RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 A0A0U1RRA0 63 aa6.82□□□□□ -1.32
HDAC4-202ENST00000430200 LINC00310P59036 64 aa6.82□□□□□ -1.32
HDAC4-202ENST00000430200 FAM19A1Q7Z5A9 133 aa6.82□□□□□ -1.32
HDAC4-202ENST00000430200 C3orf22Q8N5N4 141 aa6.82□□□□□ -1.32
HDAC4-202ENST00000430200 CHTOPQ9Y3Y2 248 aaKnown RBP6.82□□□□□ -1.32
HDAC4-202ENST00000430200 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
HDAC4-202ENST00000430200 CBLN2Q8IUK8 224 aa6.81□□□□□ -1.32
HDAC4-202ENST00000430200 TSPEAR-AS2P59090 65 aa6.8□□□□□ -1.32
HDAC4-202ENST00000430200 COX17Q14061 63 aa6.8□□□□□ -1.32
HDAC4-202ENST00000430200 LINC00304Q8N9R0 145 aa6.8□□□□□ -1.32
HDAC4-202ENST00000430200 SNAPINO95295 136 aa6.79□□□□□ -1.32
HDAC4-202ENST00000430200 SMIM13P0DJ93 91 aa6.79□□□□□ -1.32
HDAC4-202ENST00000430200 SVBPQ8N300 66 aa6.79□□□□□ -1.32
HDAC4-202ENST00000430200 FAM19A2Q8N3H0 131 aa6.79□□□□□ -1.32
HDAC4-202ENST00000430200 IFI27L1Q96BM0 104 aa6.79□□□□□ -1.32
HDAC4-202ENST00000430200 PLEKHB2Q96CS7 222 aa6.79□□□□□ -1.32
HDAC4-202ENST00000430200 TRAV12-1A0A0B4J245 112 aa6.78□□□□□ -1.32
HDAC4-202ENST00000430200 NCR3O14931 201 aa6.78□□□□□ -1.32
HDAC4-202ENST00000430200 HIGD2AQ9BW72 106 aa6.78□□□□□ -1.32
HDAC4-202ENST00000430200 LINC00158P58513 81 aa6.77□□□□□ -1.33
HDAC4-202ENST00000430200 RPL24P83731 157 aaKnown RBP6.77□□□□□ -1.33
HDAC4-202ENST00000430200 CHCHD1Q96BP2 118 aaKnown RBP6.77□□□□□ -1.33
HDAC4-202ENST00000430200 KRTAP4-16G5E9R7 235 aaPredicted RBP6.76□□□□□ -1.33
HDAC4-202ENST00000430200 MIR7-3HGQ8N6C7 128 aa6.76□□□□□ -1.33
HDAC4-202ENST00000430200 SPRR4Q96PI1 79 aa6.76□□□□□ -1.33
HDAC4-202ENST00000430200 SPRR1AP35321 89 aa6.75□□□□□ -1.33
HDAC4-202ENST00000430200 IGKV2D-26A0A0A0MRZ7 120 aa6.74□□□□□ -1.33
HDAC4-202ENST00000430200 H0Y8G0 127 aa6.74□□□□□ -1.33
HDAC4-202ENST00000430200 SFTA2Q6UW10 78 aa6.74□□□□□ -1.33
HDAC4-202ENST00000430200 BOD1L2Q8IYS8 172 aa6.74□□□□□ -1.33
HDAC4-202ENST00000430200 DAND5Q8N907 189 aa6.74□□□□□ -1.33
HDAC4-202ENST00000430200 TRBV10-3A0A0K0K1G6 114 aa6.73□□□□□ -1.33
HDAC4-202ENST00000430200 SERF1AO75920 110 aa6.73□□□□□ -1.33
HDAC4-202ENST00000430200 NDUFA5Q16718 116 aa6.73□□□□□ -1.33
HDAC4-202ENST00000430200 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
HDAC4-202ENST00000430200 SMCR5Q8TEV8 140 aa6.73□□□□□ -1.33
HDAC4-202ENST00000430200 NDUFA12Q9UI09 145 aa6.73□□□□□ -1.33
HDAC4-202ENST00000430200 PRYO14603 147 aa6.72□□□□□ -1.33
HDAC4-202ENST00000430200 HSBP1O75506 76 aa6.72□□□□□ -1.33
HDAC4-202ENST00000430200 TRGC2P03986 189 aa6.72□□□□□ -1.33
HDAC4-202ENST00000430200 TPRXLQ17RH7 258 aa6.72□□□□□ -1.33
HDAC4-202ENST00000430200 MEIG1Q5JSS6 88 aa6.72□□□□□ -1.33
HDAC4-202ENST00000430200 PMCHL2Q9BQD1 86 aa6.72□□□□□ -1.33
HDAC4-202ENST00000430200 EIF4EBP3O60516 100 aaPredicted RBP6.71□□□□□ -1.34
HDAC4-202ENST00000430200 ERC2-IT1O76042 136 aa6.71□□□□□ -1.34
HDAC4-202ENST00000430200 KCNQ1DNQ9H478 68 aa6.71□□□□□ -1.34
HDAC4-202ENST00000430200 IGLV7-46A0A075B6I9 117 aa6.7□□□□□ -1.34
HDAC4-202ENST00000430200 LINC00337Q8N6G1 96 aa6.7□□□□□ -1.34
HDAC4-202ENST00000430200 PPDPFQ9H3Y8 114 aa6.7□□□□□ -1.34
HDAC4-202ENST00000430200 Q8NBF4 154 aa6.69□□□□□ -1.34
HDAC4-202ENST00000430200 Q9BRP9 147 aa6.69□□□□□ -1.34
HDAC4-202ENST00000430200 LEPROTO15243 131 aa6.68□□□□□ -1.34
HDAC4-202ENST00000430200 HERV-K104P63124 156 aa6.68□□□□□ -1.34
HDAC4-202ENST00000430200 SOSTDC1Q6X4U4 206 aa6.68□□□□□ -1.34
HDAC4-202ENST00000430200 B5MCH6 92 aa6.67□□□□□ -1.34
HDAC4-202ENST00000430200 LEPROTL1O95214 131 aa6.67□□□□□ -1.34
HDAC4-202ENST00000430200 LINC00483Q53H64 154 aa6.67□□□□□ -1.34
HDAC4-202ENST00000430200 LOC107984156A0A0G2JMH3 177 aa6.66□□□□□ -1.34
HDAC4-202ENST00000430200 MYMXA0A1B0GTQ4 84 aa6.66□□□□□ -1.34
HDAC4-202ENST00000430200 J3QQQ9 107 aa6.66□□□□□ -1.34
HDAC4-202ENST00000430200 FABP4P15090 132 aa6.66□□□□□ -1.34
HDAC4-202ENST00000430200 ARL17AQ8IVW1 177 aa6.66□□□□□ -1.34
HDAC4-202ENST00000430200 SLC7A5P1Q8MH63 180 aa6.66□□□□□ -1.34
HDAC4-202ENST00000430200 CDIP1Q9H305 208 aa6.66□□□□□ -1.34
HDAC4-202ENST00000430200 ETDCA0A1B0GVM5 59 aa6.65□□□□□ -1.34
HDAC4-202ENST00000430200 COLCA2A8K830 154 aa6.65□□□□□ -1.34
HDAC4-202ENST00000430200 KRTAP13-3Q3SY46 172 aa6.65□□□□□ -1.34
HDAC4-202ENST00000430200 ATP6V1G1O75348 118 aa6.64□□□□□ -1.35
HDAC4-202ENST00000430200 DPM2O94777 84 aa6.64□□□□□ -1.35
HDAC4-202ENST00000430200 PLNP26678 52 aa6.64□□□□□ -1.35
HDAC4-202ENST00000430200 DDTP30046 118 aa6.64□□□□□ -1.35
HDAC4-202ENST00000430200 NPC2P61916 151 aa6.64□□□□□ -1.35
HDAC4-202ENST00000430200 ADAMTSL4-AS1Q5T5F5 129 aa6.64□□□□□ -1.35
HDAC4-202ENST00000430200 KRTAP4-1Q9BYQ7 146 aa6.64□□□□□ -1.35
HDAC4-202ENST00000430200 ZNF706Q9Y5V0 76 aaPredicted RBP6.64□□□□□ -1.35
HDAC4-202ENST00000430200 IGLV6-57P01721 117 aa6.63□□□□□ -1.35
HDAC4-202ENST00000430200 MOBPQ13875 183 aa6.63□□□□□ -1.35
HDAC4-202ENST00000430200 GAGE2AQ6NT46 116 aa6.63□□□□□ -1.35
HDAC4-202ENST00000430200 Q6ZRX8 168 aa6.63□□□□□ -1.35
HDAC4-202ENST00000430200 KRTAP9-2Q9BYQ4 174 aa6.63□□□□□ -1.35
HDAC4-202ENST00000430200 IGKCP01834 107 aa6.62□□□□□ -1.35
HDAC4-202ENST00000430200 CTAG1AP78358 180 aa6.62□□□□□ -1.35
HDAC4-202ENST00000430200 LITAFQ99732 161 aa6.62□□□□□ -1.35
HDAC4-202ENST00000430200 SPANXB1Q9NS25 103 aaPredicted RBP6.62□□□□□ -1.35
HDAC4-202ENST00000430200 IGLV9-49A0A0B4J1Y8 123 aa6.61□□□□□ -1.35
HDAC4-202ENST00000430200 A0A0J9YXY3 114 aa6.61□□□□□ -1.35
HDAC4-202ENST00000430200 TRBV10-2A0A0K0K1G8 114 aa6.61□□□□□ -1.35
HDAC4-202ENST00000430200 SPAG11AQ6PDA7 123 aa6.61□□□□□ -1.35
HDAC4-202ENST00000430200 MAP1LC3CQ9BXW4 147 aa6.61□□□□□ -1.35
HDAC4-202ENST00000430200 LGALS3P17931 250 aaKnown RBP6.6□□□□□ -1.35
HDAC4-202ENST00000430200 FP248Q71RG6 208 aaPredicted RBP6.6□□□□□ -1.35
HDAC4-202ENST00000430200 Q8N377 158 aa6.6□□□□□ -1.35
HDAC4-202ENST00000430200 ST20-AS1Q8NBB2 130 aa6.6□□□□□ -1.35
HDAC4-202ENST00000430200 HSPB8Q9UJY1 196 aa6.6□□□□□ -1.35
HDAC4-202ENST00000430200 A0A0U1RQV1 116 aa6.59□□□□□ -1.35
HDAC4-202ENST00000430200 E9PLD3 99 aa6.59□□□□□ -1.35
HDAC4-202ENST00000430200 NMUP48645 174 aa6.59□□□□□ -1.35
HDAC4-202ENST00000430200 TTTY13Q9BZ97 58 aa6.59□□□□□ -1.35
HDAC4-202ENST00000430200 TRAV23DV6A0A075B6W5 121 aa6.58□□□□□ -1.36
HDAC4-202ENST00000430200 LINC00587B1AMM8 73 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms