RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 SPAG11BQ08648 103 aa7.79□□□□□ -1.16
LINC01238-203ENST00000429456 UNQ6190/PRO20217Q6UXQ8 127 aa7.79□□□□□ -1.16
LINC01238-203ENST00000429456 C6orf223Q8N319 242 aa7.79□□□□□ -1.16
LINC01238-203ENST00000429456 A0A0J9YWU9 116 aa7.78□□□□□ -1.16
LINC01238-203ENST00000429456 IGHV4-30-4P0DP06 118 aa7.78□□□□□ -1.16
LINC01238-203ENST00000429456 RPS28P62857 69 aaKnown RBP7.78□□□□□ -1.16
LINC01238-203ENST00000429456 RPL18AQ02543 176 aaKnown RBP7.78□□□□□ -1.16
LINC01238-203ENST00000429456 S100A7L2Q5SY68 101 aa7.78□□□□□ -1.16
LINC01238-203ENST00000429456 LINC00575Q6W349 94 aa7.78□□□□□ -1.16
LINC01238-203ENST00000429456 PRR34Q9NV39 138 aa7.78□□□□□ -1.16
LINC01238-203ENST00000429456 V9GYY9 64 aa7.78□□□□□ -1.16
LINC01238-203ENST00000429456 NBEAL2Q6ZNJ1 2754 aa7.78□□□□□ -1.16
LINC01238-203ENST00000429456 SPART-AS1P0CW21 52 aa7.77□□□□□ -1.17
LINC01238-203ENST00000429456 C1orf43Q9BWL3 253 aa7.77□□□□□ -1.17
LINC01238-203ENST00000429456 CYSRT1A8MQ03 144 aa7.77□□□□□ -1.17
LINC01238-203ENST00000429456 C4orf26Q17RF5 130 aa7.76□□□□□ -1.17
LINC01238-203ENST00000429456 A0A087WVE0 104 aa7.76□□□□□ -1.17
LINC01238-203ENST00000429456 HTN3P15516 51 aa7.76□□□□□ -1.17
LINC01238-203ENST00000429456 KLK12Q9UKR0 248 aa7.76□□□□□ -1.17
LINC01238-203ENST00000429456 GVQW2A0A096LPI5 108 aaPredicted RBP7.75□□□□□ -1.17
LINC01238-203ENST00000429456 IGLV6-57P01721 117 aa7.75□□□□□ -1.17
LINC01238-203ENST00000429456 CRYGAP11844 174 aa7.75□□□□□ -1.17
LINC01238-203ENST00000429456 ENHOQ6UWT2 76 aa7.75□□□□□ -1.17
LINC01238-203ENST00000429456 HRCT1Q6UXD1 115 aa7.75□□□□□ -1.17
LINC01238-203ENST00000429456 PRO0628Q9UI54 55 aa7.75□□□□□ -1.17
LINC01238-203ENST00000429456 hADV29S1A0JD25 119 aa7.74□□□□□ -1.17
LINC01238-203ENST00000429456 ATP5EP2Q5VTU8 51 aa7.74□□□□□ -1.17
LINC01238-203ENST00000429456 LYPD5Q6UWN5 251 aa7.74□□□□□ -1.17
LINC01238-203ENST00000429456 UNC79Q9P2D8 2635 aa7.74□□□□□ -1.17
LINC01238-203ENST00000429456 INAFM1C9JVW0 142 aa7.73□□□□□ -1.17
LINC01238-203ENST00000429456 USP17L23D6RBM5 183 aa7.73□□□□□ -1.17
LINC01238-203ENST00000429456 HECTD1Q9ULT8 2610 aa7.72□□□□□ -1.17
LINC01238-203ENST00000429456 VWFP04275 2813 aa7.72□□□□□ -1.17
LINC01238-203ENST00000429456 FASNP49327 2511 aaKnown RBP7.72□□□□□ -1.17
LINC01238-203ENST00000429456 ZNF561-AS1K7EIQ3 104 aa7.72□□□□□ -1.17
LINC01238-203ENST00000429456 SERP2Q8N6R1 65 aa7.72□□□□□ -1.17
LINC01238-203ENST00000429456 C6orf48Q9UBA6 75 aa7.72□□□□□ -1.17
LINC01238-203ENST00000429456 Q5XG85 94 aa7.71□□□□□ -1.17
LINC01238-203ENST00000429456 Q6ZQT0 140 aa7.71□□□□□ -1.17
LINC01238-203ENST00000429456 LOC110117498A0A087WWA1 95 aa7.71□□□□□ -1.18
LINC01238-203ENST00000429456 RBM3P98179 157 aaKnown RBP7.71□□□□□ -1.18
LINC01238-203ENST00000429456 TRBV10-3A0A0K0K1G6 114 aa7.7□□□□□ -1.18
LINC01238-203ENST00000429456 WFDC9Q8NEX5 89 aa7.7□□□□□ -1.18
LINC01238-203ENST00000429456 UBL5Q9BZL1 73 aa7.7□□□□□ -1.18
LINC01238-203ENST00000429456 PKIGQ9Y2B9 76 aa7.7□□□□□ -1.18
LINC01238-203ENST00000429456 UPK3BQ9BT76 320 aa7.69□□□□□ -1.18
LINC01238-203ENST00000429456 TRAV23DV6A0A075B6W5 121 aa7.69□□□□□ -1.18
LINC01238-203ENST00000429456 H3BQ85 93 aa7.69□□□□□ -1.18
LINC01238-203ENST00000429456 LAMTOR3Q9UHA4 124 aa7.69□□□□□ -1.18
LINC01238-203ENST00000429456 NOTCH2Q04721 2471 aa7.68□□□□□ -1.18
LINC01238-203ENST00000429456 Q6ZQY7 126 aa7.68□□□□□ -1.18
LINC01238-203ENST00000429456 CYSTM1Q9H1C7 97 aa7.68□□□□□ -1.18
LINC01238-203ENST00000429456 XAGE1AQ9HD64 81 aa7.68□□□□□ -1.18
LINC01238-203ENST00000429456 FAM19A1Q7Z5A9 133 aa7.67□□□□□ -1.18
LINC01238-203ENST00000429456 DIRC1Q969H9 104 aa7.67□□□□□ -1.18
LINC01238-203ENST00000429456 M0R2N4 97 aa7.66□□□□□ -1.18
LINC01238-203ENST00000429456 KRTAP26-1Q6PEX3 210 aa7.66□□□□□ -1.18
LINC01238-203ENST00000429456 WFDC10BQ8IUB3 73 aa7.66□□□□□ -1.18
LINC01238-203ENST00000429456 H3BNG1 76 aa7.65□□□□□ -1.18
LINC01238-203ENST00000429456 ZNF73O43830 326 aaPredicted RBP7.65□□□□□ -1.18
LINC01238-203ENST00000429456 VPREB1P12018 145 aa7.65□□□□□ -1.18
LINC01238-203ENST00000429456 PDE6GP18545 87 aa7.65□□□□□ -1.18
LINC01238-203ENST00000429456 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.65□□□□□ -1.18
LINC01238-203ENST00000429456 DSCR8Q96T75 97 aa7.65□□□□□ -1.18
LINC01238-203ENST00000429456 GHRHP01286 108 aa7.64□□□□□ -1.19
LINC01238-203ENST00000429456 COX7BP24311 80 aa7.64□□□□□ -1.19
LINC01238-203ENST00000429456 HIGD2BQ4VC39 106 aa7.64□□□□□ -1.19
LINC01238-203ENST00000429456 KPRPQ5T749 579 aaPredicted RBP7.64□□□□□ -1.19
LINC01238-203ENST00000429456 CAMK2N2Q96S95 79 aa7.64□□□□□ -1.19
LINC01238-203ENST00000429456 TRBV7-6A0A0J9YX20 115 aa7.64□□□□□ -1.19
LINC01238-203ENST00000429456 OXTP01178 125 aa7.64□□□□□ -1.19
LINC01238-203ENST00000429456 ELOF1P60002 83 aaKnown RBP7.64□□□□□ -1.19
LINC01238-203ENST00000429456 EGFEM1PQ0D2K5 195 aa7.64□□□□□ -1.19
LINC01238-203ENST00000429456 LINC00336Q6ZUF6 198 aa7.63□□□□□ -1.19
LINC01238-203ENST00000429456 TENM1Q9UKZ4 2725 aa7.62□□□□□ -1.19
LINC01238-203ENST00000429456 TRRAPQ9Y4A5 3859 aa7.62□□□□□ -1.19
LINC01238-203ENST00000429456 LINC01547P58512 204 aaPredicted RBP7.62□□□□□ -1.19
LINC01238-203ENST00000429456 TMEM258P61165 79 aa7.62□□□□□ -1.19
LINC01238-203ENST00000429456 Q6ZRU5 148 aa7.62□□□□□ -1.19
LINC01238-203ENST00000429456 Q6ZVQ6 151 aa7.62□□□□□ -1.19
LINC01238-203ENST00000429456 C15orf56Q8N910 161 aa7.62□□□□□ -1.19
LINC01238-203ENST00000429456 M0R378 163 aa7.61□□□□□ -1.19
LINC01238-203ENST00000429456 DPH3Q96FX2 82 aa7.61□□□□□ -1.19
LINC01238-203ENST00000429456 RETNQ9HD89 108 aa7.61□□□□□ -1.19
LINC01238-203ENST00000429456 NSD1Q96L73 2696 aaPredicted RBP7.61□□□□□ -1.19
LINC01238-203ENST00000429456 TRBV7-4A0A0J9YYF1 115 aa7.61□□□□□ -1.19
LINC01238-203ENST00000429456 FAM236DA0A1B0GTK5 79 aa7.61□□□□□ -1.19
LINC01238-203ENST00000429456 FAM236CP0DP71 79 aa7.61□□□□□ -1.19
LINC01238-203ENST00000429456 C1orf195Q5TG92 126 aa7.61□□□□□ -1.19
LINC01238-203ENST00000429456 NDUFC2-KCTD14E9PQ53 114 aa7.6□□□□□ -1.19
LINC01238-203ENST00000429456 Q6ZTC4 211 aa7.6□□□□□ -1.19
LINC01238-203ENST00000429456 HIVEP1P15822 2718 aa7.59□□□□□ -1.19
LINC01238-203ENST00000429456 OTOGQ6ZRI0 2925 aa7.59□□□□□ -1.19
LINC01238-203ENST00000429456 BCE1O60756 84 aa7.59□□□□□ -1.19
LINC01238-203ENST00000429456 ESRGQ1W209 222 aa7.59□□□□□ -1.19
LINC01238-203ENST00000429456 HAMPP81172 84 aa7.59□□□□□ -1.2
LINC01238-203ENST00000429456 LINC00528Q8N1L1 170 aa7.59□□□□□ -1.2
LINC01238-203ENST00000429456 KRTAP10-11P60412 298 aa7.58□□□□□ -1.2
LINC01238-203ENST00000429456 CXCL6P80162 114 aa7.58□□□□□ -1.2
LINC01238-203ENST00000429456 ATRQ13535 2644 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms