RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 CEND1Q8N111 149 aa16.97■□□□□ 0.31
TMEM248-205ENST00000433271 DNAH11Q96DT5 4516 aa16.97■□□□□ 0.31
TMEM248-205ENST00000433271 HECTD4Q9Y4D8 3996 aa16.97■□□□□ 0.31
TMEM248-205ENST00000433271 PKD1P98161 4303 aa16.95■□□□□ 0.3
TMEM248-205ENST00000433271 A0A096LNI7 61 aa16.95■□□□□ 0.3
TMEM248-205ENST00000433271 A0A1B0GVY2 172 aa16.95■□□□□ 0.3
TMEM248-205ENST00000433271 C9orf129Q5T035 196 aaKnown RBP16.94■□□□□ 0.3
TMEM248-205ENST00000433271 RPL24P83731 157 aaKnown RBP16.93■□□□□ 0.3
TMEM248-205ENST00000433271 RYR3Q15413 4870 aa16.93■□□□□ 0.3
TMEM248-205ENST00000433271 IGKV2-24A0A0C4DH68 120 aa16.91■□□□□ 0.3
TMEM248-205ENST00000433271 LINC00474Q9P2X8 69 aa16.91■□□□□ 0.3
TMEM248-205ENST00000433271 A4D1N5 150 aa16.88■□□□□ 0.29
TMEM248-205ENST00000433271 M0R143 59 aa16.88■□□□□ 0.29
TMEM248-205ENST00000433271 HINT1P49773 126 aaPredicted RBP16.88■□□□□ 0.29
TMEM248-205ENST00000433271 FXYD2P54710 66 aa16.88■□□□□ 0.29
TMEM248-205ENST00000433271 CHTF8P0CG12 524 aa16.88■□□□□ 0.29
TMEM248-205ENST00000433271 BVES-AS1Q5T3Y7 98 aa16.88■□□□□ 0.29
TMEM248-205ENST00000433271 TMEM238LA0A1B0GVL6 79 aa16.86■□□□□ 0.29
TMEM248-205ENST00000433271 A6NJY4 79 aa16.86■□□□□ 0.29
TMEM248-205ENST00000433271 NDUFC2O95298 119 aa16.86■□□□□ 0.29
TMEM248-205ENST00000433271 PLA2G2DQ9UNK4 145 aa16.86■□□□□ 0.29
TMEM248-205ENST00000433271 Q8NDZ9 215 aa16.85■□□□□ 0.29
TMEM248-205ENST00000433271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.84■□□□□ 0.29
TMEM248-205ENST00000433271 PANO1I0J062 215 aa16.83■□□□□ 0.28
TMEM248-205ENST00000433271 SPACA4Q8TDM5 124 aa16.83■□□□□ 0.28
TMEM248-205ENST00000433271 VPREB1P12018 145 aa16.82■□□□□ 0.28
TMEM248-205ENST00000433271 FAM168BA1KXE4 195 aa16.81■□□□□ 0.28
TMEM248-205ENST00000433271 KRTAP10-1P60331 282 aa16.81■□□□□ 0.28
TMEM248-205ENST00000433271 PRR3P79522 188 aaKnown RBP16.81■□□□□ 0.28
TMEM248-205ENST00000433271 SERTAD4-AS1Q5TG53 156 aa16.81■□□□□ 0.28
TMEM248-205ENST00000433271 DPH3Q96FX2 82 aa16.8■□□□□ 0.28
TMEM248-205ENST00000433271 A0A1W2PNN7 141 aa16.79■□□□□ 0.28
TMEM248-205ENST00000433271 DNAH5Q8TE73 4624 aa16.78■□□□□ 0.28
TMEM248-205ENST00000433271 IGKV2-28A0A075B6P5 120 aa16.78■□□□□ 0.28
TMEM248-205ENST00000433271 IGKV2D-28P01615 120 aa16.78■□□□□ 0.28
TMEM248-205ENST00000433271 CFC1BP0CG36 223 aa16.78■□□□□ 0.28
TMEM248-205ENST00000433271 CFC1P0CG37 223 aa16.78■□□□□ 0.28
TMEM248-205ENST00000433271 KRTAP7-1Q8IUC3 87 aa16.78■□□□□ 0.28
TMEM248-205ENST00000433271 IGLV5-37A0A075B6J1 123 aa16.77■□□□□ 0.27
TMEM248-205ENST00000433271 BATFQ16520 125 aa16.77■□□□□ 0.27
TMEM248-205ENST00000433271 FAM19A5Q7Z5A7 132 aaPredicted RBP16.77■□□□□ 0.27
TMEM248-205ENST00000433271 NHP2Q9NX24 153 aaKnown RBP16.77■□□□□ 0.27
TMEM248-205ENST00000433271 TRBV10-2A0A0K0K1G8 114 aa16.76■□□□□ 0.27
TMEM248-205ENST00000433271 NCR3O14931 201 aa16.75■□□□□ 0.27
TMEM248-205ENST00000433271 NKAPP1Q8N9T2 125 aa16.75■□□□□ 0.27
TMEM248-205ENST00000433271 A0A0B4J2C4 111 aa16.74■□□□□ 0.27
TMEM248-205ENST00000433271 Q6ZSA8 131 aa16.74■□□□□ 0.27
TMEM248-205ENST00000433271 SNHG12Q9BXW3 62 aa16.74■□□□□ 0.27
TMEM248-205ENST00000433271 A0A1B0GWB2 263 aa16.74■□□□□ 0.27
TMEM248-205ENST00000433271 A6NDN8 102 aa16.74■□□□□ 0.27
TMEM248-205ENST00000433271 M0R378 163 aa16.73■□□□□ 0.27
TMEM248-205ENST00000433271 LINC00337Q8N6G1 96 aa16.73■□□□□ 0.27
TMEM248-205ENST00000433271 FAM30AQ9NZY2 134 aa16.73■□□□□ 0.27
TMEM248-205ENST00000433271 C22orf24Q9Y442 160 aa16.73■□□□□ 0.27
TMEM248-205ENST00000433271 PKHD1P08F94 4074 aa16.72■□□□□ 0.27
TMEM248-205ENST00000433271 A0A087WYN8 130 aa16.72■□□□□ 0.27
TMEM248-205ENST00000433271 TRAV13-2A0A0B4J235 113 aa16.72■□□□□ 0.27
TMEM248-205ENST00000433271 EPM2AB3EWF7 344 aa16.72■□□□□ 0.27
TMEM248-205ENST00000433271 RAB37Q96AX2 223 aa16.72■□□□□ 0.27
TMEM248-205ENST00000433271 PLAC8Q9NZF1 115 aa16.7■□□□□ 0.26
TMEM248-205ENST00000433271 K7ERJ3 54 aa16.69■□□□□ 0.26
TMEM248-205ENST00000433271 M0QXV9 152 aa16.69■□□□□ 0.26
TMEM248-205ENST00000433271 MRPL55Q7Z7F7 128 aaKnown RBP16.69■□□□□ 0.26
TMEM248-205ENST00000433271 PRO1854Q9UHT4 67 aa16.69■□□□□ 0.26
TMEM248-205ENST00000433271 OR13C6PQ8NH95 151 aa16.67■□□□□ 0.26
TMEM248-205ENST00000433271 C7orf33Q8WU49 177 aa16.67■□□□□ 0.26
TMEM248-205ENST00000433271 S100A7L2Q5SY68 101 aa16.67■□□□□ 0.26
TMEM248-205ENST00000433271 TMEM126AQ9H061 195 aa16.66■□□□□ 0.26
TMEM248-205ENST00000433271 IGLV6-57P01721 117 aa16.65■□□□□ 0.26
TMEM248-205ENST00000433271 LBHQ53QV2 105 aaPredicted RBP16.65■□□□□ 0.26
TMEM248-205ENST00000433271 GAGE10A6NGK3 116 aa16.64■□□□□ 0.25
TMEM248-205ENST00000433271 LINC00167Q96N53 147 aa16.64■□□□□ 0.25
TMEM248-205ENST00000433271 TRBV10-3A0A0K0K1G6 114 aa16.63■□□□□ 0.25
TMEM248-205ENST00000433271 RPL13AP40429 203 aaKnown RBP16.63■□□□□ 0.25
TMEM248-205ENST00000433271 CIRBP-AS1Q8TBR5 109 aa16.63■□□□□ 0.25
TMEM248-205ENST00000433271 SCXQ7RTU7 201 aa16.61■□□□□ 0.25
TMEM248-205ENST00000433271 PHF5AQ7RTV0 110 aaKnown RBP16.61■□□□□ 0.25
TMEM248-205ENST00000433271 DNAH8Q96JB1 4490 aa16.61■□□□□ 0.25
TMEM248-205ENST00000433271 IGLV1-50A0A075B6I6 118 aa16.59■□□□□ 0.25
TMEM248-205ENST00000433271 RPL37AP8A6NKH3 93 aa16.59■□□□□ 0.25
TMEM248-205ENST00000433271 H7C2G1 150 aa16.59■□□□□ 0.25
TMEM248-205ENST00000433271 COL5A1-AS1Q5SY13 56 aa16.59■□□□□ 0.25
TMEM248-205ENST00000433271 LRP1BQ9NZR2 4599 aa16.57■□□□□ 0.24
TMEM248-205ENST00000433271 CBY1Q9Y3M2 126 aa16.56■□□□□ 0.24
TMEM248-205ENST00000433271 DYNC1H1Q14204 4646 aaKnown RBP16.55■□□□□ 0.24
TMEM248-205ENST00000433271 KCNQ1DNQ9H478 68 aa16.55■□□□□ 0.24
TMEM248-205ENST00000433271 Q1RN00 199 aa16.54■□□□□ 0.24
TMEM248-205ENST00000433271 SMIM11BQ8TCY0 68 aa16.54■□□□□ 0.24
TMEM248-205ENST00000433271 TRAV23DV6A0A075B6W5 121 aa16.53■□□□□ 0.24
TMEM248-205ENST00000433271 TSPAN13O95857 204 aa16.53■□□□□ 0.24
TMEM248-205ENST00000433271 UBE2BP63146 152 aa16.53■□□□□ 0.24
TMEM248-205ENST00000433271 HAMPP81172 84 aa16.52■□□□□ 0.24
TMEM248-205ENST00000433271 TAX1BP3O14907 124 aa16.52■□□□□ 0.23
TMEM248-205ENST00000433271 RPL28P46779 137 aaKnown RBP16.5■□□□□ 0.23
TMEM248-205ENST00000433271 PRYO14603 147 aa16.49■□□□□ 0.23
TMEM248-205ENST00000433271 XGP55808 180 aa16.49■□□□□ 0.23
TMEM248-205ENST00000433271 KRTAP11-1Q8IUC1 163 aa16.49■□□□□ 0.23
TMEM248-205ENST00000433271 ZNF73O43830 326 aaPredicted RBP16.48■□□□□ 0.23
TMEM248-205ENST00000433271 C9orf118A6NHY6 69 aa16.45■□□□□ 0.22
TMEM248-205ENST00000433271 C6orf99Q4VX62 202 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms