RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 PSENENQ9NZ42 101 aa2.07□□□□□ -2.08
CCDC30-203ENST00000428554 SNRNP200O75643 2136 aaKnown RBP2.07□□□□□ -2.08
CCDC30-203ENST00000428554 DUOX1Q9NRD9 1551 aa2.07□□□□□ -2.08
CCDC30-203ENST00000428554 MED13Q9UHV7 2174 aa2.07□□□□□ -2.08
CCDC30-203ENST00000428554 PROK2Q9HC23 129 aa2.07□□□□□ -2.08
CCDC30-203ENST00000428554 NUMA1Q14980 2115 aa2.07□□□□□ -2.08
CCDC30-203ENST00000428554 IGKV3-7A0A075B6H7 116 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 HMGN4O00479 90 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 IFI27P40305 119 aaPredicted RBP2.06□□□□□ -2.08
CCDC30-203ENST00000428554 CLECL1Q8IZS7 167 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 LINC00612Q8N6U2 182 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 MAPK1IP1LQ8NDC0 245 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 R4GN34 69 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 TNRC6BQ9UPQ9 1833 aaKnown RBP2.06□□□□□ -2.08
CCDC30-203ENST00000428554 ANKRD36A6QL64 1941 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 MICAL3Q7RTP6 2002 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 ZNF815PA8K554 130 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 MRGPRG-AS1Q2M3A8 158 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 CRCT1Q9UGL9 99 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 HILPDAQ9Y5L2 63 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 SIP14410 1827 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 DOCK11Q5JSL3 2073 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 KRTAP10-9P60411 292 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 PLAC8Q9NZF1 115 aa2.06□□□□□ -2.08
CCDC30-203ENST00000428554 ZNF236Q9UL36 1845 aa2.05□□□□□ -2.08
CCDC30-203ENST00000428554 MYOFQ9NZM1 2061 aa2.05□□□□□ -2.08
CCDC30-203ENST00000428554 FXYD6-FXYD2A0A087WZ82 144 aa2.05□□□□□ -2.08
CCDC30-203ENST00000428554 PATE1Q8WXA2 126 aa2.05□□□□□ -2.08
CCDC30-203ENST00000428554 ARMS2P0C7Q2 107 aa2.05□□□□□ -2.08
CCDC30-203ENST00000428554 Q6ZTI0 123 aa2.05□□□□□ -2.08
CCDC30-203ENST00000428554 KRTAP2-2Q9BYT5 123 aa2.05□□□□□ -2.08
CCDC30-203ENST00000428554 TRBV7-4A0A0J9YYF1 115 aa2.04□□□□□ -2.08
CCDC30-203ENST00000428554 PRB4P10163 310 aaPredicted RBP2.04□□□□□ -2.08
CCDC30-203ENST00000428554 GFRA4Q9GZZ7 299 aa2.04□□□□□ -2.08
CCDC30-203ENST00000428554 MAP1AP78559 2803 aaPredicted RBP2.04□□□□□ -2.08
CCDC30-203ENST00000428554 ANK2Q01484 3957 aa2.04□□□□□ -2.08
CCDC30-203ENST00000428554 FXYD6Q9H0Q3 95 aa2.04□□□□□ -2.08
CCDC30-203ENST00000428554 MRPL36Q9P0J6 103 aaKnown RBP2.04□□□□□ -2.08
CCDC30-203ENST00000428554 DOCK9Q9BZ29 2069 aa2.04□□□□□ -2.08
CCDC30-203ENST00000428554 SVEP1Q4LDE5 3571 aa2.04□□□□□ -2.08
CCDC30-203ENST00000428554 FAM74A4Q5TZK3 123 aa2.04□□□□□ -2.08
CCDC30-203ENST00000428554 HMGA1P17096 107 aaKnown RBP2.03□□□□□ -2.08
CCDC30-203ENST00000428554 PYDC2Q56P42 97 aa2.03□□□□□ -2.08
CCDC30-203ENST00000428554 ORMDL1Q9P0S3 153 aa2.03□□□□□ -2.08
CCDC30-203ENST00000428554 CR1P17927 2039 aa2.03□□□□□ -2.08
CCDC30-203ENST00000428554 A0A1W2PNU3 283 aaPredicted RBP2.03□□□□□ -2.08
CCDC30-203ENST00000428554 LY6EQ16553 131 aa2.03□□□□□ -2.08
CCDC30-203ENST00000428554 HCP5Q6MZN7 132 aa2.03□□□□□ -2.08
CCDC30-203ENST00000428554 BAGE3Q86Y29 109 aa2.03□□□□□ -2.08
CCDC30-203ENST00000428554 BAGE2Q86Y30 109 aa2.03□□□□□ -2.08
CCDC30-203ENST00000428554 IGKV1-17P01599 117 aa2.02□□□□□ -2.09
CCDC30-203ENST00000428554 MDKP21741 143 aaPredicted RBP2.02□□□□□ -2.09
CCDC30-203ENST00000428554 CCL26Q9Y258 94 aa2.02□□□□□ -2.09
CCDC30-203ENST00000428554 ARL2-SNX15V9GYD0 113 aa2.02□□□□□ -2.09
CCDC30-203ENST00000428554 TFF1P04155 84 aa2.02□□□□□ -2.09
CCDC30-203ENST00000428554 SSBP1Q04837 148 aaKnown RBP2.02□□□□□ -2.09
CCDC30-203ENST00000428554 ZNF563Q8TA94 476 aa2.02□□□□□ -2.09
CCDC30-203ENST00000428554 VPS13CQ709C8 3753 aa2.02□□□□□ -2.09
CCDC30-203ENST00000428554 ARHGAP32A7KAX9 2087 aa2.02□□□□□ -2.09
CCDC30-203ENST00000428554 CTSGP08311 255 aa2.02□□□□□ -2.09
CCDC30-203ENST00000428554 CCL3L1P16619 93 aa2.02□□□□□ -2.09
CCDC30-203ENST00000428554 PDE6GP18545 87 aa2.02□□□□□ -2.09
CCDC30-203ENST00000428554 MT3P25713 68 aa2.02□□□□□ -2.09
CCDC30-203ENST00000428554 ATXN8Q156A1 80 aa2.01□□□□□ -2.09
CCDC30-203ENST00000428554 LINC00846Q9NV44 126 aa2.01□□□□□ -2.09
CCDC30-203ENST00000428554 MPDZO75970 2070 aa2.01□□□□□ -2.09
CCDC30-203ENST00000428554 IGKV3D-15A0A087WSY6 115 aa2□□□□□ -2.09
CCDC30-203ENST00000428554 TRBV6-5A0A0K0K1A5 114 aa2□□□□□ -2.09
CCDC30-203ENST00000428554 FAT4Q6V0I7 4981 aa2□□□□□ -2.09
CCDC30-203ENST00000428554 GAS8-AS1O95177 125 aa2□□□□□ -2.09
CCDC30-203ENST00000428554 LEPROTL1O95214 131 aa2□□□□□ -2.09
CCDC30-203ENST00000428554 CCL18P55774 89 aa2□□□□□ -2.09
CCDC30-203ENST00000428554 TPRXLQ17RH7 258 aa2□□□□□ -2.09
CCDC30-203ENST00000428554 SFTA2Q6UW10 78 aa2□□□□□ -2.09
CCDC30-203ENST00000428554 LINC01558Q9Y6Z2 57 aa2□□□□□ -2.09
CCDC30-203ENST00000428554 ADAMTS9Q9P2N4 1935 aa2□□□□□ -2.09
CCDC30-203ENST00000428554 SDK1Q7Z5N4 2213 aa2□□□□□ -2.09
CCDC30-203ENST00000428554 HRES1P13985 223 aa1.99□□□□□ -2.09
CCDC30-203ENST00000428554 SPAG11BQ08648 103 aa1.99□□□□□ -2.09
CCDC30-203ENST00000428554 SPAG11AQ6PDA7 123 aa1.99□□□□□ -2.09
CCDC30-203ENST00000428554 COL4A2P08572 1712 aa1.99□□□□□ -2.09
CCDC30-203ENST00000428554 TRAV40A0A0B4J280 105 aa1.99□□□□□ -2.09
CCDC30-203ENST00000428554 IGLV3-1P01715 115 aa1.99□□□□□ -2.09
CCDC30-203ENST00000428554 FREM3P0C091 2139 aa1.99□□□□□ -2.09
CCDC30-203ENST00000428554 ZGRF1Q86YA3 2104 aa1.99□□□□□ -2.09
CCDC30-203ENST00000428554 TTTY12Q9BZ98 90 aa1.99□□□□□ -2.09
CCDC30-203ENST00000428554 NUP214P35658 2090 aaPredicted RBP1.99□□□□□ -2.09
CCDC30-203ENST00000428554 PPP1R17O96001 155 aa1.99□□□□□ -2.09
CCDC30-203ENST00000428554 FAM103A1Q9BTL3 118 aaKnown RBP1.99□□□□□ -2.09
CCDC30-203ENST00000428554 IGKV3D-7A0A0C4DH55 119 aa1.98□□□□□ -2.09
CCDC30-203ENST00000428554 IGKV3OR2-268A0A0C4DH90 116 aa1.98□□□□□ -2.09
CCDC30-203ENST00000428554 LCE6AA0A183 80 aa1.98□□□□□ -2.09
CCDC30-203ENST00000428554 TRBV6-4A0A1B0GX49 114 aa1.98□□□□□ -2.09
CCDC30-203ENST00000428554 A0A1W2PNN7 141 aa1.98□□□□□ -2.09
CCDC30-203ENST00000428554 D6R8Y8 96 aa1.98□□□□□ -2.09
CCDC30-203ENST00000428554 MUSTN1Q8IVN3 82 aa1.98□□□□□ -2.09
CCDC30-203ENST00000428554 DEFB124Q8NES8 71 aa1.98□□□□□ -2.09
CCDC30-203ENST00000428554 PRKDCP78527 4128 aaKnown RBP1.98□□□□□ -2.09
CCDC30-203ENST00000428554 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
CCDC30-203ENST00000428554 SPRR4Q96PI1 79 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms