36
LINC00271-202ENST00000436554 HIST2H2BEQ16778 126 aa6.54□□□□□ -1.36
LINC00271-202ENST00000436554 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.54□□□□□ -1.36
LINC00271-202ENST00000436554 MIR7-3HGQ8N6C7 128 aa6.54□□□□□ -1.36
LINC00271-202ENST00000436554 DAND5Q8N907 189 aa6.54□□□□□ -1.36
LINC00271-202ENST00000436554 HIST1H2BHQ93079 126 aa6.54□□□□□ -1.36
LINC00271-202ENST00000436554 PLEKHB2Q96CS7 222 aa6.54□□□□□ -1.36
LINC00271-202ENST00000436554 HIST1H2BNQ99877 126 aa6.54□□□□□ -1.36
LINC00271-202ENST00000436554 HIST1H2BMQ99879 126 aa6.54□□□□□ -1.36
LINC00271-202ENST00000436554 NCR3O14931 201 aa6.53□□□□□ -1.36
LINC00271-202ENST00000436554 PLNP26678 52 aa6.53□□□□□ -1.36
LINC00271-202ENST00000436554 SEC61BP60468 96 aaKnown RBP6.53□□□□□ -1.36
LINC00271-202ENST00000436554 FAM19A1Q7Z5A9 133 aa6.53□□□□□ -1.36
LINC00271-202ENST00000436554 BOD1L2Q8IYS8 172 aa6.53□□□□□ -1.36
LINC00271-202ENST00000436554 TMEM126AQ9H061 195 aa6.53□□□□□ -1.36
LINC00271-202ENST00000436554 MYMXA0A1B0GTQ4 84 aa6.52□□□□□ -1.37
LINC00271-202ENST00000436554 LEPROTO15243 131 aa6.52□□□□□ -1.37
LINC00271-202ENST00000436554 IGKCP01834 107 aa6.52□□□□□ -1.37
LINC00271-202ENST00000436554 HERV-K104P63124 156 aa6.52□□□□□ -1.37
LINC00271-202ENST00000436554 KRTAP4-12Q9BQ66 201 aa6.52□□□□□ -1.37
LINC00271-202ENST00000436554 MAP1LC3CQ9BXW4 147 aa6.52□□□□□ -1.37
LINC00271-202ENST00000436554 J3QQQ9 107 aa6.51□□□□□ -1.37
LINC00271-202ENST00000436554 M0R378 163 aa6.51□□□□□ -1.37
LINC00271-202ENST00000436554 HERVK_113P61574 105 aa6.5□□□□□ -1.37
LINC00271-202ENST00000436554 LGALS3P17931 250 aaKnown RBP6.49□□□□□ -1.37
LINC00271-202ENST00000436554 SYS1-DBNDD2H3BUS1 97 aa6.48□□□□□ -1.37
LINC00271-202ENST00000436554 NPC2P61916 151 aa6.48□□□□□ -1.37
LINC00271-202ENST00000436554 HIGD2AQ9BW72 106 aa6.48□□□□□ -1.37
LINC00271-202ENST00000436554 Q8NBF4 154 aa6.47□□□□□ -1.37
LINC00271-202ENST00000436554 TRBV10-3A0A0K0K1G6 114 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms