RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 ADAMTSL4-AS1Q5T5F5 129 aa9.69□□□□□ -0.86
CNOT9-205ENST00000433439 PLAC8Q9NZF1 115 aa9.69□□□□□ -0.86
CNOT9-205ENST00000433439 COX8AP10176 69 aa9.68□□□□□ -0.86
CNOT9-205ENST00000433439 SERTAD4-AS1Q5TG53 156 aa9.68□□□□□ -0.86
CNOT9-205ENST00000433439 S100A12P80511 92 aa9.67□□□□□ -0.86
CNOT9-205ENST00000433439 MIEN1Q9BRT3 115 aa9.67□□□□□ -0.86
CNOT9-205ENST00000433439 M0QXV9 152 aa9.66□□□□□ -0.86
CNOT9-205ENST00000433439 TIMM17BO60830 172 aa9.66□□□□□ -0.86
CNOT9-205ENST00000433439 PHF5AQ7RTV0 110 aaKnown RBP9.66□□□□□ -0.86
CNOT9-205ENST00000433439 BOD1L2Q8IYS8 172 aa9.66□□□□□ -0.86
CNOT9-205ENST00000433439 LITAFQ99732 161 aa9.66□□□□□ -0.86
CNOT9-205ENST00000433439 LRP1BQ9NZR2 4599 aa9.66□□□□□ -0.86
CNOT9-205ENST00000433439 TMEM238C9JI98 176 aa9.65□□□□□ -0.86
CNOT9-205ENST00000433439 KRTAP7-1Q8IUC3 87 aa9.65□□□□□ -0.86
CNOT9-205ENST00000433439 NKAPP1Q8N9T2 125 aa9.64□□□□□ -0.87
CNOT9-205ENST00000433439 C22orf24Q9Y442 160 aa9.64□□□□□ -0.87
CNOT9-205ENST00000433439 RPL24P83731 157 aaKnown RBP9.63□□□□□ -0.87
CNOT9-205ENST00000433439 SLC25A34Q6PIV7 304 aa9.63□□□□□ -0.87
CNOT9-205ENST00000433439 GAGE10A6NGK3 116 aa9.62□□□□□ -0.87
CNOT9-205ENST00000433439 EIF4EBP3O60516 100 aaPredicted RBP9.62□□□□□ -0.87
CNOT9-205ENST00000433439 SMIM6P0DI80 62 aa9.62□□□□□ -0.87
CNOT9-205ENST00000433439 VPREB1P12018 145 aa9.62□□□□□ -0.87
CNOT9-205ENST00000433439 SRSF9Q13242 221 aaKnown RBP eCLIP9.62□□□□□ -0.87
CNOT9-205ENST00000433439 SOSTDC1Q6X4U4 206 aa9.62□□□□□ -0.87
CNOT9-205ENST00000433439 LINC00528Q8N1L1 170 aa9.62□□□□□ -0.87
CNOT9-205ENST00000433439 Q8NDZ9 215 aa9.62□□□□□ -0.87
CNOT9-205ENST00000433439 LINC00308Q8TCZ7 52 aa9.62□□□□□ -0.87
CNOT9-205ENST00000433439 C7orf33Q8WU49 177 aa9.62□□□□□ -0.87
CNOT9-205ENST00000433439 PLA2G2DQ9UNK4 145 aa9.62□□□□□ -0.87
CNOT9-205ENST00000433439 NCR3O14931 201 aa9.61□□□□□ -0.87
CNOT9-205ENST00000433439 UBE2BP63146 152 aa9.61□□□□□ -0.87
CNOT9-205ENST00000433439 PRR3P79522 188 aaKnown RBP9.61□□□□□ -0.87
CNOT9-205ENST00000433439 SPANXDQ9BXN6 97 aa9.61□□□□□ -0.87
CNOT9-205ENST00000433439 SPANXCQ9NY87 97 aa9.61□□□□□ -0.87
CNOT9-205ENST00000433439 DLEU1O43261 78 aa9.6□□□□□ -0.87
CNOT9-205ENST00000433439 MRPL55Q7Z7F7 128 aaKnown RBP9.6□□□□□ -0.87
CNOT9-205ENST00000433439 EPM2AB3EWF7 344 aa9.59□□□□□ -0.87
CNOT9-205ENST00000433439 LBHQ53QV2 105 aaPredicted RBP9.59□□□□□ -0.87
CNOT9-205ENST00000433439 IGLV5-37A0A075B6J1 123 aa9.58□□□□□ -0.88
CNOT9-205ENST00000433439 RPL37AP8A6NKH3 93 aa9.58□□□□□ -0.88
CNOT9-205ENST00000433439 MUSTN1Q8IVN3 82 aa9.58□□□□□ -0.88
CNOT9-205ENST00000433439 LINC00167Q96N53 147 aa9.58□□□□□ -0.88
CNOT9-205ENST00000433439 PRO1933Q9H354 126 aa9.58□□□□□ -0.88
CNOT9-205ENST00000433439 DNAH8Q96JB1 4490 aa9.57□□□□□ -0.88
CNOT9-205ENST00000433439 LOC107984156A0A0G2JMH3 177 aa9.57□□□□□ -0.88
CNOT9-205ENST00000433439 FAM229AH3BQW9 127 aa9.57□□□□□ -0.88
CNOT9-205ENST00000433439 Q6ZVH6 145 aa9.57□□□□□ -0.88
CNOT9-205ENST00000433439 ARL17AQ8IVW1 177 aa9.57□□□□□ -0.88
CNOT9-205ENST00000433439 HIST1H4GQ99525 98 aa9.57□□□□□ -0.88
CNOT9-205ENST00000433439 SPANXB1Q9NS25 103 aaPredicted RBP9.57□□□□□ -0.88
CNOT9-205ENST00000433439 IFITM1P13164 125 aa9.56□□□□□ -0.88
CNOT9-205ENST00000433439 RPL37AP61513 92 aaKnown RBP9.56□□□□□ -0.88
CNOT9-205ENST00000433439 COPS9Q8WXC6 57 aa9.56□□□□□ -0.88
CNOT9-205ENST00000433439 APOBP04114 4563 aaKnown RBP9.56□□□□□ -0.88
CNOT9-205ENST00000433439 IGKV2-28A0A075B6P5 120 aa9.55□□□□□ -0.88
CNOT9-205ENST00000433439 M0R378 163 aa9.55□□□□□ -0.88
CNOT9-205ENST00000433439 IGKV2D-28P01615 120 aa9.55□□□□□ -0.88
CNOT9-205ENST00000433439 Q5VSD8 79 aa9.55□□□□□ -0.88
CNOT9-205ENST00000433439 C2orf91Q6ZV80 131 aa9.55□□□□□ -0.88
CNOT9-205ENST00000433439 KRTAP11-1Q8IUC1 163 aa9.55□□□□□ -0.88
CNOT9-205ENST00000433439 C12orf57Q99622 126 aa9.55□□□□□ -0.88
CNOT9-205ENST00000433439 UQCR10Q9UDW1 63 aa9.55□□□□□ -0.88
CNOT9-205ENST00000433439 Q8N1X5 172 aa9.54□□□□□ -0.88
CNOT9-205ENST00000433439 NDUFC2O95298 119 aa9.53□□□□□ -0.88
CNOT9-205ENST00000433439 HIGD1BQ9P298 99 aa9.53□□□□□ -0.88
CNOT9-205ENST00000433439 PLA2G1BP04054 148 aaKnown RBP9.52□□□□□ -0.89
CNOT9-205ENST00000433439 S100A7L2Q5SY68 101 aa9.52□□□□□ -0.89
CNOT9-205ENST00000433439 OR13C6PQ8NH95 151 aa9.52□□□□□ -0.89
CNOT9-205ENST00000433439 PSORS1C2Q9UIG4 136 aa9.52□□□□□ -0.89
CNOT9-205ENST00000433439 C1orf137Q5JT78 98 aa9.51□□□□□ -0.89
CNOT9-205ENST00000433439 IGLV1-50A0A075B6I6 118 aa9.5□□□□□ -0.89
CNOT9-205ENST00000433439 TRBV10-3A0A0K0K1G6 114 aa9.5□□□□□ -0.89
CNOT9-205ENST00000433439 TRBV10-2A0A0K0K1G8 114 aa9.5□□□□□ -0.89
CNOT9-205ENST00000433439 DDTP30046 118 aa9.5□□□□□ -0.89
CNOT9-205ENST00000433439 HNRNPA3P51991 378 aaKnown RBP9.5□□□□□ -0.89
CNOT9-205ENST00000433439 HERC1Q15751 4861 aa9.5□□□□□ -0.89
CNOT9-205ENST00000433439 A4D1N5 150 aa9.49□□□□□ -0.89
CNOT9-205ENST00000433439 HSPG2P98160 4391 aa9.48□□□□□ -0.89
CNOT9-205ENST00000433439 LINC00518Q8N0U6 118 aa9.48□□□□□ -0.89
CNOT9-205ENST00000433439 UBR4Q5T4S7 5183 aa9.47□□□□□ -0.89
CNOT9-205ENST00000433439 A6NDN8 102 aa9.47□□□□□ -0.89
CNOT9-205ENST00000433439 PPDPFQ9H3Y8 114 aa9.47□□□□□ -0.89
CNOT9-205ENST00000433439 TSTD3H0UI37 97 aa9.46□□□□□ -0.9
CNOT9-205ENST00000433439 TAL2Q16559 108 aa9.46□□□□□ -0.9
CNOT9-205ENST00000433439 REG3GQ6UW15 175 aa9.46□□□□□ -0.9
CNOT9-205ENST00000433439 CEND1Q8N111 149 aa9.46□□□□□ -0.9
CNOT9-205ENST00000433439 LINC00337Q8N6G1 96 aa9.46□□□□□ -0.9
CNOT9-205ENST00000433439 HSD52Q0P140 79 aa9.45□□□□□ -0.9
CNOT9-205ENST00000433439 TMEM126AQ9H061 195 aa9.45□□□□□ -0.9
CNOT9-205ENST00000433439 PRYO14603 147 aa9.44□□□□□ -0.9
CNOT9-205ENST00000433439 BCE1O60756 84 aa9.43□□□□□ -0.9
CNOT9-205ENST00000433439 IGLV6-57P01721 117 aa9.43□□□□□ -0.9
CNOT9-205ENST00000433439 KRTAP10-4P60372 401 aaPredicted RBP9.43□□□□□ -0.9
CNOT9-205ENST00000433439 FAM19A1Q7Z5A9 133 aa9.43□□□□□ -0.9
CNOT9-205ENST00000433439 TRAV23DV6A0A075B6W5 121 aa9.42□□□□□ -0.9
CNOT9-205ENST00000433439 TRAV13-2A0A0B4J235 113 aa9.42□□□□□ -0.9
CNOT9-205ENST00000433439 IGLV7-43P04211 117 aa9.42□□□□□ -0.9
CNOT9-205ENST00000433439 UBE2AP49459 152 aa9.42□□□□□ -0.9
CNOT9-205ENST00000433439 FXYD2P54710 66 aa9.42□□□□□ -0.9
CNOT9-205ENST00000433439 KCNQ1DNQ9H478 68 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms