RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 PPP1R2P9O14990 202 aa1.96□□□□□ -2.1
PTPN4-204ENST00000431283 TCAPO15273 167 aa1.96□□□□□ -2.1
PTPN4-204ENST00000431283 GATCO43716 136 aaKnown RBP1.96□□□□□ -2.1
PTPN4-204ENST00000431283 CRYGAP11844 174 aa1.96□□□□□ -2.1
PTPN4-204ENST00000431283 ORAOV1Q8WV07 137 aa1.96□□□□□ -2.1
PTPN4-204ENST00000431283 TGIF2-C20orf24A0A0A6YYL0 155 aa1.95□□□□□ -2.1
PTPN4-204ENST00000431283 TRBV30A0A0K0K1B3 111 aa1.95□□□□□ -2.1
PTPN4-204ENST00000431283 SMLR1H3BR10 107 aa1.95□□□□□ -2.1
PTPN4-204ENST00000431283 NUPR1O60356 82 aa1.95□□□□□ -2.1
PTPN4-204ENST00000431283 RAB4AP20338 218 aa1.95□□□□□ -2.1
PTPN4-204ENST00000431283 RPL28P46779 137 aaKnown RBP1.95□□□□□ -2.1
PTPN4-204ENST00000431283 POLR2KP53803 58 aaKnown RBP1.95□□□□□ -2.1
PTPN4-204ENST00000431283 HBBP68871 147 aa1.95□□□□□ -2.1
PTPN4-204ENST00000431283 RGS21Q2M5E4 152 aa1.95□□□□□ -2.1
PTPN4-204ENST00000431283 RNASE13Q5GAN3 156 aaKnown RBP1.95□□□□□ -2.1
PTPN4-204ENST00000431283 UNQ6190/PRO20217Q6UXQ8 127 aa1.95□□□□□ -2.1
PTPN4-204ENST00000431283 FAM231DQ6ZW35 169 aa1.95□□□□□ -2.1
PTPN4-204ENST00000431283 PACRGQ96M98 296 aaPredicted RBP1.95□□□□□ -2.1
PTPN4-204ENST00000431283 TIMM21Q9BVV7 248 aa1.95□□□□□ -2.1
PTPN4-204ENST00000431283 TMEM191AQ9H0A3 160 aa1.95□□□□□ -2.1
PTPN4-204ENST00000431283 SMDT1Q9H4I9 107 aa1.95□□□□□ -2.1
PTPN4-204ENST00000431283 UBE2D4Q9Y2X8 147 aa1.95□□□□□ -2.1
PTPN4-204ENST00000431283 IGHV3OR16-9A0A0B4J2B5 98 aa1.94□□□□□ -2.1
PTPN4-204ENST00000431283 HIGD1CA8MV81 97 aa1.94□□□□□ -2.1
PTPN4-204ENST00000431283 NDUFC2-KCTD14E9PQ53 114 aa1.94□□□□□ -2.1
PTPN4-204ENST00000431283 TMEM250H0YL14 139 aa1.94□□□□□ -2.1
PTPN4-204ENST00000431283 K7EN84 100 aa1.94□□□□□ -2.1
PTPN4-204ENST00000431283 RAB5AP20339 215 aa1.94□□□□□ -2.1
PTPN4-204ENST00000431283 CEBPGP53567 150 aa1.94□□□□□ -2.1
PTPN4-204ENST00000431283 CKS1BP61024 79 aa1.94□□□□□ -2.1
PTPN4-204ENST00000431283 Q6ZUT4 128 aa1.94□□□□□ -2.1
PTPN4-204ENST00000431283 AMN1Q8IY45 258 aa1.94□□□□□ -2.1
PTPN4-204ENST00000431283 C20orf78Q9BR46 151 aa1.94□□□□□ -2.1
PTPN4-204ENST00000431283 BATF3Q9NR55 127 aa1.94□□□□□ -2.1
PTPN4-204ENST00000431283 SPANXA1Q9NS26 97 aa1.94□□□□□ -2.1
PTPN4-204ENST00000431283 C6orf48Q9UBA6 75 aa1.94□□□□□ -2.1
PTPN4-204ENST00000431283 A0A1B0GW15 77 aa1.93□□□□□ -2.1
PTPN4-204ENST00000431283 LINC00862A6NCI5 91 aa1.93□□□□□ -2.1
PTPN4-204ENST00000431283 ZNF727A8MUV8 499 aa1.93□□□□□ -2.1
PTPN4-204ENST00000431283 SMKR1H3BMG3 65 aa1.93□□□□□ -2.1
PTPN4-204ENST00000431283 BCE1O60756 84 aa1.93□□□□□ -2.1
PTPN4-204ENST00000431283 CKS2P33552 79 aa1.93□□□□□ -2.1
PTPN4-204ENST00000431283 IFI27P40305 119 aaPredicted RBP1.93□□□□□ -2.1
PTPN4-204ENST00000431283 MRPS36P82909 103 aaKnown RBP1.93□□□□□ -2.1
PTPN4-204ENST00000431283 C6orf226Q5I0X4 101 aa1.93□□□□□ -2.1
PTPN4-204ENST00000431283 SLC51BQ86UW2 128 aa1.93□□□□□ -2.1
PTPN4-204ENST00000431283 C2orf88Q9BSF0 95 aa1.93□□□□□ -2.1
PTPN4-204ENST00000431283 KRTAP4-1Q9BYQ7 146 aa1.93□□□□□ -2.1
PTPN4-204ENST00000431283 NAT8BQ9UHF3 227 aa1.93□□□□□ -2.1
PTPN4-204ENST00000431283 C22orf24Q9Y442 160 aa1.93□□□□□ -2.1
PTPN4-204ENST00000431283 TRBV24-1A0A075B6N3 115 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 IGKV2D-26A0A0A0MRZ7 120 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 F8W036 122 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 S100A8P05109 93 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 RPL39P62891 51 aaKnown RBP1.92□□□□□ -2.1
PTPN4-204ENST00000431283 CTAG1AP78358 180 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 FAM104BQ5XKR9 115 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 C2orf82Q6UX34 121 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 TEX43Q6ZNM6 134 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 LINC00173Q6ZV60 143 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 ERASQ7Z444 233 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 MRPL55Q7Z7F7 128 aaKnown RBP1.92□□□□□ -2.1
PTPN4-204ENST00000431283 LINC00337Q8N6G1 96 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 LINC00469Q8N7U9 141 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 SMIM7Q9BQ49 75 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 EIF5A2Q9GZV4 153 aaKnown RBP1.92□□□□□ -2.1
PTPN4-204ENST00000431283 VCX2Q9H322 139 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 OSTCQ9NRP0 149 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 TOMM7Q9P0U1 55 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 TP73-AS1Q9UF72 201 aa1.92□□□□□ -2.1
PTPN4-204ENST00000431283 D6R8Y8 96 aa1.91□□□□□ -2.1
PTPN4-204ENST00000431283 PPBPP02775 128 aa1.91□□□□□ -2.1
PTPN4-204ENST00000431283 SEC11AP67812 179 aa1.91□□□□□ -2.1
PTPN4-204ENST00000431283 TPRXLQ17RH7 258 aa1.91□□□□□ -2.1
PTPN4-204ENST00000431283 FAM229BQ4G0N7 80 aa1.91□□□□□ -2.1
PTPN4-204ENST00000431283 MRPL51Q4U2R6 128 aaKnown RBP1.91□□□□□ -2.1
PTPN4-204ENST00000431283 Q8IZM0 81 aa1.91□□□□□ -2.1
PTPN4-204ENST00000431283 ZCCHC13Q8WW36 166 aaKnown RBP1.91□□□□□ -2.1
PTPN4-204ENST00000431283 TMEM141Q96I45 108 aa1.91□□□□□ -2.1
PTPN4-204ENST00000431283 RETNLBQ9BQ08 111 aa1.91□□□□□ -2.1
PTPN4-204ENST00000431283 SMIM2Q9BVW6 85 aa1.91□□□□□ -2.1
PTPN4-204ENST00000431283 XAGE1AQ9HD64 81 aa1.91□□□□□ -2.1
PTPN4-204ENST00000431283 A0A1B0GVG6 124 aa1.9□□□□□ -2.11
PTPN4-204ENST00000431283 F8VRH5 84 aa1.9□□□□□ -2.11
PTPN4-204ENST00000431283 G0S2P27469 103 aa1.9□□□□□ -2.11
PTPN4-204ENST00000431283 HERVK_113P63121 156 aa1.9□□□□□ -2.11
PTPN4-204ENST00000431283 SPAG11AQ6PDA7 123 aa1.9□□□□□ -2.11
PTPN4-204ENST00000431283 TMEM136Q6ZRR5 245 aa1.9□□□□□ -2.11
PTPN4-204ENST00000431283 ORMDL3Q8N138 153 aa1.9□□□□□ -2.11
PTPN4-204ENST00000431283 GEMIN7Q9H840 131 aaKnown RBP1.9□□□□□ -2.11
PTPN4-204ENST00000431283 CYSLTR1Q9Y271 337 aa1.9□□□□□ -2.11
PTPN4-204ENST00000431283 V9GYV3 84 aa1.9□□□□□ -2.11
PTPN4-204ENST00000431283 SMIM27A0A1W2PRY6 76 aa1.89□□□□□ -2.11
PTPN4-204ENST00000431283 NPYP01303 97 aa1.89□□□□□ -2.11
PTPN4-204ENST00000431283 ADIRFQ15847 76 aa1.89□□□□□ -2.11
PTPN4-204ENST00000431283 ORMDL2Q53FV1 153 aa1.89□□□□□ -2.11
PTPN4-204ENST00000431283 MRPL54Q6P161 138 aaKnown RBP1.89□□□□□ -2.11
PTPN4-204ENST00000431283 ALKAL2Q6UX46 152 aa1.89□□□□□ -2.11
PTPN4-204ENST00000431283 FP248Q71RG6 208 aaPredicted RBP1.89□□□□□ -2.11
PTPN4-204ENST00000431283 FAM19A1Q7Z5A9 133 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms