RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 FUSP35637 526 aaKnown RBP eCLIP14.78□□□□□ -0.04
CPSF4-204ENST00000436336 TMEM238LA0A1B0GVL6 79 aa14.77□□□□□ -0.05
CPSF4-204ENST00000436336 A6NJY4 79 aa14.77□□□□□ -0.05
CPSF4-204ENST00000436336 C16orf90A8MZG2 172 aa14.77□□□□□ -0.05
CPSF4-204ENST00000436336 KRTAP10-2P60368 255 aa14.77□□□□□ -0.05
CPSF4-204ENST00000436336 LINC01620Q4KN68 170 aa14.77□□□□□ -0.05
CPSF4-204ENST00000436336 SDIM1Q6ZPB5 146 aa14.77□□□□□ -0.05
CPSF4-204ENST00000436336 PGPEP1Q9NXJ5 209 aa14.77□□□□□ -0.05
CPSF4-204ENST00000436336 HECTD4Q9Y4D8 3996 aa14.76□□□□□ -0.05
CPSF4-204ENST00000436336 A4D1N5 150 aa14.76□□□□□ -0.05
CPSF4-204ENST00000436336 A0A096LNI7 61 aa14.75□□□□□ -0.05
CPSF4-204ENST00000436336 C9orf129Q5T035 196 aaKnown RBP14.75□□□□□ -0.05
CPSF4-204ENST00000436336 PKD1P98161 4303 aa14.74□□□□□ -0.05
CPSF4-204ENST00000436336 NDUFC2O95298 119 aa14.72□□□□□ -0.05
CPSF4-204ENST00000436336 BATFQ16520 125 aa14.72□□□□□ -0.05
CPSF4-204ENST00000436336 IGKV2-24A0A0C4DH68 120 aa14.71□□□□□ -0.05
CPSF4-204ENST00000436336 DNAH5Q8TE73 4624 aa14.71□□□□□ -0.06
CPSF4-204ENST00000436336 RYR3Q15413 4870 aa14.71□□□□□ -0.06
CPSF4-204ENST00000436336 SNHG12Q9BXW3 62 aa14.7□□□□□ -0.06
CPSF4-204ENST00000436336 LINC00474Q9P2X8 69 aa14.7□□□□□ -0.06
CPSF4-204ENST00000436336 NHP2Q9NX24 153 aaKnown RBP14.69□□□□□ -0.06
CPSF4-204ENST00000436336 PLA2G2DQ9UNK4 145 aa14.69□□□□□ -0.06
CPSF4-204ENST00000436336 Q8NDZ9 215 aa14.69□□□□□ -0.06
CPSF4-204ENST00000436336 A6NDN8 102 aa14.68□□□□□ -0.06
CPSF4-204ENST00000436336 A0A1B0GVY2 172 aa14.67□□□□□ -0.06
CPSF4-204ENST00000436336 CHTF8P0CG12 524 aa14.67□□□□□ -0.06
CPSF4-204ENST00000436336 CFC1BP0CG36 223 aa14.67□□□□□ -0.06
CPSF4-204ENST00000436336 CFC1P0CG37 223 aa14.67□□□□□ -0.06
CPSF4-204ENST00000436336 VPREB1P12018 145 aa14.66□□□□□ -0.06
CPSF4-204ENST00000436336 A0A0B4J2C4 111 aa14.66□□□□□ -0.06
CPSF4-204ENST00000436336 A0A1B0GWB2 263 aa14.66□□□□□ -0.06
CPSF4-204ENST00000436336 IGKV2-28A0A075B6P5 120 aa14.65□□□□□ -0.06
CPSF4-204ENST00000436336 IGKV2D-28P01615 120 aa14.65□□□□□ -0.06
CPSF4-204ENST00000436336 FAM168BA1KXE4 195 aa14.63□□□□□ -0.07
CPSF4-204ENST00000436336 PRR3P79522 188 aaKnown RBP14.63□□□□□ -0.07
CPSF4-204ENST00000436336 SERTAD4-AS1Q5TG53 156 aa14.63□□□□□ -0.07
CPSF4-204ENST00000436336 RAB37Q96AX2 223 aa14.63□□□□□ -0.07
CPSF4-204ENST00000436336 SPACA4Q8TDM5 124 aa14.63□□□□□ -0.07
CPSF4-204ENST00000436336 TRBV10-2A0A0K0K1G8 114 aa14.62□□□□□ -0.07
CPSF4-204ENST00000436336 NCR3O14931 201 aa14.62□□□□□ -0.07
CPSF4-204ENST00000436336 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.62□□□□□ -0.07
CPSF4-204ENST00000436336 IGLV5-37A0A075B6J1 123 aa14.61□□□□□ -0.07
CPSF4-204ENST00000436336 PANO1I0J062 215 aa14.61□□□□□ -0.07
CPSF4-204ENST00000436336 TRAV13-2A0A0B4J235 113 aa14.61□□□□□ -0.07
CPSF4-204ENST00000436336 K7ERJ3 54 aa14.61□□□□□ -0.07
CPSF4-204ENST00000436336 LINC00337Q8N6G1 96 aa14.61□□□□□ -0.07
CPSF4-204ENST00000436336 NKAPP1Q8N9T2 125 aa14.61□□□□□ -0.07
CPSF4-204ENST00000436336 FAM19A5Q7Z5A7 132 aaPredicted RBP14.6□□□□□ -0.07
CPSF4-204ENST00000436336 KRTAP7-1Q8IUC3 87 aa14.6□□□□□ -0.07
CPSF4-204ENST00000436336 PRO1854Q9UHT4 67 aa14.6□□□□□ -0.07
CPSF4-204ENST00000436336 A0A1W2PNN7 141 aa14.59□□□□□ -0.07
CPSF4-204ENST00000436336 M0R378 163 aa14.58□□□□□ -0.07
CPSF4-204ENST00000436336 DPH3Q96FX2 82 aa14.58□□□□□ -0.07
CPSF4-204ENST00000436336 KRTAP10-1P60331 282 aa14.57□□□□□ -0.08
CPSF4-204ENST00000436336 C22orf24Q9Y442 160 aa14.57□□□□□ -0.08
CPSF4-204ENST00000436336 COL5A1-AS1Q5SY13 56 aa14.56□□□□□ -0.08
CPSF4-204ENST00000436336 OR13C6PQ8NH95 151 aa14.56□□□□□ -0.08
CPSF4-204ENST00000436336 DNAH8Q96JB1 4490 aa14.56□□□□□ -0.08
CPSF4-204ENST00000436336 S100A7L2Q5SY68 101 aa14.55□□□□□ -0.08
CPSF4-204ENST00000436336 RPL13AP40429 203 aaKnown RBP14.55□□□□□ -0.08
CPSF4-204ENST00000436336 TMEM126AQ9H061 195 aa14.55□□□□□ -0.08
CPSF4-204ENST00000436336 A0A087WYN8 130 aa14.53□□□□□ -0.08
CPSF4-204ENST00000436336 M0QXV9 152 aa14.53□□□□□ -0.08
CPSF4-204ENST00000436336 MRPL55Q7Z7F7 128 aaKnown RBP14.53□□□□□ -0.08
CPSF4-204ENST00000436336 C7orf33Q8WU49 177 aa14.53□□□□□ -0.08
CPSF4-204ENST00000436336 EPM2AB3EWF7 344 aa14.52□□□□□ -0.08
CPSF4-204ENST00000436336 Q6ZSA8 131 aa14.52□□□□□ -0.08
CPSF4-204ENST00000436336 IGLV6-57P01721 117 aa14.52□□□□□ -0.09
CPSF4-204ENST00000436336 PLAC8Q9NZF1 115 aa14.51□□□□□ -0.09
CPSF4-204ENST00000436336 FAM30AQ9NZY2 134 aa14.51□□□□□ -0.09
CPSF4-204ENST00000436336 TRBV10-3A0A0K0K1G6 114 aa14.5□□□□□ -0.09
CPSF4-204ENST00000436336 LBHQ53QV2 105 aaPredicted RBP14.5□□□□□ -0.09
CPSF4-204ENST00000436336 H7C2G1 150 aa14.49□□□□□ -0.09
CPSF4-204ENST00000436336 TAX1BP3O14907 124 aa14.49□□□□□ -0.09
CPSF4-204ENST00000436336 LINC00167Q96N53 147 aa14.49□□□□□ -0.09
CPSF4-204ENST00000436336 GAGE10A6NGK3 116 aa14.49□□□□□ -0.09
CPSF4-204ENST00000436336 TSPAN13O95857 204 aa14.48□□□□□ -0.09
CPSF4-204ENST00000436336 Q1RN00 199 aa14.48□□□□□ -0.09
CPSF4-204ENST00000436336 PKHD1P08F94 4074 aa14.47□□□□□ -0.09
CPSF4-204ENST00000436336 IGLV1-50A0A075B6I6 118 aa14.46□□□□□ -0.1
CPSF4-204ENST00000436336 PHF5AQ7RTV0 110 aaKnown RBP14.46□□□□□ -0.1
CPSF4-204ENST00000436336 CBY1Q9Y3M2 126 aa14.46□□□□□ -0.1
CPSF4-204ENST00000436336 SMIM11BQ8TCY0 68 aa14.44□□□□□ -0.1
CPSF4-204ENST00000436336 RPL37AP8A6NKH3 93 aa14.44□□□□□ -0.1
CPSF4-204ENST00000436336 DYNC1H1Q14204 4646 aaKnown RBP14.43□□□□□ -0.1
CPSF4-204ENST00000436336 TRAV23DV6A0A075B6W5 121 aa14.43□□□□□ -0.1
CPSF4-204ENST00000436336 C9orf118A6NHY6 69 aa14.43□□□□□ -0.1
CPSF4-204ENST00000436336 RPL28P46779 137 aaKnown RBP14.43□□□□□ -0.1
CPSF4-204ENST00000436336 CIRBP-AS1Q8TBR5 109 aa14.43□□□□□ -0.1
CPSF4-204ENST00000436336 LRP1BQ9NZR2 4599 aa14.43□□□□□ -0.1
CPSF4-204ENST00000436336 KCNQ1DNQ9H478 68 aa14.42□□□□□ -0.1
CPSF4-204ENST00000436336 SCXQ7RTU7 201 aa14.41□□□□□ -0.1
CPSF4-204ENST00000436336 UBE2BP63146 152 aa14.41□□□□□ -0.1
CPSF4-204ENST00000436336 H3BUT2 72 aa14.4□□□□□ -0.1
CPSF4-204ENST00000436336 PSMB2P49721 201 aa14.4□□□□□ -0.1
CPSF4-204ENST00000436336 NAA38Q9BRA0 125 aaKnown RBP14.4□□□□□ -0.1
CPSF4-204ENST00000436336 PRYO14603 147 aa14.39□□□□□ -0.11
CPSF4-204ENST00000436336 TRIAP1O43715 76 aa14.38□□□□□ -0.11
CPSF4-204ENST00000436336 ZNF73O43830 326 aaPredicted RBP14.37□□□□□ -0.11
CPSF4-204ENST00000436336 C6orf99Q4VX62 202 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms