RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 NBDYA0A0U1RRE5 68 aa7.84□□□□□ -1.15
SCN4A-201ENST00000435607 TRAV22A0A0B4J277 110 aa7.84□□□□□ -1.15
SCN4A-201ENST00000435607 H3BPC8 53 aa7.83□□□□□ -1.16
SCN4A-201ENST00000435607 Q6ZPA2 131 aa7.83□□□□□ -1.16
SCN4A-201ENST00000435607 IGF2RP11717 2491 aa7.83□□□□□ -1.16
SCN4A-201ENST00000435607 LINC00167Q96N53 147 aa7.83□□□□□ -1.16
SCN4A-201ENST00000435607 ZNF462Q96JM2 2506 aa7.83□□□□□ -1.16
SCN4A-201ENST00000435607 NCOR2Q9Y618 2525 aa7.82□□□□□ -1.16
SCN4A-201ENST00000435607 CDIP1Q9H305 208 aa7.81□□□□□ -1.16
SCN4A-201ENST00000435607 A0A087WVE0 104 aa7.81□□□□□ -1.16
SCN4A-201ENST00000435607 CEP350Q5VT06 3117 aa7.81□□□□□ -1.16
SCN4A-201ENST00000435607 LINC00315P59091 139 aa7.81□□□□□ -1.16
SCN4A-201ENST00000435607 SERTAD4-AS1Q5TG53 156 aa7.81□□□□□ -1.16
SCN4A-201ENST00000435607 YPEL4Q96NS1 127 aa7.81□□□□□ -1.16
SCN4A-201ENST00000435607 C8orf87E5RJ46 101 aa7.8□□□□□ -1.16
SCN4A-201ENST00000435607 GAS8-AS1O95177 125 aa7.8□□□□□ -1.16
SCN4A-201ENST00000435607 A8MTW9 85 aa7.79□□□□□ -1.16
SCN4A-201ENST00000435607 PTPRBP23467 1997 aa7.79□□□□□ -1.16
SCN4A-201ENST00000435607 ADAMTSL4-AS1Q5T5F5 129 aa7.79□□□□□ -1.16
SCN4A-201ENST00000435607 SMIM29Q86T20 159 aa7.78□□□□□ -1.16
SCN4A-201ENST00000435607 BRCA2P51587 3418 aa7.78□□□□□ -1.16
SCN4A-201ENST00000435607 PHF5AQ7RTV0 110 aaKnown RBP7.78□□□□□ -1.16
SCN4A-201ENST00000435607 COL4A3Q01955 1670 aa7.77□□□□□ -1.17
SCN4A-201ENST00000435607 BCE1O60756 84 aa7.77□□□□□ -1.17
SCN4A-201ENST00000435607 CHTF8P0CG12 524 aa7.77□□□□□ -1.17
SCN4A-201ENST00000435607 Q6ZSN1 163 aa7.77□□□□□ -1.17
SCN4A-201ENST00000435607 USP9XQ93008 2570 aaPredicted RBP7.76□□□□□ -1.17
SCN4A-201ENST00000435607 CRIPTQ9P021 101 aa7.76□□□□□ -1.17
SCN4A-201ENST00000435607 RBM12B-AS1Q9P1G2 102 aa7.76□□□□□ -1.17
SCN4A-201ENST00000435607 CRIP3Q6Q6R5 217 aa7.76□□□□□ -1.17
SCN4A-201ENST00000435607 Q9UF83 564 aa7.75□□□□□ -1.17
SCN4A-201ENST00000435607 EPM2AB3EWF7 344 aa7.75□□□□□ -1.17
SCN4A-201ENST00000435607 MKI67P46013 3256 aaKnown RBP7.75□□□□□ -1.17
SCN4A-201ENST00000435607 COX8CQ7Z4L0 72 aa7.75□□□□□ -1.17
SCN4A-201ENST00000435607 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
SCN4A-201ENST00000435607 TSPEAR-AS2P59090 65 aa7.74□□□□□ -1.17
SCN4A-201ENST00000435607 C11orf72Q8NBR9 251 aa7.74□□□□□ -1.17
SCN4A-201ENST00000435607 SPATA3Q8NHX4 192 aa7.74□□□□□ -1.17
SCN4A-201ENST00000435607 LINC00476Q8WZB0 136 aa7.73□□□□□ -1.17
SCN4A-201ENST00000435607 VPREB1P12018 145 aa7.73□□□□□ -1.17
SCN4A-201ENST00000435607 LINC00846Q9NV44 126 aa7.73□□□□□ -1.17
SCN4A-201ENST00000435607 IGLV8-61A0A075B6I0 122 aa7.73□□□□□ -1.17
SCN4A-201ENST00000435607 Q6ZRX8 168 aa7.72□□□□□ -1.17
SCN4A-201ENST00000435607 C5orf42Q9H799 3197 aa7.72□□□□□ -1.17
SCN4A-201ENST00000435607 LINC00304Q8N9R0 145 aa7.71□□□□□ -1.18
SCN4A-201ENST00000435607 KRTAP24-1Q3LI83 254 aa7.71□□□□□ -1.18
SCN4A-201ENST00000435607 ELOF1P60002 83 aaKnown RBP7.71□□□□□ -1.18
SCN4A-201ENST00000435607 SSBP3-AS1Q7Z2R9 100 aa7.71□□□□□ -1.18
SCN4A-201ENST00000435607 APLNQ9ULZ1 77 aa7.7□□□□□ -1.18
SCN4A-201ENST00000435607 IGHV3OR16-9A0A0B4J2B5 98 aa7.69□□□□□ -1.18
SCN4A-201ENST00000435607 COL27A1Q8IZC6 1860 aaPredicted RBP7.69□□□□□ -1.18
SCN4A-201ENST00000435607 ST20-AS1Q8NBB2 130 aa7.68□□□□□ -1.18
SCN4A-201ENST00000435607 PKD1L2Q7Z442 2459 aa7.68□□□□□ -1.18
SCN4A-201ENST00000435607 LINC00588Q9Y4M8 146 aa7.67□□□□□ -1.18
SCN4A-201ENST00000435607 MUC22E2RYF6 1773 aaPredicted RBP7.67□□□□□ -1.18
SCN4A-201ENST00000435607 IGLV5-39A0A0G2JS06 123 aa7.67□□□□□ -1.18
SCN4A-201ENST00000435607 GVQW2A0A096LPI5 108 aaPredicted RBP7.67□□□□□ -1.18
SCN4A-201ENST00000435607 LINC00336Q6ZUF6 198 aa7.66□□□□□ -1.18
SCN4A-201ENST00000435607 LINC01600Q96MT4 127 aa7.66□□□□□ -1.18
SCN4A-201ENST00000435607 IGLV5-37A0A075B6J1 123 aa7.66□□□□□ -1.18
SCN4A-201ENST00000435607 A0A1W2PPR1 153 aa7.66□□□□□ -1.18
SCN4A-201ENST00000435607 MRPL34Q9BQ48 92 aaKnown RBP7.65□□□□□ -1.18
SCN4A-201ENST00000435607 DNAH10OSP0CZ25 163 aa7.65□□□□□ -1.19
SCN4A-201ENST00000435607 WDR87Q6ZQQ6 2873 aa7.64□□□□□ -1.19
SCN4A-201ENST00000435607 SETD2Q9BYW2 2564 aaPredicted RBP7.64□□□□□ -1.19
SCN4A-201ENST00000435607 A8MWP4 228 aa7.64□□□□□ -1.19
SCN4A-201ENST00000435607 LAMA3Q16787 3333 aa7.64□□□□□ -1.19
SCN4A-201ENST00000435607 TRBV7-4A0A0J9YYF1 115 aa7.64□□□□□ -1.19
SCN4A-201ENST00000435607 CHD8Q9HCK8 2581 aa7.63□□□□□ -1.19
SCN4A-201ENST00000435607 UQCR11O14957 56 aa7.63□□□□□ -1.19
SCN4A-201ENST00000435607 FAM19A4Q96LR4 140 aa7.63□□□□□ -1.19
SCN4A-201ENST00000435607 ANKRD17O75179 2603 aaKnown RBP7.63□□□□□ -1.19
SCN4A-201ENST00000435607 LOC110117498A0A087WWA1 95 aa7.62□□□□□ -1.19
SCN4A-201ENST00000435607 Q8NAQ8 132 aa7.6□□□□□ -1.19
SCN4A-201ENST00000435607 PRO0628Q9UI54 55 aa7.59□□□□□ -1.19
SCN4A-201ENST00000435607 Q6ZQT0 140 aa7.58□□□□□ -1.2
SCN4A-201ENST00000435607 XIRP2A4UGR9 3374 aa7.57□□□□□ -1.2
SCN4A-201ENST00000435607 C9orf92A6NGG3 77 aa7.57□□□□□ -1.2
SCN4A-201ENST00000435607 URB1-AS1Q96HZ7 61 aa7.57□□□□□ -1.2
SCN4A-201ENST00000435607 ZNF861PO60384 105 aa7.57□□□□□ -1.2
SCN4A-201ENST00000435607 OBSCN-AS1Q96MR7 158 aa7.56□□□□□ -1.2
SCN4A-201ENST00000435607 IGLV5-45A0A087WSX0 123 aa7.56□□□□□ -1.2
SCN4A-201ENST00000435607 MTORP42345 2549 aa7.56□□□□□ -1.2
SCN4A-201ENST00000435607 IGLV6-57P01721 117 aa7.56□□□□□ -1.2
SCN4A-201ENST00000435607 C9orf129Q5T035 196 aaKnown RBP7.56□□□□□ -1.2
SCN4A-201ENST00000435607 LAMA2P24043 3122 aaKnown RBP7.55□□□□□ -1.2
SCN4A-201ENST00000435607 LUZP6Q538Z0 58 aa7.55□□□□□ -1.2
SCN4A-201ENST00000435607 FASNP49327 2511 aaKnown RBP7.55□□□□□ -1.2
SCN4A-201ENST00000435607 LINC01554Q52M75 96 aa7.55□□□□□ -1.2
SCN4A-201ENST00000435607 CYP4F30PQ9H0H9 118 aa7.53□□□□□ -1.2
SCN4A-201ENST00000435607 DSCR10P59022 87 aa7.53□□□□□ -1.2
SCN4A-201ENST00000435607 ANKRD11Q6UB99 2663 aaPredicted RBP7.53□□□□□ -1.2
SCN4A-201ENST00000435607 FLG2Q5D862 2391 aaPredicted RBP7.53□□□□□ -1.2
SCN4A-201ENST00000435607 M0R2T5 61 aa7.53□□□□□ -1.2
SCN4A-201ENST00000435607 MIR22HGQ0VDD5 57 aa7.52□□□□□ -1.21
SCN4A-201ENST00000435607 LINC01546A6NGU7 62 aa7.51□□□□□ -1.21
SCN4A-201ENST00000435607 POLQO75417 2590 aa7.51□□□□□ -1.21
SCN4A-201ENST00000435607 SMR3BP02814 79 aaPredicted RBP7.51□□□□□ -1.21
SCN4A-201ENST00000435607 COA5Q86WW8 74 aa7.51□□□□□ -1.21
SCN4A-201ENST00000435607 USP9YO00507 2555 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms