RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 A0A087WTM6 91 aa11.84□□□□□ -0.51
HMGN1-206ENST00000431390 LBHQ53QV2 105 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-206ENST00000431390 SND1-IT1Q9HBX3 110 aa11.84□□□□□ -0.51
HMGN1-206ENST00000431390 NHP2Q9NX24 153 aaKnown RBP11.84□□□□□ -0.51
HMGN1-206ENST00000431390 A0A1B0GWB2 263 aa11.83□□□□□ -0.52
HMGN1-206ENST00000431390 COL5A1-AS1Q5SY13 56 aa11.83□□□□□ -0.52
HMGN1-206ENST00000431390 Q8N814 137 aa11.83□□□□□ -0.52
HMGN1-206ENST00000431390 ABCA13Q86UQ4 5058 aa11.82□□□□□ -0.52
HMGN1-206ENST00000431390 DYNC1H1Q14204 4646 aaKnown RBP11.82□□□□□ -0.52
HMGN1-206ENST00000431390 DNAH17Q9UFH2 4485 aa11.81□□□□□ -0.52
HMGN1-206ENST00000431390 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-206ENST00000431390 A0A0B4J2C4 111 aa11.79□□□□□ -0.52
HMGN1-206ENST00000431390 CFC1BP0CG36 223 aa11.79□□□□□ -0.52
HMGN1-206ENST00000431390 CFC1P0CG37 223 aa11.79□□□□□ -0.52
HMGN1-206ENST00000431390 Q6ZRP5 223 aa11.79□□□□□ -0.52
HMGN1-206ENST00000431390 LOC107984640A0A0U1RRK4 108 aa11.78□□□□□ -0.52
HMGN1-206ENST00000431390 RTL8CO15255 209 aa11.78□□□□□ -0.52
HMGN1-206ENST00000431390 NDUFC2O95298 119 aa11.77□□□□□ -0.53
HMGN1-206ENST00000431390 DNAH11Q96DT5 4516 aa11.77□□□□□ -0.53
HMGN1-206ENST00000431390 K7ERJ3 54 aa11.76□□□□□ -0.53
HMGN1-206ENST00000431390 RPL18AQ02543 176 aaKnown RBP11.76□□□□□ -0.53
HMGN1-206ENST00000431390 C9orf163Q8N9P6 203 aa11.76□□□□□ -0.53
HMGN1-206ENST00000431390 KRTAP4-5Q9BYR2 181 aa11.76□□□□□ -0.53
HMGN1-206ENST00000431390 PKIGQ9Y2B9 76 aa11.76□□□□□ -0.53
HMGN1-206ENST00000431390 GAGE2EQ4V326 116 aa11.75□□□□□ -0.53
HMGN1-206ENST00000431390 RAB37Q96AX2 223 aa11.75□□□□□ -0.53
HMGN1-206ENST00000431390 XAGE1AQ9HD64 81 aa11.75□□□□□ -0.53
HMGN1-206ENST00000431390 GAGE2DQ9UEU5 116 aa11.75□□□□□ -0.53
HMGN1-206ENST00000431390 PKD1P98161 4303 aa11.75□□□□□ -0.53
HMGN1-206ENST00000431390 TNP2Q05952 138 aa11.75□□□□□ -0.53
HMGN1-206ENST00000431390 TAX1BP3O14907 124 aa11.74□□□□□ -0.53
HMGN1-206ENST00000431390 PRO1854Q9UHT4 67 aa11.74□□□□□ -0.53
HMGN1-206ENST00000431390 IGKV2-28A0A075B6P5 120 aa11.72□□□□□ -0.53
HMGN1-206ENST00000431390 IGKV2D-28P01615 120 aa11.72□□□□□ -0.53
HMGN1-206ENST00000431390 C9orf129Q5T035 196 aaKnown RBP11.71□□□□□ -0.53
HMGN1-206ENST00000431390 TRAV13-2A0A0B4J235 113 aa11.71□□□□□ -0.54
HMGN1-206ENST00000431390 C16orf90A8MZG2 172 aa11.71□□□□□ -0.54
HMGN1-206ENST00000431390 GAGE2BQ13066 116 aa11.71□□□□□ -0.54
HMGN1-206ENST00000431390 Q8NDZ9 215 aa11.7□□□□□ -0.54
HMGN1-206ENST00000431390 PLA2G2DQ9UNK4 145 aa11.7□□□□□ -0.54
HMGN1-206ENST00000431390 LINC00337Q8N6G1 96 aa11.69□□□□□ -0.54
HMGN1-206ENST00000431390 TRBV10-2A0A0K0K1G8 114 aa11.68□□□□□ -0.54
HMGN1-206ENST00000431390 VPREB1P12018 145 aa11.68□□□□□ -0.54
HMGN1-206ENST00000431390 PGPEP1Q9NXJ5 209 aa11.68□□□□□ -0.54
HMGN1-206ENST00000431390 A0A096LNI7 61 aa11.67□□□□□ -0.54
HMGN1-206ENST00000431390 C9orf118A6NHY6 69 aa11.67□□□□□ -0.54
HMGN1-206ENST00000431390 SDIM1Q6ZPB5 146 aa11.67□□□□□ -0.54
HMGN1-206ENST00000431390 RPL13AP40429 203 aaKnown RBP11.67□□□□□ -0.54
HMGN1-206ENST00000431390 HSPG2P98160 4391 aa11.66□□□□□ -0.54
HMGN1-206ENST00000431390 IGLV5-52A0A0A0MRZ9 124 aa11.66□□□□□ -0.54
HMGN1-206ENST00000431390 NCR3O14931 201 aa11.66□□□□□ -0.54
HMGN1-206ENST00000431390 TSPAN13O95857 204 aa11.66□□□□□ -0.54
HMGN1-206ENST00000431390 PRR3P79522 188 aaKnown RBP11.66□□□□□ -0.54
HMGN1-206ENST00000431390 LINC00474Q9P2X8 69 aa11.64□□□□□ -0.55
HMGN1-206ENST00000431390 IGLV5-37A0A075B6J1 123 aa11.63□□□□□ -0.55
HMGN1-206ENST00000431390 IGKV2-24A0A0C4DH68 120 aa11.63□□□□□ -0.55
HMGN1-206ENST00000431390 H3BUT2 72 aa11.63□□□□□ -0.55
HMGN1-206ENST00000431390 Q1RN00 199 aa11.63□□□□□ -0.55
HMGN1-206ENST00000431390 LINC01620Q4KN68 170 aa11.63□□□□□ -0.55
HMGN1-206ENST00000431390 H7C2G1 150 aa11.62□□□□□ -0.55
HMGN1-206ENST00000431390 M0R378 163 aa11.62□□□□□ -0.55
HMGN1-206ENST00000431390 SERTAD4-AS1Q5TG53 156 aa11.62□□□□□ -0.55
HMGN1-206ENST00000431390 OR13C6PQ8NH95 151 aa11.62□□□□□ -0.55
HMGN1-206ENST00000431390 TMEM126AQ9H061 195 aa11.62□□□□□ -0.55
HMGN1-206ENST00000431390 NKAPP1Q8N9T2 125 aa11.62□□□□□ -0.55
HMGN1-206ENST00000431390 S100A7L2Q5SY68 101 aa11.61□□□□□ -0.55
HMGN1-206ENST00000431390 NAA38Q9BRA0 125 aaKnown RBP11.61□□□□□ -0.55
HMGN1-206ENST00000431390 FAM168BA1KXE4 195 aa11.6□□□□□ -0.55
HMGN1-206ENST00000431390 IGLV6-57P01721 117 aa11.59□□□□□ -0.55
HMGN1-206ENST00000431390 FUSP35637 526 aaKnown RBP eCLIP11.59□□□□□ -0.55
HMGN1-206ENST00000431390 KRTAP10-2P60368 255 aa11.59□□□□□ -0.55
HMGN1-206ENST00000431390 A0A1W2PPM0 123 aa11.58□□□□□ -0.55
HMGN1-206ENST00000431390 CHTF8P0CG12 524 aa11.58□□□□□ -0.55
HMGN1-206ENST00000431390 KRTAP7-1Q8IUC3 87 aa11.58□□□□□ -0.55
HMGN1-206ENST00000431390 PSMB2P49721 201 aa11.58□□□□□ -0.56
HMGN1-206ENST00000431390 RPL28P46779 137 aaKnown RBP11.57□□□□□ -0.56
HMGN1-206ENST00000431390 FAM19A5Q7Z5A7 132 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-206ENST00000431390 SPACA4Q8TDM5 124 aa11.57□□□□□ -0.56
HMGN1-206ENST00000431390 TRBV10-3A0A0K0K1G6 114 aa11.56□□□□□ -0.56
HMGN1-206ENST00000431390 A0A1B0GV90 55 aa11.56□□□□□ -0.56
HMGN1-206ENST00000431390 A0A1W2PNN7 141 aa11.56□□□□□ -0.56
HMGN1-206ENST00000431390 FABP2P12104 132 aa11.56□□□□□ -0.56
HMGN1-206ENST00000431390 LYRM7Q5U5X0 104 aa11.56□□□□□ -0.56
HMGN1-206ENST00000431390 SMIM11BQ8TCY0 68 aa11.56□□□□□ -0.56
HMGN1-206ENST00000431390 C22orf24Q9Y442 160 aa11.56□□□□□ -0.56
HMGN1-206ENST00000431390 TRIAP1O43715 76 aa11.55□□□□□ -0.56
HMGN1-206ENST00000431390 C7orf33Q8WU49 177 aa11.55□□□□□ -0.56
HMGN1-206ENST00000431390 CBY1Q9Y3M2 126 aa11.55□□□□□ -0.56
HMGN1-206ENST00000431390 COX6CP09669 75 aa11.54□□□□□ -0.56
HMGN1-206ENST00000431390 MRPL55Q7Z7F7 128 aaKnown RBP11.54□□□□□ -0.56
HMGN1-206ENST00000431390 PANO1I0J062 215 aa11.54□□□□□ -0.56
HMGN1-206ENST00000431390 CDK2AP2O75956 126 aa11.54□□□□□ -0.56
HMGN1-206ENST00000431390 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-206ENST00000431390 M0QXV9 152 aa11.53□□□□□ -0.56
HMGN1-206ENST00000431390 LRP1BQ9NZR2 4599 aa11.52□□□□□ -0.56
HMGN1-206ENST00000431390 SCGB1C2P0DMR2 95 aa11.52□□□□□ -0.57
HMGN1-206ENST00000431390 TRAV23DV6A0A075B6W5 121 aa11.51□□□□□ -0.57
HMGN1-206ENST00000431390 EPM2AB3EWF7 344 aa11.51□□□□□ -0.57
HMGN1-206ENST00000431390 VAMP3Q15836 100 aa11.51□□□□□ -0.57
HMGN1-206ENST00000431390 LINC00167Q96N53 147 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms