RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 A0A1W2PNM2 257 aa3.58□□□□□ -1.84
PTPN4-203ENST00000430976 MUC6Q6W4X9 2439 aa3.57□□□□□ -1.84
PTPN4-203ENST00000430976 TLX1NBP0CAT3 122 aa3.57□□□□□ -1.84
PTPN4-203ENST00000430976 PDE6GP18545 87 aa3.57□□□□□ -1.84
PTPN4-203ENST00000430976 TLN1Q9Y490 2541 aaKnown RBP3.57□□□□□ -1.84
PTPN4-203ENST00000430976 RAI1Q7Z5J4 1906 aaPredicted RBP3.57□□□□□ -1.84
PTPN4-203ENST00000430976 IGLV1-47P01700 117 aa3.57□□□□□ -1.84
PTPN4-203ENST00000430976 IGHV3-53P01767 116 aa3.57□□□□□ -1.84
PTPN4-203ENST00000430976 SLURP1P55000 103 aa3.57□□□□□ -1.84
PTPN4-203ENST00000430976 CRIPTQ9P021 101 aa3.57□□□□□ -1.84
PTPN4-203ENST00000430976 LENEPQ9Y5L5 61 aa3.57□□□□□ -1.84
PTPN4-203ENST00000430976 IGKV2-29A2NJV5 120 aaPredicted RBP3.57□□□□□ -1.84
PTPN4-203ENST00000430976 DEFB116Q30KQ4 102 aa3.57□□□□□ -1.84
PTPN4-203ENST00000430976 C9orf47Q6ZRZ4 202 aa3.57□□□□□ -1.84
PTPN4-203ENST00000430976 COX14Q96I36 57 aa3.57□□□□□ -1.84
PTPN4-203ENST00000430976 FRYQ5TBA9 3013 aa3.57□□□□□ -1.84
PTPN4-203ENST00000430976 DCHS1Q96JQ0 3298 aa3.56□□□□□ -1.84
PTPN4-203ENST00000430976 LY6G6DO95868 133 aa3.56□□□□□ -1.84
PTPN4-203ENST00000430976 WFDC13Q8IUB5 93 aa3.56□□□□□ -1.84
PTPN4-203ENST00000430976 ANKRD11Q6UB99 2663 aaPredicted RBP3.56□□□□□ -1.84
PTPN4-203ENST00000430976 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.56□□□□□ -1.84
PTPN4-203ENST00000430976 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.56□□□□□ -1.84
PTPN4-203ENST00000430976 IGKV3-20P01619 116 aa3.56□□□□□ -1.84
PTPN4-203ENST00000430976 EGFEM1PQ0D2K5 195 aa3.56□□□□□ -1.84
PTPN4-203ENST00000430976 PCOTHQ58A44 107 aa3.56□□□□□ -1.84
PTPN4-203ENST00000430976 CSNK1G2-AS1Q8NCQ2 148 aa3.56□□□□□ -1.84
PTPN4-203ENST00000430976 CDKN2A-AS1Q9UH64 79 aa3.56□□□□□ -1.84
PTPN4-203ENST00000430976 CPAMD8Q8IZJ3 1885 aa3.56□□□□□ -1.84
PTPN4-203ENST00000430976 CHD7Q9P2D1 2997 aa3.56□□□□□ -1.84
PTPN4-203ENST00000430976 CXorf51AA0A1B0GTR3 108 aa3.55□□□□□ -1.84
PTPN4-203ENST00000430976 EIF4EBP1Q13541 118 aaPredicted RBP3.55□□□□□ -1.84
PTPN4-203ENST00000430976 ZNF575Q86XF7 245 aa3.55□□□□□ -1.84
PTPN4-203ENST00000430976 WFDC10BQ8IUB3 73 aa3.55□□□□□ -1.84
PTPN4-203ENST00000430976 SONP18583 2426 aaKnown RBP3.55□□□□□ -1.84
PTPN4-203ENST00000430976 CSPG4Q6UVK1 2322 aa3.55□□□□□ -1.84
PTPN4-203ENST00000430976 TRBV6-4A0A1B0GX49 114 aa3.55□□□□□ -1.84
PTPN4-203ENST00000430976 IGLV1-44P01699 117 aa3.55□□□□□ -1.84
PTPN4-203ENST00000430976 LITAFQ99732 161 aa3.55□□□□□ -1.84
PTPN4-203ENST00000430976 LINC01558Q9Y6Z2 57 aa3.55□□□□□ -1.84
PTPN4-203ENST00000430976 CFAP47Q6ZTR5 3102 aa3.55□□□□□ -1.84
PTPN4-203ENST00000430976 NOTCH2NLQ7Z3S9 236 aa3.55□□□□□ -1.84
PTPN4-203ENST00000430976 DEFB1P60022 68 aa3.54□□□□□ -1.84
PTPN4-203ENST00000430976 FN1P02751 2386 aaKnown RBP3.54□□□□□ -1.84
PTPN4-203ENST00000430976 LINC01546A6NGU7 62 aa3.54□□□□□ -1.84
PTPN4-203ENST00000430976 H3BQ85 93 aa3.54□□□□□ -1.84
PTPN4-203ENST00000430976 CLPSP04118 112 aa3.54□□□□□ -1.84
PTPN4-203ENST00000430976 ASB16-AS1Q495Z4 193 aa3.54□□□□□ -1.84
PTPN4-203ENST00000430976 C22orf24Q9Y442 160 aa3.54□□□□□ -1.84
PTPN4-203ENST00000430976 PIEZO2Q9H5I5 2752 aa3.54□□□□□ -1.84
PTPN4-203ENST00000430976 CHCHD7Q9BUK0 85 aa3.54□□□□□ -1.84
PTPN4-203ENST00000430976 ZFHX3Q15911 3703 aa3.53□□□□□ -1.84
PTPN4-203ENST00000430976 H3BRN7 92 aa3.53□□□□□ -1.84
PTPN4-203ENST00000430976 PDE6HQ13956 83 aa3.53□□□□□ -1.84
PTPN4-203ENST00000430976 CASC10Q5T4H9 136 aa3.53□□□□□ -1.84
PTPN4-203ENST00000430976 FLVCR1-AS1Q8TAF5 88 aa3.53□□□□□ -1.84
PTPN4-203ENST00000430976 SRRM5B3KS81 715 aa3.53□□□□□ -1.84
PTPN4-203ENST00000430976 M0R2N4 97 aa3.53□□□□□ -1.84
PTPN4-203ENST00000430976 CTSGP08311 255 aa3.53□□□□□ -1.84
PTPN4-203ENST00000430976 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.53□□□□□ -1.84
PTPN4-203ENST00000430976 TMEM105Q8N8V8 129 aa3.53□□□□□ -1.84
PTPN4-203ENST00000430976 LINC00483Q53H64 154 aa3.52□□□□□ -1.85
PTPN4-203ENST00000430976 TLN2Q9Y4G6 2542 aa3.52□□□□□ -1.85
PTPN4-203ENST00000430976 IGLV4-60A0A075B6I1 120 aa3.52□□□□□ -1.85
PTPN4-203ENST00000430976 ST20-AS1Q8NBB2 130 aa3.52□□□□□ -1.85
PTPN4-203ENST00000430976 CELSR3Q9NYQ7 3312 aa3.52□□□□□ -1.85
PTPN4-203ENST00000430976 CCL3L1P16619 93 aa3.52□□□□□ -1.85
PTPN4-203ENST00000430976 FRYLO94915 3013 aa3.51□□□□□ -1.85
PTPN4-203ENST00000430976 LAMA1P25391 3075 aa3.51□□□□□ -1.85
PTPN4-203ENST00000430976 A0A1W2PNU3 283 aaPredicted RBP3.51□□□□□ -1.85
PTPN4-203ENST00000430976 UQCR11O14957 56 aa3.51□□□□□ -1.85
PTPN4-203ENST00000430976 LPAL2Q16609 132 aa3.51□□□□□ -1.85
PTPN4-203ENST00000430976 Q6YL49 198 aa3.51□□□□□ -1.85
PTPN4-203ENST00000430976 Q8NDZ9 215 aa3.51□□□□□ -1.85
PTPN4-203ENST00000430976 CNFNQ9BYD5 112 aa3.51□□□□□ -1.85
PTPN4-203ENST00000430976 P0C880 135 aa3.51□□□□□ -1.85
PTPN4-203ENST00000430976 LYPD2Q6UXB3 125 aa3.51□□□□□ -1.85
PTPN4-203ENST00000430976 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
PTPN4-203ENST00000430976 NPBQ8NG41 125 aa3.51□□□□□ -1.85
PTPN4-203ENST00000430976 C16orf74Q96GX8 76 aa3.51□□□□□ -1.85
PTPN4-203ENST00000430976 TRIOO75962 3097 aa3.51□□□□□ -1.85
PTPN4-203ENST00000430976 A8MUU9 505 aa3.51□□□□□ -1.85
PTPN4-203ENST00000430976 MUC7Q8TAX7 377 aa3.5□□□□□ -1.85
PTPN4-203ENST00000430976 DMAC1Q96GE9 116 aa3.5□□□□□ -1.85
PTPN4-203ENST00000430976 COX7BP24311 80 aa3.5□□□□□ -1.85
PTPN4-203ENST00000430976 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
PTPN4-203ENST00000430976 TMEM167AQ8TBQ9 72 aa3.5□□□□□ -1.85
PTPN4-203ENST00000430976 ZFYVE26Q68DK2 2539 aa3.5□□□□□ -1.85
PTPN4-203ENST00000430976 NDUFA1O15239 70 aa3.5□□□□□ -1.85
PTPN4-203ENST00000430976 ASPMQ8IZT6 3477 aa3.5□□□□□ -1.85
PTPN4-203ENST00000430976 TRGV1A0A0A0MS02 117 aa3.49□□□□□ -1.85
PTPN4-203ENST00000430976 C10orf25Q5T742 122 aa3.49□□□□□ -1.85
PTPN4-203ENST00000430976 DEFB119Q8N690 84 aa3.49□□□□□ -1.85
PTPN4-203ENST00000430976 C7orf33Q8WU49 177 aa3.49□□□□□ -1.85
PTPN4-203ENST00000430976 KAAG1Q9UBP8 84 aa3.49□□□□□ -1.85
PTPN4-203ENST00000430976 A8MTW9 85 aa3.49□□□□□ -1.85
PTPN4-203ENST00000430976 ACYP2P14621 99 aa3.49□□□□□ -1.85
PTPN4-203ENST00000430976 LINC00575Q6W349 94 aa3.49□□□□□ -1.85
PTPN4-203ENST00000430976 ATMQ13315 3056 aa3.49□□□□□ -1.85
PTPN4-203ENST00000430976 Q9BRP9 147 aa3.49□□□□□ -1.85
PTPN4-203ENST00000430976 KLK12Q9UKR0 248 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms