RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 LINC00158P58513 81 aa10.97□□□□□ -0.65
HMGN1-207ENST00000436324 VPREB1P12018 145 aa10.96□□□□□ -0.65
HMGN1-207ENST00000436324 LINC00310P59036 64 aa10.96□□□□□ -0.65
HMGN1-207ENST00000436324 SFTA2Q6UW10 78 aa10.96□□□□□ -0.65
HMGN1-207ENST00000436324 COLCA2A8K830 154 aa10.94□□□□□ -0.66
HMGN1-207ENST00000436324 LEPROTL1O95214 131 aa10.94□□□□□ -0.66
HMGN1-207ENST00000436324 UBE2AP49459 152 aa10.94□□□□□ -0.66
HMGN1-207ENST00000436324 RPL24P83731 157 aaKnown RBP10.94□□□□□ -0.66
HMGN1-207ENST00000436324 Q8NDZ9 215 aa10.94□□□□□ -0.66
HMGN1-207ENST00000436324 FABP4P15090 132 aa10.93□□□□□ -0.66
HMGN1-207ENST00000436324 SMIM13P0DJ93 91 aa10.91□□□□□ -0.66
HMGN1-207ENST00000436324 RPL13AP40429 203 aaKnown RBP10.91□□□□□ -0.66
HMGN1-207ENST00000436324 MEIG1Q5JSS6 88 aa10.91□□□□□ -0.66
HMGN1-207ENST00000436324 TMEM238C9JI98 176 aa10.9□□□□□ -0.66
HMGN1-207ENST00000436324 ATP6V1G1O75348 118 aa10.9□□□□□ -0.66
HMGN1-207ENST00000436324 HSPB8Q9UJY1 196 aa10.89□□□□□ -0.67
HMGN1-207ENST00000436324 UBR4Q5T4S7 5183 aa10.88□□□□□ -0.67
HMGN1-207ENST00000436324 FAM19A1Q7Z5A9 133 aa10.88□□□□□ -0.67
HMGN1-207ENST00000436324 KRTAP13-1Q8IUC0 172 aa10.88□□□□□ -0.67
HMGN1-207ENST00000436324 PMCHL2Q9BQD1 86 aa10.88□□□□□ -0.67
HMGN1-207ENST00000436324 ANAPC11Q9NYG5 84 aa10.88□□□□□ -0.67
HMGN1-207ENST00000436324 NDUFA12Q9UI09 145 aa10.88□□□□□ -0.67
HMGN1-207ENST00000436324 PRLHP81277 87 aa10.87□□□□□ -0.67
HMGN1-207ENST00000436324 TMEM126AQ9H061 195 aa10.87□□□□□ -0.67
HMGN1-207ENST00000436324 HERV-K104P63124 156 aa10.86□□□□□ -0.67
HMGN1-207ENST00000436324 MIR7-3HGQ8N6C7 128 aa10.86□□□□□ -0.67
HMGN1-207ENST00000436324 A0A087X002 238 aa10.85□□□□□ -0.67
HMGN1-207ENST00000436324 MYMXA0A1B0GTQ4 84 aa10.85□□□□□ -0.67
HMGN1-207ENST00000436324 M0R378 163 aa10.85□□□□□ -0.67
HMGN1-207ENST00000436324 TSPEAR-AS2P59090 65 aa10.85□□□□□ -0.67
HMGN1-207ENST00000436324 LEPROTO15243 131 aa10.84□□□□□ -0.67
HMGN1-207ENST00000436324 DPM2O94777 84 aa10.84□□□□□ -0.67
HMGN1-207ENST00000436324 PLNP26678 52 aa10.84□□□□□ -0.67
HMGN1-207ENST00000436324 BOD1L2Q8IYS8 172 aa10.84□□□□□ -0.67
HMGN1-207ENST00000436324 CRYGAP11844 174 aa10.83□□□□□ -0.68
HMGN1-207ENST00000436324 PLEKHB2Q96CS7 222 aa10.83□□□□□ -0.68
HMGN1-207ENST00000436324 NCR3O14931 201 aa10.82□□□□□ -0.68
HMGN1-207ENST00000436324 IGKCP01834 107 aa10.82□□□□□ -0.68
HMGN1-207ENST00000436324 TYMSOSQ8TAI1 123 aa10.82□□□□□ -0.68
HMGN1-207ENST00000436324 LINC00587B1AMM8 73 aa10.81□□□□□ -0.68
HMGN1-207ENST00000436324 TSPAN13O95857 204 aa10.81□□□□□ -0.68
HMGN1-207ENST00000436324 HERVK_113P61574 105 aa10.81□□□□□ -0.68
HMGN1-207ENST00000436324 MAP1LC3CQ9BXW4 147 aa10.81□□□□□ -0.68
HMGN1-207ENST00000436324 J3QQQ9 107 aa10.8□□□□□ -0.68
HMGN1-207ENST00000436324 DAND5Q8N907 189 aa10.8□□□□□ -0.68
HMGN1-207ENST00000436324 HIST1H2BKO60814 126 aa10.79□□□□□ -0.68
HMGN1-207ENST00000436324 HIST1H2BJP06899 126 aa10.79□□□□□ -0.68
HMGN1-207ENST00000436324 HIST1H2BOP23527 126 aa10.79□□□□□ -0.68
HMGN1-207ENST00000436324 HIST1H2BBP33778 126 aa10.79□□□□□ -0.68
HMGN1-207ENST00000436324 HIST1H2BDP58876 126 aa10.79□□□□□ -0.68
HMGN1-207ENST00000436324 HIST1H2BCP62807 126 aa10.79□□□□□ -0.68
HMGN1-207ENST00000436324 HIST2H2BEQ16778 126 aa10.79□□□□□ -0.68
HMGN1-207ENST00000436324 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.79□□□□□ -0.68
HMGN1-207ENST00000436324 HIST1H2BHQ93079 126 aa10.79□□□□□ -0.68
HMGN1-207ENST00000436324 HIST1H2BNQ99877 126 aa10.79□□□□□ -0.68
HMGN1-207ENST00000436324 HIST1H2BMQ99879 126 aa10.79□□□□□ -0.68
HMGN1-207ENST00000436324 LRP2P98164 4655 aa10.79□□□□□ -0.68
HMGN1-207ENST00000436324 LGALS3P17931 250 aaKnown RBP10.78□□□□□ -0.68
HMGN1-207ENST00000436324 KRTAP13-2Q52LG2 175 aa10.78□□□□□ -0.68
HMGN1-207ENST00000436324 HIGD2AQ9BW72 106 aa10.78□□□□□ -0.68
HMGN1-207ENST00000436324 PRR4Q16378 134 aa10.77□□□□□ -0.69
HMGN1-207ENST00000436324 FAM229BQ4G0N7 80 aa10.75□□□□□ -0.69
HMGN1-207ENST00000436324 PRYO14603 147 aa10.74□□□□□ -0.69
HMGN1-207ENST00000436324 NMUP48645 174 aa10.74□□□□□ -0.69
HMGN1-207ENST00000436324 IGKV2D-26A0A0A0MRZ7 120 aa10.73□□□□□ -0.69
HMGN1-207ENST00000436324 TRBV10-3A0A0K0K1G6 114 aa10.73□□□□□ -0.69
HMGN1-207ENST00000436324 SYS1-DBNDD2H3BUS1 97 aa10.73□□□□□ -0.69
HMGN1-207ENST00000436324 LORP23490 312 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-207ENST00000436324 KCNQ1DNQ9H478 68 aa10.71□□□□□ -0.69
HMGN1-207ENST00000436324 ETDCA0A1B0GVM5 59 aa10.7□□□□□ -0.7
HMGN1-207ENST00000436324 E9PLD3 99 aa10.7□□□□□ -0.7
HMGN1-207ENST00000436324 NPC2P61916 151 aa10.7□□□□□ -0.7
HMGN1-207ENST00000436324 MIEN1Q9BRT3 115 aa10.7□□□□□ -0.7
HMGN1-207ENST00000436324 LOC107984156A0A0G2JMH3 177 aa10.69□□□□□ -0.7
HMGN1-207ENST00000436324 ARL17AQ8IVW1 177 aa10.69□□□□□ -0.7
HMGN1-207ENST00000436324 C3orf22Q8N5N4 141 aa10.69□□□□□ -0.7
HMGN1-207ENST00000436324 A0A0J9YXY3 114 aa10.68□□□□□ -0.7
HMGN1-207ENST00000436324 SPRR1AP35321 89 aa10.68□□□□□ -0.7
HMGN1-207ENST00000436324 LINC00337Q8N6G1 96 aa10.68□□□□□ -0.7
HMGN1-207ENST00000436324 LINC00304Q8N9R0 145 aa10.68□□□□□ -0.7
HMGN1-207ENST00000436324 SPRR4Q96PI1 79 aa10.68□□□□□ -0.7
HMGN1-207ENST00000436324 LPAP08519 4548 aa10.68□□□□□ -0.7
HMGN1-207ENST00000436324 DDTP30046 118 aa10.67□□□□□ -0.7
HMGN1-207ENST00000436324 S100A12P80511 92 aa10.67□□□□□ -0.7
HMGN1-207ENST00000436324 ADAMTSL4-AS1Q5T5F5 129 aa10.67□□□□□ -0.7
HMGN1-207ENST00000436324 LINC01545Q5VT33 79 aa10.67□□□□□ -0.7
HMGN1-207ENST00000436324 SMCR5Q8TEV8 140 aa10.67□□□□□ -0.7
HMGN1-207ENST00000436324 TRBV10-2A0A0K0K1G8 114 aa10.66□□□□□ -0.7
HMGN1-207ENST00000436324 KRTAP4-16G5E9R7 235 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-207ENST00000436324 PET117Q6UWS5 81 aa10.66□□□□□ -0.7
HMGN1-207ENST00000436324 EIF4EBP3O60516 100 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-207ENST00000436324 C3orf79P0CE67 100 aa10.65□□□□□ -0.7
HMGN1-207ENST00000436324 SOSTDC1Q6X4U4 206 aa10.65□□□□□ -0.7
HMGN1-207ENST00000436324 SPANXB1Q9NS25 103 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-207ENST00000436324 S100A7L2Q5SY68 101 aa10.64□□□□□ -0.71
HMGN1-207ENST00000436324 PPDPFQ9H3Y8 114 aa10.64□□□□□ -0.71
HMGN1-207ENST00000436324 ZNF706Q9Y5V0 76 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-207ENST00000436324 KRTDAPP60985 99 aa10.63□□□□□ -0.71
HMGN1-207ENST00000436324 RETNLBQ9BQ08 111 aa10.63□□□□□ -0.71
HMGN1-207ENST00000436324 B5MCH6 92 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms