RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 IGLV7-46A0A075B6I9 117 aa8.59□□□□□ -1.03
MSH5-208ENST00000429846 C11orf86A6NJI1 115 aa8.59□□□□□ -1.03
MSH5-208ENST00000429846 C10orf91Q5T1B1 145 aa8.59□□□□□ -1.03
MSH5-208ENST00000429846 IFITM2Q01629 132 aa8.58□□□□□ -1.04
MSH5-208ENST00000429846 LCE2AQ5TA79 106 aaPredicted RBP8.58□□□□□ -1.04
MSH5-208ENST00000429846 SPAG11AQ6PDA7 123 aa8.58□□□□□ -1.04
MSH5-208ENST00000429846 BAGE3Q86Y29 109 aa8.58□□□□□ -1.04
MSH5-208ENST00000429846 Q8NDZ9 215 aa8.58□□□□□ -1.04
MSH5-208ENST00000429846 HIGD2AQ9BW72 106 aa8.58□□□□□ -1.04
MSH5-208ENST00000429846 TRAPPC1Q9Y5R8 145 aa8.58□□□□□ -1.04
MSH5-208ENST00000429846 PMCHL1Q16048 86 aa8.57□□□□□ -1.04
MSH5-208ENST00000429846 ZNF706Q9Y5V0 76 aaPredicted RBP8.57□□□□□ -1.04
MSH5-208ENST00000429846 LINC00158P58513 81 aa8.56□□□□□ -1.04
MSH5-208ENST00000429846 COMMD7Q86VX2 200 aa8.56□□□□□ -1.04
MSH5-208ENST00000429846 C3orf22Q8N5N4 141 aa8.56□□□□□ -1.04
MSH5-208ENST00000429846 SPRR4Q96PI1 79 aa8.55□□□□□ -1.04
MSH5-208ENST00000429846 KRTAP9-2Q9BYQ4 174 aa8.55□□□□□ -1.04
MSH5-208ENST00000429846 PPDPFQ9H3Y8 114 aa8.54□□□□□ -1.04
MSH5-208ENST00000429846 CHTOPQ9Y3Y2 248 aaKnown RBP8.54□□□□□ -1.04
MSH5-208ENST00000429846 PRYO14603 147 aa8.53□□□□□ -1.04
MSH5-208ENST00000429846 FP248Q71RG6 208 aaPredicted RBP8.53□□□□□ -1.04
MSH5-208ENST00000429846 TRAV12-1A0A0B4J245 112 aa8.52□□□□□ -1.05
MSH5-208ENST00000429846 TMEM223A0PJW6 202 aa8.52□□□□□ -1.05
MSH5-208ENST00000429846 ATP6V1G1O75348 118 aa8.52□□□□□ -1.05
MSH5-208ENST00000429846 C4orf48Q5BLP8 95 aa8.51□□□□□ -1.05
MSH5-208ENST00000429846 LINC00337Q8N6G1 96 aa8.51□□□□□ -1.05
MSH5-208ENST00000429846 FAT4Q6V0I7 4981 aa8.51□□□□□ -1.05
MSH5-208ENST00000429846 A0A0U1RRA0 63 aa8.5□□□□□ -1.05
MSH5-208ENST00000429846 LINC00587B1AMM8 73 aa8.5□□□□□ -1.05
MSH5-208ENST00000429846 SPRR1AP35321 89 aa8.5□□□□□ -1.05
MSH5-208ENST00000429846 HERV-K104P63124 156 aa8.5□□□□□ -1.05
MSH5-208ENST00000429846 MEIG1Q5JSS6 88 aa8.5□□□□□ -1.05
MSH5-208ENST00000429846 BOD1L2Q8IYS8 172 aa8.49□□□□□ -1.05
MSH5-208ENST00000429846 IFI27L1Q96BM0 104 aa8.49□□□□□ -1.05
MSH5-208ENST00000429846 CHCHD1Q96BP2 118 aaKnown RBP8.49□□□□□ -1.05
MSH5-208ENST00000429846 KCNQ1DNQ9H478 68 aa8.49□□□□□ -1.05
MSH5-208ENST00000429846 SMIM13P0DJ93 91 aa8.48□□□□□ -1.05
MSH5-208ENST00000429846 ETDCA0A1B0GVM5 59 aa8.47□□□□□ -1.05
MSH5-208ENST00000429846 S100A12P80511 92 aa8.47□□□□□ -1.05
MSH5-208ENST00000429846 MIR7-3HGQ8N6C7 128 aa8.47□□□□□ -1.05
MSH5-208ENST00000429846 Q8NBF4 154 aa8.47□□□□□ -1.05
MSH5-208ENST00000429846 MUC17Q685J3 4493 aa8.46□□□□□ -1.05
MSH5-208ENST00000429846 KRTAP4-16G5E9R7 235 aaPredicted RBP8.46□□□□□ -1.06
MSH5-208ENST00000429846 NCR3O14931 201 aa8.46□□□□□ -1.06
MSH5-208ENST00000429846 SNAPINO95295 136 aa8.46□□□□□ -1.06
MSH5-208ENST00000429846 SPINK1P00995 79 aa8.46□□□□□ -1.06
MSH5-208ENST00000429846 MAP1LC3CQ9BXW4 147 aa8.46□□□□□ -1.06
MSH5-208ENST00000429846 APOC3P02656 99 aa8.45□□□□□ -1.06
MSH5-208ENST00000429846 NDUFA5Q16718 116 aa8.45□□□□□ -1.06
MSH5-208ENST00000429846 LINC00483Q53H64 154 aa8.45□□□□□ -1.06
MSH5-208ENST00000429846 SVBPQ8N300 66 aa8.45□□□□□ -1.06
MSH5-208ENST00000429846 SMCR5Q8TEV8 140 aa8.45□□□□□ -1.06
MSH5-208ENST00000429846 MYMXA0A1B0GTQ4 84 aa8.44□□□□□ -1.06
MSH5-208ENST00000429846 DAND5Q8N907 189 aa8.44□□□□□ -1.06
MSH5-208ENST00000429846 NDUFA12Q9UI09 145 aa8.44□□□□□ -1.06
MSH5-208ENST00000429846 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
MSH5-208ENST00000429846 KRTAP13-3Q3SY46 172 aa8.43□□□□□ -1.06
MSH5-208ENST00000429846 RPS29P62273 56 aaKnown RBP8.42□□□□□ -1.06
MSH5-208ENST00000429846 FAM19A2Q8N3H0 131 aa8.42□□□□□ -1.06
MSH5-208ENST00000429846 LOC107984156A0A0G2JMH3 177 aa8.41□□□□□ -1.06
MSH5-208ENST00000429846 HSBP1O75506 76 aa8.41□□□□□ -1.06
MSH5-208ENST00000429846 ASB16-AS1Q495Z4 193 aa8.41□□□□□ -1.06
MSH5-208ENST00000429846 ARL17AQ8IVW1 177 aa8.41□□□□□ -1.06
MSH5-208ENST00000429846 TRBV10-2A0A0K0K1G8 114 aa8.4□□□□□ -1.06
MSH5-208ENST00000429846 GAGE2AQ6NT46 116 aa8.4□□□□□ -1.06
MSH5-208ENST00000429846 YPEL4Q96NS1 127 aa8.4□□□□□ -1.06
MSH5-208ENST00000429846 B5MCH6 92 aa8.39□□□□□ -1.07
MSH5-208ENST00000429846 SSBP3-AS1Q7Z2R9 100 aa8.39□□□□□ -1.07
MSH5-208ENST00000429846 DDTP30046 118 aa8.38□□□□□ -1.07
MSH5-208ENST00000429846 MOBPQ13875 183 aa8.38□□□□□ -1.07
MSH5-208ENST00000429846 LCE2DQ5TA82 110 aaPredicted RBP8.38□□□□□ -1.07
MSH5-208ENST00000429846 IGLV9-49A0A0B4J1Y8 123 aa8.37□□□□□ -1.07
MSH5-208ENST00000429846 LEPROTO15243 131 aa8.37□□□□□ -1.07
MSH5-208ENST00000429846 PLNP26678 52 aa8.37□□□□□ -1.07
MSH5-208ENST00000429846 SEC61BP60468 96 aaKnown RBP8.37□□□□□ -1.07
MSH5-208ENST00000429846 Q6ZRX8 168 aa8.37□□□□□ -1.07
MSH5-208ENST00000429846 MIEN1Q9BRT3 115 aa8.37□□□□□ -1.07
MSH5-208ENST00000429846 SPANXB1Q9NS25 103 aaPredicted RBP8.37□□□□□ -1.07
MSH5-208ENST00000429846 H0Y8G0 127 aa8.36□□□□□ -1.07
MSH5-208ENST00000429846 NMUP48645 174 aa8.36□□□□□ -1.07
MSH5-208ENST00000429846 TSPEAR-AS2P59090 65 aa8.36□□□□□ -1.07
MSH5-208ENST00000429846 SLC25A20O43772 301 aa8.35□□□□□ -1.07
MSH5-208ENST00000429846 ERC2-IT1O76042 136 aa8.35□□□□□ -1.07
MSH5-208ENST00000429846 LEPROTL1O95214 131 aa8.35□□□□□ -1.07
MSH5-208ENST00000429846 NDUFC2O95298 119 aa8.35□□□□□ -1.07
MSH5-208ENST00000429846 Q8N377 158 aa8.35□□□□□ -1.07
MSH5-208ENST00000429846 Q9BRP9 147 aa8.35□□□□□ -1.07
MSH5-208ENST00000429846 J3QQQ9 107 aa8.34□□□□□ -1.07
MSH5-208ENST00000429846 HERVK_113P61574 105 aa8.34□□□□□ -1.07
MSH5-208ENST00000429846 JOSD1Q15040 202 aaPredicted RBP8.34□□□□□ -1.07
MSH5-208ENST00000429846 KRTAP9-6A0A140TA67 174 aa8.33□□□□□ -1.08
MSH5-208ENST00000429846 IGLV6-57P01721 117 aa8.33□□□□□ -1.08
MSH5-208ENST00000429846 S100A7L2Q5SY68 101 aa8.33□□□□□ -1.08
MSH5-208ENST00000429846 LGALS3P17931 250 aaKnown RBP8.32□□□□□ -1.08
MSH5-208ENST00000429846 LINC01547P58512 204 aaPredicted RBP8.32□□□□□ -1.08
MSH5-208ENST00000429846 TRAV23DV6A0A075B6W5 121 aa8.31□□□□□ -1.08
MSH5-208ENST00000429846 DPM2O94777 84 aa8.31□□□□□ -1.08
MSH5-208ENST00000429846 HSPB8Q9UJY1 196 aa8.31□□□□□ -1.08
MSH5-208ENST00000429846 SERF1AO75920 110 aa8.3□□□□□ -1.08
MSH5-208ENST00000429846 CBY1Q9Y3M2 126 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms