RNA–Protein interactions for RNA: ENST00000427688.5

CHL1-204, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 4

Gene CHL1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-204ENST00000427688 MAP1LC3CQ9BXW4 147 aa12.74□□□□□ -0.37
CHL1-204ENST00000427688 HERVK_113P61574 105 aa12.73□□□□□ -0.37
CHL1-204ENST00000427688 DPM2O94777 84 aa12.72□□□□□ -0.37
CHL1-204ENST00000427688 HERV-K104P63124 156 aa12.72□□□□□ -0.37
CHL1-204ENST00000427688 NDUFA12Q9UI09 145 aa12.72□□□□□ -0.37
CHL1-204ENST00000427688 MYMXA0A1B0GTQ4 84 aa12.71□□□□□ -0.37
CHL1-204ENST00000427688 SMIM13P0DJ93 91 aa12.71□□□□□ -0.37
CHL1-204ENST00000427688 VPREB1P12018 145 aa12.71□□□□□ -0.37
CHL1-204ENST00000427688 UBE2AP49459 152 aa12.71□□□□□ -0.37
CHL1-204ENST00000427688 PRR26Q8N8Z3 221 aa12.71□□□□□ -0.37
CHL1-204ENST00000427688 PMCHL2Q9BQD1 86 aa12.71□□□□□ -0.37
CHL1-204ENST00000427688 LINC00587B1AMM8 73 aa12.7□□□□□ -0.38
CHL1-204ENST00000427688 HIST1H2BKO60814 126 aa12.69□□□□□ -0.38
CHL1-204ENST00000427688 IGKCP01834 107 aa12.69□□□□□ -0.38
CHL1-204ENST00000427688 HIST1H2BJP06899 126 aa12.69□□□□□ -0.38
CHL1-204ENST00000427688 HIST1H2BOP23527 126 aa12.69□□□□□ -0.38
CHL1-204ENST00000427688 HIST1H2BBP33778 126 aa12.69□□□□□ -0.38
CHL1-204ENST00000427688 HIST1H2BDP58876 126 aa12.69□□□□□ -0.38
CHL1-204ENST00000427688 HIST1H2BCP62807 126 aa12.69□□□□□ -0.38
CHL1-204ENST00000427688 HIST2H2BEQ16778 126 aa12.69□□□□□ -0.38
CHL1-204ENST00000427688 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.69□□□□□ -0.38
CHL1-204ENST00000427688 HIST1H2BHQ93079 126 aa12.69□□□□□ -0.38
CHL1-204ENST00000427688 PLEKHB2Q96CS7 222 aa12.69□□□□□ -0.38
CHL1-204ENST00000427688 HIST1H2BNQ99877 126 aa12.69□□□□□ -0.38
CHL1-204ENST00000427688 HIST1H2BMQ99879 126 aa12.69□□□□□ -0.38
CHL1-204ENST00000427688 IGLV1-50A0A075B6I6 118 aa12.68□□□□□ -0.38
CHL1-204ENST00000427688 LEPROTO15243 131 aa12.68□□□□□ -0.38
CHL1-204ENST00000427688 MIR7-3HGQ8N6C7 128 aa12.66□□□□□ -0.38
CHL1-204ENST00000427688 LGALS3P17931 250 aaKnown RBP12.65□□□□□ -0.38
CHL1-204ENST00000427688 RPL13AP40429 203 aaKnown RBP12.65□□□□□ -0.38
CHL1-204ENST00000427688 J3QQQ9 107 aa12.64□□□□□ -0.39
CHL1-204ENST00000427688 KRTAP1-4P0C5Y4 121 aa12.64□□□□□ -0.39
CHL1-204ENST00000427688 BOD1L2Q8IYS8 172 aa12.64□□□□□ -0.39
CHL1-204ENST00000427688 TSPEAR-AS2P59090 65 aa12.63□□□□□ -0.39
CHL1-204ENST00000427688 FAM19A1Q7Z5A9 133 aa12.63□□□□□ -0.39
CHL1-204ENST00000427688 TMEM238C9JI98 176 aa12.62□□□□□ -0.39
CHL1-204ENST00000427688 Q8NDZ9 215 aa12.62□□□□□ -0.39
CHL1-204ENST00000427688 TMEM126AQ9H061 195 aa12.62□□□□□ -0.39
CHL1-204ENST00000427688 M0R378 163 aa12.61□□□□□ -0.39
CHL1-204ENST00000427688 NMUP48645 174 aa12.61□□□□□ -0.39
CHL1-204ENST00000427688 SYS1-DBNDD2H3BUS1 97 aa12.6□□□□□ -0.39
CHL1-204ENST00000427688 NCR3O14931 201 aa12.6□□□□□ -0.39
CHL1-204ENST00000427688 PRLHP81277 87 aa12.59□□□□□ -0.39
CHL1-204ENST00000427688 MIEN1Q9BRT3 115 aa12.58□□□□□ -0.4
CHL1-204ENST00000427688 DAND5Q8N907 189 aa12.57□□□□□ -0.4
CHL1-204ENST00000427688 KRTAP13-1Q8IUC0 172 aa12.56□□□□□ -0.4
CHL1-204ENST00000427688 S100A12P80511 92 aa12.55□□□□□ -0.4
CHL1-204ENST00000427688 IGKV2D-26A0A0A0MRZ7 120 aa12.54□□□□□ -0.4
CHL1-204ENST00000427688 E9PLD3 99 aa12.54□□□□□ -0.4
CHL1-204ENST00000427688 CRYGAP11844 174 aa12.54□□□□□ -0.4
CHL1-204ENST00000427688 PET117Q6UWS5 81 aa12.54□□□□□ -0.4
CHL1-204ENST00000427688 PRYO14603 147 aa12.52□□□□□ -0.41
CHL1-204ENST00000427688 KRTDAPP60985 99 aa12.52□□□□□ -0.41
CHL1-204ENST00000427688 LINC01545Q5VT33 79 aa12.52□□□□□ -0.41
CHL1-204ENST00000427688 TYMSOSQ8TAI1 123 aa12.51□□□□□ -0.41
CHL1-204ENST00000427688 HIGD2AQ9BW72 106 aa12.51□□□□□ -0.41
CHL1-204ENST00000427688 ANAPC11Q9NYG5 84 aa12.5□□□□□ -0.41
CHL1-204ENST00000427688 A0A087X002 238 aa12.49□□□□□ -0.41
CHL1-204ENST00000427688 C3orf79P0CE67 100 aa12.49□□□□□ -0.41
CHL1-204ENST00000427688 COA6Q5JTJ3 125 aaKnown RBP12.49□□□□□ -0.41
CHL1-204ENST00000427688 A0A0J9YXY3 114 aa12.48□□□□□ -0.41
CHL1-204ENST00000427688 ETDCA0A1B0GVM5 59 aa12.48□□□□□ -0.41
CHL1-204ENST00000427688 C20orf202A1L168 122 aa12.48□□□□□ -0.41
CHL1-204ENST00000427688 UBR4Q5T4S7 5183 aa12.47□□□□□ -0.41
CHL1-204ENST00000427688 TRBV10-3A0A0K0K1G6 114 aa12.47□□□□□ -0.41
CHL1-204ENST00000427688 NPC2P61916 151 aa12.47□□□□□ -0.41
CHL1-204ENST00000427688 S100A1P23297 94 aa12.46□□□□□ -0.41
CHL1-204ENST00000427688 FAM229BQ4G0N7 80 aa12.46□□□□□ -0.41
CHL1-204ENST00000427688 SPANXB1Q9NS25 103 aaPredicted RBP12.46□□□□□ -0.41
CHL1-204ENST00000427688 LOC107984156A0A0G2JMH3 177 aa12.45□□□□□ -0.42
CHL1-204ENST00000427688 DDTP30046 118 aa12.45□□□□□ -0.42
CHL1-204ENST00000427688 S100A7L2Q5SY68 101 aa12.45□□□□□ -0.42
CHL1-204ENST00000427688 ARL17AQ8IVW1 177 aa12.45□□□□□ -0.42
CHL1-204ENST00000427688 KCNQ1DNQ9H478 68 aa12.45□□□□□ -0.42
CHL1-204ENST00000427688 TRBV10-2A0A0K0K1G8 114 aa12.44□□□□□ -0.42
CHL1-204ENST00000427688 ZNF815PA8K554 130 aa12.44□□□□□ -0.42
CHL1-204ENST00000427688 LINC00337Q8N6G1 96 aa12.44□□□□□ -0.42
CHL1-204ENST00000427688 TSPAN13O95857 204 aa12.43□□□□□ -0.42
CHL1-204ENST00000427688 NDUFC2O95298 119 aa12.42□□□□□ -0.42
CHL1-204ENST00000427688 ADAMTSL4-AS1Q5T5F5 129 aa12.42□□□□□ -0.42
CHL1-204ENST00000427688 ZNF706Q9Y5V0 76 aaPredicted RBP12.42□□□□□ -0.42
CHL1-204ENST00000427688 LRP2P98164 4655 aa12.4□□□□□ -0.42
CHL1-204ENST00000427688 SPRR1AP35321 89 aa12.39□□□□□ -0.43
CHL1-204ENST00000427688 TIMM17BO60830 172 aa12.38□□□□□ -0.43
CHL1-204ENST00000427688 PRR4Q16378 134 aa12.38□□□□□ -0.43
CHL1-204ENST00000427688 KRTAP13-2Q52LG2 175 aa12.38□□□□□ -0.43
CHL1-204ENST00000427688 SOSTDC1Q6X4U4 206 aa12.38□□□□□ -0.43
CHL1-204ENST00000427688 S100A2P29034 98 aa12.37□□□□□ -0.43
CHL1-204ENST00000427688 AKR1D1P51857 326 aa12.37□□□□□ -0.43
CHL1-204ENST00000427688 SCGB1D4Q6XE38 83 aa12.36□□□□□ -0.43
CHL1-204ENST00000427688 ATOH7Q8N100 152 aa12.36□□□□□ -0.43
CHL1-204ENST00000427688 SMCR5Q8TEV8 140 aa12.36□□□□□ -0.43
CHL1-204ENST00000427688 SPRR4Q96PI1 79 aa12.36□□□□□ -0.43
CHL1-204ENST00000427688 TTTY13Q9BZ97 58 aa12.36□□□□□ -0.43
CHL1-204ENST00000427688 TRAV23DV6A0A075B6W5 121 aa12.35□□□□□ -0.43
CHL1-204ENST00000427688 LINC00304Q8N9R0 145 aa12.35□□□□□ -0.43
CHL1-204ENST00000427688 LINC00308Q8TCZ7 52 aa12.35□□□□□ -0.43
CHL1-204ENST00000427688 CBY1Q9Y3M2 126 aa12.35□□□□□ -0.43
CHL1-204ENST00000427688 KRTAP4-16G5E9R7 235 aaPredicted RBP12.34□□□□□ -0.43
CHL1-204ENST00000427688 EIF4EBP3O60516 100 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms