RNA–Protein interactions for RNA: ENST00000428863.6

MDM2-215, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-215ENST00000428863 TMEM126AQ9H061 195 aa8.83□□□□□ -1
MDM2-215ENST00000428863 CHTOPQ9Y3Y2 248 aaKnown RBP8.83□□□□□ -1
MDM2-215ENST00000428863 TMEM223A0PJW6 202 aa8.82□□□□□ -1
MDM2-215ENST00000428863 RPL24P83731 157 aaKnown RBP8.81□□□□□ -1
MDM2-215ENST00000428863 FAM19A1Q7Z5A9 133 aa8.81□□□□□ -1
MDM2-215ENST00000428863 A0A0U1RRA0 63 aa8.8□□□□□ -1
MDM2-215ENST00000428863 FAM229BQ4G0N7 80 aa8.8□□□□□ -1
MDM2-215ENST00000428863 MUC2Q02817 5179 aa8.79□□□□□ -1
MDM2-215ENST00000428863 TRAV12-1A0A0B4J245 112 aa8.79□□□□□ -1
MDM2-215ENST00000428863 LINC00158P58513 81 aa8.79□□□□□ -1
MDM2-215ENST00000428863 IFI27L1Q96BM0 104 aa8.79□□□□□ -1
MDM2-215ENST00000428863 CHCHD1Q96BP2 118 aaKnown RBP8.79□□□□□ -1
MDM2-215ENST00000428863 SFTA2Q6UW10 78 aa8.78□□□□□ -1
MDM2-215ENST00000428863 PLEKHB2Q96CS7 222 aa8.78□□□□□ -1
MDM2-215ENST00000428863 FAM19A2Q8N3H0 131 aa8.77□□□□□ -1.01
MDM2-215ENST00000428863 RETNLBQ9BQ08 111 aa8.77□□□□□ -1.01
MDM2-215ENST00000428863 SMIM13P0DJ93 91 aa8.76□□□□□ -1.01
MDM2-215ENST00000428863 LINC00304Q8N9R0 145 aa8.76□□□□□ -1.01
MDM2-215ENST00000428863 COLCA2A8K830 154 aa8.75□□□□□ -1.01
MDM2-215ENST00000428863 C3orf22Q8N5N4 141 aa8.75□□□□□ -1.01
MDM2-215ENST00000428863 IGKV2D-26A0A0A0MRZ7 120 aa8.74□□□□□ -1.01
MDM2-215ENST00000428863 TRGC2P03986 189 aa8.73□□□□□ -1.01
MDM2-215ENST00000428863 LINC00310P59036 64 aa8.73□□□□□ -1.01
MDM2-215ENST00000428863 HIGD2AQ9BW72 106 aa8.73□□□□□ -1.01
MDM2-215ENST00000428863 MIR7-3HGQ8N6C7 128 aa8.72□□□□□ -1.01
MDM2-215ENST00000428863 HSBP1O75506 76 aa8.71□□□□□ -1.02
MDM2-215ENST00000428863 TSPEAR-AS2P59090 65 aa8.71□□□□□ -1.02
MDM2-215ENST00000428863 BOD1L2Q8IYS8 172 aa8.71□□□□□ -1.02
MDM2-215ENST00000428863 SPRR4Q96PI1 79 aa8.71□□□□□ -1.02
MDM2-215ENST00000428863 KRTAP4-16G5E9R7 235 aaPredicted RBP8.7□□□□□ -1.02
MDM2-215ENST00000428863 NCR3O14931 201 aa8.7□□□□□ -1.02
MDM2-215ENST00000428863 MEIG1Q5JSS6 88 aa8.7□□□□□ -1.02
MDM2-215ENST00000428863 NDUFA12Q9UI09 145 aa8.7□□□□□ -1.02
MDM2-215ENST00000428863 H0Y8G0 127 aa8.69□□□□□ -1.02
MDM2-215ENST00000428863 SPRR1AP35321 89 aa8.69□□□□□ -1.02
MDM2-215ENST00000428863 HERV-K104P63124 156 aa8.69□□□□□ -1.02
MDM2-215ENST00000428863 MUC17Q685J3 4493 aa8.69□□□□□ -1.02
MDM2-215ENST00000428863 PRYO14603 147 aa8.68□□□□□ -1.02
MDM2-215ENST00000428863 ATP6V1G1O75348 118 aa8.68□□□□□ -1.02
MDM2-215ENST00000428863 SERF1AO75920 110 aa8.68□□□□□ -1.02
MDM2-215ENST00000428863 KCNQ1DNQ9H478 68 aa8.68□□□□□ -1.02
MDM2-215ENST00000428863 TRBV10-3A0A0K0K1G6 114 aa8.67□□□□□ -1.02
MDM2-215ENST00000428863 MYMXA0A1B0GTQ4 84 aa8.66□□□□□ -1.02
MDM2-215ENST00000428863 LEPROTL1O95214 131 aa8.66□□□□□ -1.02
MDM2-215ENST00000428863 LINC00337Q8N6G1 96 aa8.66□□□□□ -1.02
MDM2-215ENST00000428863 DAND5Q8N907 189 aa8.66□□□□□ -1.02
MDM2-215ENST00000428863 SMCR5Q8TEV8 140 aa8.66□□□□□ -1.02
MDM2-215ENST00000428863 IGLV7-46A0A075B6I9 117 aa8.65□□□□□ -1.02
MDM2-215ENST00000428863 LEPROTO15243 131 aa8.65□□□□□ -1.02
MDM2-215ENST00000428863 CTAG1AP78358 180 aa8.65□□□□□ -1.02
MDM2-215ENST00000428863 LOC107984156A0A0G2JMH3 177 aa8.64□□□□□ -1.03
MDM2-215ENST00000428863 LINC00587B1AMM8 73 aa8.64□□□□□ -1.03
MDM2-215ENST00000428863 TPRXLQ17RH7 258 aa8.64□□□□□ -1.03
MDM2-215ENST00000428863 ARL17AQ8IVW1 177 aa8.64□□□□□ -1.03
MDM2-215ENST00000428863 PMCHL2Q9BQD1 86 aa8.64□□□□□ -1.03
MDM2-215ENST00000428863 FABP4P15090 132 aa8.63□□□□□ -1.03
MDM2-215ENST00000428863 PPDPFQ9H3Y8 114 aa8.63□□□□□ -1.03
MDM2-215ENST00000428863 J3QQQ9 107 aa8.62□□□□□ -1.03
MDM2-215ENST00000428863 MAP1LC3CQ9BXW4 147 aa8.62□□□□□ -1.03
MDM2-215ENST00000428863 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
MDM2-215ENST00000428863 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
MDM2-215ENST00000428863 ETDCA0A1B0GVM5 59 aa8.61□□□□□ -1.03
MDM2-215ENST00000428863 B5MCH6 92 aa8.61□□□□□ -1.03
MDM2-215ENST00000428863 ERC2-IT1O76042 136 aa8.61□□□□□ -1.03
MDM2-215ENST00000428863 SPAG11AQ6PDA7 123 aa8.61□□□□□ -1.03
MDM2-215ENST00000428863 ZNF706Q9Y5V0 76 aaPredicted RBP8.61□□□□□ -1.03
MDM2-215ENST00000428863 DPM2O94777 84 aa8.6□□□□□ -1.03
MDM2-215ENST00000428863 PLNP26678 52 aa8.6□□□□□ -1.03
MDM2-215ENST00000428863 LINC00483Q53H64 154 aa8.6□□□□□ -1.03
MDM2-215ENST00000428863 Q8NBF4 154 aa8.6□□□□□ -1.03
MDM2-215ENST00000428863 CDIP1Q9H305 208 aa8.6□□□□□ -1.03
MDM2-215ENST00000428863 FAT4Q6V0I7 4981 aa8.6□□□□□ -1.03
MDM2-215ENST00000428863 EIF4EBP3O60516 100 aaPredicted RBP8.59□□□□□ -1.03
MDM2-215ENST00000428863 HSPB8Q9UJY1 196 aa8.59□□□□□ -1.03
MDM2-215ENST00000428863 TRBV10-2A0A0K0K1G8 114 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 HIST1H2BKO60814 126 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 IGKCP01834 107 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 HIST1H2BJP06899 126 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 HIST1H2BOP23527 126 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 DDTP30046 118 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 HIST1H2BBP33778 126 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 HIST1H2BDP58876 126 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 HIST1H2BCP62807 126 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 HIST2H2BEQ16778 126 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.58□□□□□ -1.04
MDM2-215ENST00000428863 SOSTDC1Q6X4U4 206 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 HIST1H2BHQ93079 126 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 HIST1H2BNQ99877 126 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 HIST1H2BMQ99879 126 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 Q9BRP9 147 aa8.58□□□□□ -1.04
MDM2-215ENST00000428863 ADAMTSL4-AS1Q5T5F5 129 aa8.57□□□□□ -1.04
MDM2-215ENST00000428863 GAGE2AQ6NT46 116 aa8.57□□□□□ -1.04
MDM2-215ENST00000428863 LGALS3P17931 250 aaKnown RBP8.56□□□□□ -1.04
MDM2-215ENST00000428863 NMUP48645 174 aa8.56□□□□□ -1.04
MDM2-215ENST00000428863 HERVK_113P61574 105 aa8.56□□□□□ -1.04
MDM2-215ENST00000428863 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
MDM2-215ENST00000428863 LCE2AQ5TA79 106 aaPredicted RBP8.56□□□□□ -1.04
MDM2-215ENST00000428863 A0A0U1RQV1 116 aa8.55□□□□□ -1.04
MDM2-215ENST00000428863 IGLV6-57P01721 117 aa8.55□□□□□ -1.04
MDM2-215ENST00000428863 A0A0J9YXY3 114 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms