RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 C3orf22Q8N5N4 141 aa8.96□□□□□ -0.98
SEC13-210ENST00000428626 PLEKHB2Q96CS7 222 aa8.96□□□□□ -0.98
SEC13-210ENST00000428626 TMEM170BQ5T4T1 132 aa8.95□□□□□ -0.98
SEC13-210ENST00000428626 RPL24P83731 157 aaKnown RBP8.94□□□□□ -0.98
SEC13-210ENST00000428626 IGKV2D-26A0A0A0MRZ7 120 aa8.93□□□□□ -0.98
SEC13-210ENST00000428626 A0A0U1RRA0 63 aa8.92□□□□□ -0.98
SEC13-210ENST00000428626 LCE2AQ5TA79 106 aaPredicted RBP8.92□□□□□ -0.98
SEC13-210ENST00000428626 TMEM223A0PJW6 202 aa8.91□□□□□ -0.98
SEC13-210ENST00000428626 LINC00158P58513 81 aa8.91□□□□□ -0.98
SEC13-210ENST00000428626 CBLN2Q8IUK8 224 aa8.91□□□□□ -0.98
SEC13-210ENST00000428626 CHTOPQ9Y3Y2 248 aaKnown RBP8.91□□□□□ -0.98
SEC13-210ENST00000428626 HIGD2AQ9BW72 106 aa8.9□□□□□ -0.98
SEC13-210ENST00000428626 IGLV7-46A0A075B6I9 117 aa8.89□□□□□ -0.99
SEC13-210ENST00000428626 NDUFA5Q16718 116 aa8.89□□□□□ -0.99
SEC13-210ENST00000428626 TPRXLQ17RH7 258 aa8.89□□□□□ -0.99
SEC13-210ENST00000428626 YPEL4Q96NS1 127 aa8.89□□□□□ -0.99
SEC13-210ENST00000428626 SPRR4Q96PI1 79 aa8.89□□□□□ -0.99
SEC13-210ENST00000428626 APOC3P02656 99 aa8.88□□□□□ -0.99
SEC13-210ENST00000428626 SMIM13P0DJ93 91 aa8.88□□□□□ -0.99
SEC13-210ENST00000428626 SFTA2Q6UW10 78 aa8.88□□□□□ -0.99
SEC13-210ENST00000428626 A0A0U1RQV1 116 aa8.87□□□□□ -0.99
SEC13-210ENST00000428626 TRAV12-1A0A0B4J245 112 aa8.86□□□□□ -0.99
SEC13-210ENST00000428626 IFI27L1Q96BM0 104 aa8.86□□□□□ -0.99
SEC13-210ENST00000428626 CDIP1Q9H305 208 aa8.86□□□□□ -0.99
SEC13-210ENST00000428626 NCR3O14931 201 aa8.85□□□□□ -0.99
SEC13-210ENST00000428626 KRTAP4-16G5E9R7 235 aaPredicted RBP8.84□□□□□ -0.99
SEC13-210ENST00000428626 SPRR1AP35321 89 aa8.84□□□□□ -0.99
SEC13-210ENST00000428626 CTAG1AP78358 180 aa8.84□□□□□ -0.99
SEC13-210ENST00000428626 BOD1L2Q8IYS8 172 aa8.84□□□□□ -0.99
SEC13-210ENST00000428626 MIR7-3HGQ8N6C7 128 aa8.84□□□□□ -0.99
SEC13-210ENST00000428626 CHCHD1Q96BP2 118 aaKnown RBP8.84□□□□□ -0.99
SEC13-210ENST00000428626 KRTAP9-2Q9BYQ4 174 aa8.84□□□□□ -0.99
SEC13-210ENST00000428626 PPDPFQ9H3Y8 114 aa8.84□□□□□ -0.99
SEC13-210ENST00000428626 FAM19A2Q8N3H0 131 aa8.83□□□□□ -1
SEC13-210ENST00000428626 DAND5Q8N907 189 aa8.83□□□□□ -1
SEC13-210ENST00000428626 PRYO14603 147 aa8.82□□□□□ -1
SEC13-210ENST00000428626 SNAPINO95295 136 aa8.82□□□□□ -1
SEC13-210ENST00000428626 KCNQ1DNQ9H478 68 aa8.82□□□□□ -1
SEC13-210ENST00000428626 TSPEAR-AS2P59090 65 aa8.81□□□□□ -1
SEC13-210ENST00000428626 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
SEC13-210ENST00000428626 SVBPQ8N300 66 aa8.81□□□□□ -1
SEC13-210ENST00000428626 LINC00337Q8N6G1 96 aa8.81□□□□□ -1
SEC13-210ENST00000428626 SMCR5Q8TEV8 140 aa8.81□□□□□ -1
SEC13-210ENST00000428626 TRBV10-3A0A0K0K1G6 114 aa8.8□□□□□ -1
SEC13-210ENST00000428626 Q8NBF4 154 aa8.8□□□□□ -1
SEC13-210ENST00000428626 NDUFA12Q9UI09 145 aa8.8□□□□□ -1
SEC13-210ENST00000428626 LINC00310P59036 64 aa8.79□□□□□ -1
SEC13-210ENST00000428626 SPAG11AQ6PDA7 123 aa8.79□□□□□ -1
SEC13-210ENST00000428626 ATP6V1G1O75348 118 aa8.78□□□□□ -1
SEC13-210ENST00000428626 ERC2-IT1O76042 136 aa8.78□□□□□ -1
SEC13-210ENST00000428626 HERV-K104P63124 156 aa8.78□□□□□ -1
SEC13-210ENST00000428626 ZNF706Q9Y5V0 76 aaPredicted RBP8.78□□□□□ -1
SEC13-210ENST00000428626 KRTAP13-3Q3SY46 172 aa8.77□□□□□ -1.01
SEC13-210ENST00000428626 ETDCA0A1B0GVM5 59 aa8.76□□□□□ -1.01
SEC13-210ENST00000428626 H0Y8G0 127 aa8.76□□□□□ -1.01
SEC13-210ENST00000428626 HSBP1O75506 76 aa8.76□□□□□ -1.01
SEC13-210ENST00000428626 LINC00483Q53H64 154 aa8.76□□□□□ -1.01
SEC13-210ENST00000428626 MYMXA0A1B0GTQ4 84 aa8.75□□□□□ -1.01
SEC13-210ENST00000428626 B5MCH6 92 aa8.75□□□□□ -1.01
SEC13-210ENST00000428626 FP248Q71RG6 208 aaPredicted RBP8.75□□□□□ -1.01
SEC13-210ENST00000428626 LOC107984156A0A0G2JMH3 177 aa8.74□□□□□ -1.01
SEC13-210ENST00000428626 ARL17AQ8IVW1 177 aa8.74□□□□□ -1.01
SEC13-210ENST00000428626 SLC7A5P1Q8MH63 180 aa8.74□□□□□ -1.01
SEC13-210ENST00000428626 Q9BRP9 147 aa8.74□□□□□ -1.01
SEC13-210ENST00000428626 LEPROTO15243 131 aa8.73□□□□□ -1.01
SEC13-210ENST00000428626 TRGC2P03986 189 aa8.73□□□□□ -1.01
SEC13-210ENST00000428626 C4orf48Q5BLP8 95 aa8.73□□□□□ -1.01
SEC13-210ENST00000428626 GAGE2AQ6NT46 116 aa8.73□□□□□ -1.01
SEC13-210ENST00000428626 KRTAP4-1Q9BYQ7 146 aa8.73□□□□□ -1.01
SEC13-210ENST00000428626 SERF1AO75920 110 aa8.72□□□□□ -1.01
SEC13-210ENST00000428626 S100A1P23297 94 aa8.72□□□□□ -1.01
SEC13-210ENST00000428626 PMCHL2Q9BQD1 86 aa8.72□□□□□ -1.01
SEC13-210ENST00000428626 LINC00587B1AMM8 73 aa8.71□□□□□ -1.02
SEC13-210ENST00000428626 EIF4EBP3O60516 100 aaPredicted RBP8.71□□□□□ -1.02
SEC13-210ENST00000428626 DDTP30046 118 aa8.71□□□□□ -1.02
SEC13-210ENST00000428626 MAP1LC3CQ9BXW4 147 aa8.71□□□□□ -1.02
SEC13-210ENST00000428626 IGLV9-49A0A0B4J1Y8 123 aa8.7□□□□□ -1.02
SEC13-210ENST00000428626 J3QQQ9 107 aa8.7□□□□□ -1.02
SEC13-210ENST00000428626 LEPROTL1O95214 131 aa8.7□□□□□ -1.02
SEC13-210ENST00000428626 SPINK1P00995 79 aa8.7□□□□□ -1.02
SEC13-210ENST00000428626 MOBPQ13875 183 aa8.7□□□□□ -1.02
SEC13-210ENST00000428626 TRBV10-2A0A0K0K1G8 114 aa8.69□□□□□ -1.02
SEC13-210ENST00000428626 SOSTDC1Q6X4U4 206 aa8.69□□□□□ -1.02
SEC13-210ENST00000428626 ASB16-AS1Q495Z4 193 aa8.68□□□□□ -1.02
SEC13-210ENST00000428626 Q6ZRX8 168 aa8.68□□□□□ -1.02
SEC13-210ENST00000428626 Q8N377 158 aa8.68□□□□□ -1.02
SEC13-210ENST00000428626 IGLV6-57P01721 117 aa8.67□□□□□ -1.02
SEC13-210ENST00000428626 FABP4P15090 132 aa8.67□□□□□ -1.02
SEC13-210ENST00000428626 PLNP26678 52 aa8.67□□□□□ -1.02
SEC13-210ENST00000428626 DPM2O94777 84 aa8.66□□□□□ -1.02
SEC13-210ENST00000428626 ADAMTSL4-AS1Q5T5F5 129 aa8.66□□□□□ -1.02
SEC13-210ENST00000428626 SPANXB1Q9NS25 103 aaPredicted RBP8.66□□□□□ -1.02
SEC13-210ENST00000428626 NPC2P61916 151 aa8.65□□□□□ -1.02
SEC13-210ENST00000428626 SSBP3-AS1Q7Z2R9 100 aa8.65□□□□□ -1.02
SEC13-210ENST00000428626 NDUFC2O95298 119 aa8.64□□□□□ -1.03
SEC13-210ENST00000428626 IGKCP01834 107 aa8.64□□□□□ -1.03
SEC13-210ENST00000428626 S100A12P80511 92 aa8.64□□□□□ -1.03
SEC13-210ENST00000428626 LGALS3P17931 250 aaKnown RBP8.63□□□□□ -1.03
SEC13-210ENST00000428626 NMUP48645 174 aa8.63□□□□□ -1.03
SEC13-210ENST00000428626 RPS29P62273 56 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 1104.9 ms