RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 CDKN2A-AS1Q9UH64 79 aa8.53□□□□□ -1.04
SNX3-204ENST00000426155 A0A1W2PNN7 141 aa8.52□□□□□ -1.05
SNX3-204ENST00000426155 C9orf118A6NHY6 69 aa8.52□□□□□ -1.05
SNX3-204ENST00000426155 PAPPA-AS1Q5QFB9 102 aa8.52□□□□□ -1.05
SNX3-204ENST00000426155 C7orf33Q8WU49 177 aa8.52□□□□□ -1.05
SNX3-204ENST00000426155 TOMM7Q9P0U1 55 aa8.52□□□□□ -1.05
SNX3-204ENST00000426155 H0Y8G0 127 aa8.51□□□□□ -1.05
SNX3-204ENST00000426155 HERVK_113P63121 156 aa8.51□□□□□ -1.05
SNX3-204ENST00000426155 C21orf62-AS1Q17RA5 79 aa8.51□□□□□ -1.05
SNX3-204ENST00000426155 Q6ZRP5 223 aa8.51□□□□□ -1.05
SNX3-204ENST00000426155 KRTAP29-1A8MX34 341 aaPredicted RBP8.5□□□□□ -1.05
SNX3-204ENST00000426155 C9orf116Q5BN46 136 aaPredicted RBP8.5□□□□□ -1.05
SNX3-204ENST00000426155 BOD1L2Q8IYS8 172 aa8.5□□□□□ -1.05
SNX3-204ENST00000426155 LINC01561Q8N1V8 128 aa8.5□□□□□ -1.05
SNX3-204ENST00000426155 IFI27L1Q96BM0 104 aa8.5□□□□□ -1.05
SNX3-204ENST00000426155 GEMIN7Q9H840 131 aaKnown RBP8.5□□□□□ -1.05
SNX3-204ENST00000426155 FAM168BA1KXE4 195 aa8.49□□□□□ -1.05
SNX3-204ENST00000426155 F8WDY8 70 aa8.49□□□□□ -1.05
SNX3-204ENST00000426155 ATP5LO75964 103 aa8.49□□□□□ -1.05
SNX3-204ENST00000426155 PRR3P79522 188 aaKnown RBP8.49□□□□□ -1.05
SNX3-204ENST00000426155 C2orf91Q6ZV80 131 aa8.49□□□□□ -1.05
SNX3-204ENST00000426155 SMIM1B2RUZ4 78 aa8.48□□□□□ -1.05
SNX3-204ENST00000426155 PRSS2P07478 247 aa8.48□□□□□ -1.05
SNX3-204ENST00000426155 GAGE2EQ4V326 116 aa8.48□□□□□ -1.05
SNX3-204ENST00000426155 Q6ZVH6 145 aa8.48□□□□□ -1.05
SNX3-204ENST00000426155 HIGD1BQ9P298 99 aa8.48□□□□□ -1.05
SNX3-204ENST00000426155 GAGE2DQ9UEU5 116 aa8.48□□□□□ -1.05
SNX3-204ENST00000426155 TINCRA0A1B0GVN0 87 aa8.47□□□□□ -1.05
SNX3-204ENST00000426155 LINC01549A6NIU2 74 aa8.47□□□□□ -1.05
SNX3-204ENST00000426155 K7EP34 96 aa8.47□□□□□ -1.05
SNX3-204ENST00000426155 TLX1NBP0CAT3 122 aa8.47□□□□□ -1.05
SNX3-204ENST00000426155 SMIM13P0DJ93 91 aa8.47□□□□□ -1.05
SNX3-204ENST00000426155 PMVKQ15126 192 aa8.47□□□□□ -1.05
SNX3-204ENST00000426155 PHF5AQ7RTV0 110 aaKnown RBP8.47□□□□□ -1.05
SNX3-204ENST00000426155 Q8IZM0 81 aa8.47□□□□□ -1.05
SNX3-204ENST00000426155 KRTAP4-12Q9BQ66 201 aa8.47□□□□□ -1.05
SNX3-204ENST00000426155 IGLV5-45A0A087WSX0 123 aa8.46□□□□□ -1.06
SNX3-204ENST00000426155 TRBV30A0A0K0K1B3 111 aa8.46□□□□□ -1.06
SNX3-204ENST00000426155 SPINK8P0C7L1 97 aa8.46□□□□□ -1.06
SNX3-204ENST00000426155 C6orf226Q5I0X4 101 aa8.46□□□□□ -1.06
SNX3-204ENST00000426155 FAM19A5Q7Z5A7 132 aaPredicted RBP8.46□□□□□ -1.06
SNX3-204ENST00000426155 FABP2P12104 132 aa8.45□□□□□ -1.06
SNX3-204ENST00000426155 CKS1BP61024 79 aa8.45□□□□□ -1.06
SNX3-204ENST00000426155 KRTAP7-1Q8IUC3 87 aa8.45□□□□□ -1.06
SNX3-204ENST00000426155 NDUFC2-KCTD14E9PQ53 114 aa8.44□□□□□ -1.06
SNX3-204ENST00000426155 TAL2Q16559 108 aa8.44□□□□□ -1.06
SNX3-204ENST00000426155 C9orf129Q5T035 196 aaKnown RBP8.44□□□□□ -1.06
SNX3-204ENST00000426155 J3QR89 54 aa8.43□□□□□ -1.06
SNX3-204ENST00000426155 OXTP01178 125 aa8.43□□□□□ -1.06
SNX3-204ENST00000426155 KRTAP11-1Q8IUC1 163 aa8.43□□□□□ -1.06
SNX3-204ENST00000426155 TNXBP22105 4242 aa8.42□□□□□ -1.06
SNX3-204ENST00000426155 A0A1W2PPM0 123 aa8.42□□□□□ -1.06
SNX3-204ENST00000426155 F8VRH5 84 aa8.42□□□□□ -1.06
SNX3-204ENST00000426155 H3BUT2 72 aa8.42□□□□□ -1.06
SNX3-204ENST00000426155 DPM2O94777 84 aa8.42□□□□□ -1.06
SNX3-204ENST00000426155 IGKCP01834 107 aa8.42□□□□□ -1.06
SNX3-204ENST00000426155 NMUP48645 174 aa8.42□□□□□ -1.06
SNX3-204ENST00000426155 COX7B2Q8TF08 81 aa8.42□□□□□ -1.06
SNX3-204ENST00000426155 SPCS1Q9Y6A9 102 aa8.42□□□□□ -1.06
SNX3-204ENST00000426155 ZNF22P17026 224 aaPredicted RBP8.41□□□□□ -1.06
SNX3-204ENST00000426155 XAGE1AQ9HD64 81 aa8.41□□□□□ -1.06
SNX3-204ENST00000426155 PSORS1C2Q9UIG4 136 aa8.41□□□□□ -1.06
SNX3-204ENST00000426155 C11orf86A6NJI1 115 aa8.39□□□□□ -1.07
SNX3-204ENST00000426155 M0QXV9 152 aa8.39□□□□□ -1.07
SNX3-204ENST00000426155 MT1HL1P0DM35 61 aa8.39□□□□□ -1.07
SNX3-204ENST00000426155 SERTAD4-AS1Q5TG53 156 aa8.39□□□□□ -1.07
SNX3-204ENST00000426155 HMCN2Q8NDA2 5059 aa8.39□□□□□ -1.07
SNX3-204ENST00000426155 SCGB1A1P11684 91 aa8.38□□□□□ -1.07
SNX3-204ENST00000426155 PLNP26678 52 aa8.38□□□□□ -1.07
SNX3-204ENST00000426155 CXCL5P42830 114 aa8.38□□□□□ -1.07
SNX3-204ENST00000426155 ODF1Q14990 250 aa8.38□□□□□ -1.07
SNX3-204ENST00000426155 IGLV5-39A0A0G2JS06 123 aa8.37□□□□□ -1.07
SNX3-204ENST00000426155 C1orf137Q5JT78 98 aa8.37□□□□□ -1.07
SNX3-204ENST00000426155 KRTAP19-1Q8IUB9 90 aa8.37□□□□□ -1.07
SNX3-204ENST00000426155 RAB37Q96AX2 223 aa8.37□□□□□ -1.07
SNX3-204ENST00000426155 TP73-AS1Q9UF72 201 aa8.37□□□□□ -1.07
SNX3-204ENST00000426155 F8W1H4 67 aa8.36□□□□□ -1.07
SNX3-204ENST00000426155 SRSF9Q13242 221 aaKnown RBP eCLIP8.36□□□□□ -1.07
SNX3-204ENST00000426155 TMEM170BQ5T4T1 132 aa8.36□□□□□ -1.07
SNX3-204ENST00000426155 CEND1Q8N111 149 aa8.36□□□□□ -1.07
SNX3-204ENST00000426155 CHTOPQ9Y3Y2 248 aaKnown RBP8.36□□□□□ -1.07
SNX3-204ENST00000426155 TRAV12-1A0A0B4J245 112 aa8.35□□□□□ -1.07
SNX3-204ENST00000426155 UBE2BP63146 152 aa8.35□□□□□ -1.07
SNX3-204ENST00000426155 SPINK6Q6UWN8 80 aa8.35□□□□□ -1.07
SNX3-204ENST00000426155 PCP2Q8IVA1 136 aa8.35□□□□□ -1.07
SNX3-204ENST00000426155 LCE3BQ5TA77 95 aa8.34□□□□□ -1.07
SNX3-204ENST00000426155 TMEM238LA0A1B0GVL6 79 aa8.33□□□□□ -1.08
SNX3-204ENST00000426155 LYRM7Q5U5X0 104 aa8.33□□□□□ -1.08
SNX3-204ENST00000426155 C22orf24Q9Y442 160 aa8.33□□□□□ -1.08
SNX3-204ENST00000426155 IGLV7-43P04211 117 aa8.32□□□□□ -1.08
SNX3-204ENST00000426155 PFN2P35080 140 aa8.32□□□□□ -1.08
SNX3-204ENST00000426155 RPL24P83731 157 aaKnown RBP8.32□□□□□ -1.08
SNX3-204ENST00000426155 ZNF625Q96I27 306 aaPredicted RBP8.32□□□□□ -1.08
SNX3-204ENST00000426155 E9PLD3 99 aa8.31□□□□□ -1.08
SNX3-204ENST00000426155 LINC01600Q96MT4 127 aa8.31□□□□□ -1.08
SNX3-204ENST00000426155 HIST1H4GQ99525 98 aa8.31□□□□□ -1.08
SNX3-204ENST00000426155 TMEM223A0PJW6 202 aa8.3□□□□□ -1.08
SNX3-204ENST00000426155 TMEM238C9JI98 176 aa8.3□□□□□ -1.08
SNX3-204ENST00000426155 SIGMAR1Q99720 223 aa8.3□□□□□ -1.08
SNX3-204ENST00000426155 NHP2Q9NX24 153 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms