RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 S100A12P80511 92 aa15.18■□□□□ 0.02
APOE-202ENST00000425718 HAMPP81172 84 aa15.18■□□□□ 0.02
APOE-202ENST00000425718 LBHQ53QV2 105 aaPredicted RBP15.18■□□□□ 0.02
APOE-202ENST00000425718 Q6ZVH6 145 aa15.18■□□□□ 0.02
APOE-202ENST00000425718 ARL17AQ8IVW1 177 aa15.18■□□□□ 0.02
APOE-202ENST00000425718 NKAPP1Q8N9T2 125 aa15.17■□□□□ 0.02
APOE-202ENST00000425718 IGLV5-37A0A075B6J1 123 aa15.16■□□□□ 0.02
APOE-202ENST00000425718 M0QXV9 152 aa15.16■□□□□ 0.02
APOE-202ENST00000425718 DLEU1O43261 78 aa15.16■□□□□ 0.02
APOE-202ENST00000425718 FAM168BA1KXE4 195 aa15.15■□□□□ 0.02
APOE-202ENST00000425718 FAM229AH3BQW9 127 aa15.15■□□□□ 0.02
APOE-202ENST00000425718 BOD1L2Q8IYS8 172 aa15.14■□□□□ 0.01
APOE-202ENST00000425718 SPANXDQ9BXN6 97 aa15.14■□□□□ 0.01
APOE-202ENST00000425718 SPANXCQ9NY87 97 aa15.14■□□□□ 0.01
APOE-202ENST00000425718 IFITM1P13164 125 aa15.12■□□□□ 0.01
APOE-202ENST00000425718 SERTAD4-AS1Q5TG53 156 aa15.12■□□□□ 0.01
APOE-202ENST00000425718 LINC00528Q8N1L1 170 aa15.12■□□□□ 0.01
APOE-202ENST00000425718 DAND5Q8N907 189 aa15.12■□□□□ 0.01
APOE-202ENST00000425718 LITAFQ99732 161 aa15.12■□□□□ 0.01
APOE-202ENST00000425718 PPDPFQ9H3Y8 114 aa15.12■□□□□ 0.01
APOE-202ENST00000425718 C22orf24Q9Y442 160 aa15.12■□□□□ 0.01
APOE-202ENST00000425718 RYR1P21817 5038 aa15.12■□□□□ 0.01
APOE-202ENST00000425718 SMIM6P0DI80 62 aa15.11■□□□□ 0.01
APOE-202ENST00000425718 MRPL55Q7Z7F7 128 aaKnown RBP15.11■□□□□ 0.01
APOE-202ENST00000425718 HSPG2P98160 4391 aa15.1■□□□□ 0.01
APOE-202ENST00000425718 PLA2G1BP04054 148 aaKnown RBP15.1■□□□□ 0.01
APOE-202ENST00000425718 VPREB1P12018 145 aa15.1■□□□□ 0.01
APOE-202ENST00000425718 ADAMTSL4-AS1Q5T5F5 129 aa15.1■□□□□ 0.01
APOE-202ENST00000425718 SLC25A34Q6PIV7 304 aa15.1■□□□□ 0.01
APOE-202ENST00000425718 Q8N1X5 172 aa15.1■□□□□ 0.01
APOE-202ENST00000425718 NDUFC2O95298 119 aa15.09■□□□□ 0.01
APOE-202ENST00000425718 SMR3BP02814 79 aaPredicted RBP15.09■□□□□ 0.01
APOE-202ENST00000425718 UBE2BP63146 152 aa15.08■□□□□ 0
APOE-202ENST00000425718 PHF5AQ7RTV0 110 aaKnown RBP15.08■□□□□ 0
APOE-202ENST00000425718 SPANXB1Q9NS25 103 aaPredicted RBP15.08■□□□□ 0
APOE-202ENST00000425718 KIAA1109Q2LD37 5005 aa15.07■□□□□ 0
APOE-202ENST00000425718 KRTAP7-1Q8IUC3 87 aa15.07■□□□□ 0
APOE-202ENST00000425718 LINC00308Q8TCZ7 52 aa15.07■□□□□ 0
APOE-202ENST00000425718 SRSF9Q13242 221 aaKnown RBP eCLIP15.06■□□□□ 0
APOE-202ENST00000425718 C14orf144Q96I85 54 aa15.06■□□□□ 0
APOE-202ENST00000425718 TRBV10-2A0A0K0K1G8 114 aa15.05■□□□□ -0
APOE-202ENST00000425718 M0R378 163 aa15.05■□□□□ -0
APOE-202ENST00000425718 RPL37AP61513 92 aaKnown RBP15.05■□□□□ -0
APOE-202ENST00000425718 LOC105371267A0A1B0GV96 52 aa15.04■□□□□ -0
APOE-202ENST00000425718 HIGD1BQ9P298 99 aa15.04■□□□□ -0
APOE-202ENST00000425718 NPC2P61916 151 aa15.02■□□□□ -0
APOE-202ENST00000425718 Q5VSD8 79 aa15.02■□□□□ -0
APOE-202ENST00000425718 LINC00167Q96N53 147 aa15.02■□□□□ -0
APOE-202ENST00000425718 SOSTDC1Q6X4U4 206 aa15.01□□□□□ -0.01
APOE-202ENST00000425718 LINC00518Q8N0U6 118 aa15.01□□□□□ -0.01
APOE-202ENST00000425718 CBY1Q9Y3M2 126 aa15.01□□□□□ -0.01
APOE-202ENST00000425718 HIST1H4GQ99525 98 aa14.98□□□□□ -0.01
APOE-202ENST00000425718 NCR3O14931 201 aa14.97□□□□□ -0.01
APOE-202ENST00000425718 UQCR10Q9UDW1 63 aa14.97□□□□□ -0.01
APOE-202ENST00000425718 GAGE10A6NGK3 116 aa14.96□□□□□ -0.01
APOE-202ENST00000425718 PRR3P79522 188 aaKnown RBP14.96□□□□□ -0.01
APOE-202ENST00000425718 MUSTN1Q8IVN3 82 aa14.96□□□□□ -0.01
APOE-202ENST00000425718 Q8NDZ9 215 aa14.96□□□□□ -0.01
APOE-202ENST00000425718 VPS13BQ7Z7G8 4022 aa14.96□□□□□ -0.01
APOE-202ENST00000425718 IGLV1-50A0A075B6I6 118 aa14.95□□□□□ -0.02
APOE-202ENST00000425718 PSORS1C2Q9UIG4 136 aa14.95□□□□□ -0.02
APOE-202ENST00000425718 TAL2Q16559 108 aa14.94□□□□□ -0.02
APOE-202ENST00000425718 S100A7L2Q5SY68 101 aa14.94□□□□□ -0.02
APOE-202ENST00000425718 RPL37AP8A6NKH3 93 aa14.93□□□□□ -0.02
APOE-202ENST00000425718 EIF4EBP3O60516 100 aaPredicted RBP14.92□□□□□ -0.02
APOE-202ENST00000425718 C1orf137Q5JT78 98 aa14.92□□□□□ -0.02
APOE-202ENST00000425718 IGKV2-28A0A075B6P5 120 aa14.91□□□□□ -0.02
APOE-202ENST00000425718 PRYO14603 147 aa14.91□□□□□ -0.02
APOE-202ENST00000425718 IGKV2D-28P01615 120 aa14.91□□□□□ -0.02
APOE-202ENST00000425718 DDTP30046 118 aa14.91□□□□□ -0.02
APOE-202ENST00000425718 TMEM126AQ9H061 195 aa14.9□□□□□ -0.02
APOE-202ENST00000425718 FAT1Q14517 4588 aa14.89□□□□□ -0.03
APOE-202ENST00000425718 C2orf91Q6ZV80 131 aa14.89□□□□□ -0.03
APOE-202ENST00000425718 REG3GQ6UW15 175 aa14.88□□□□□ -0.03
APOE-202ENST00000425718 KCNQ1DNQ9H478 68 aa14.88□□□□□ -0.03
APOE-202ENST00000425718 HERC2O95714 4834 aa14.87□□□□□ -0.03
APOE-202ENST00000425718 TRAV13-2A0A0B4J235 113 aa14.87□□□□□ -0.03
APOE-202ENST00000425718 TRBV10-3A0A0K0K1G6 114 aa14.87□□□□□ -0.03
APOE-202ENST00000425718 BCE1O60756 84 aa14.87□□□□□ -0.03
APOE-202ENST00000425718 IGLV6-57P01721 117 aa14.87□□□□□ -0.03
APOE-202ENST00000425718 OR13C6PQ8NH95 151 aa14.87□□□□□ -0.03
APOE-202ENST00000425718 C12orf57Q99622 126 aa14.86□□□□□ -0.03
APOE-202ENST00000425718 TMEM238LA0A1B0GVL6 79 aa14.85□□□□□ -0.03
APOE-202ENST00000425718 A6NJY4 79 aa14.85□□□□□ -0.03
APOE-202ENST00000425718 KRTAP11-1Q8IUC1 163 aa14.85□□□□□ -0.03
APOE-202ENST00000425718 IGLV7-43P04211 117 aa14.84□□□□□ -0.03
APOE-202ENST00000425718 HNRNPA3P51991 378 aaKnown RBP14.84□□□□□ -0.03
APOE-202ENST00000425718 KRTAP10-4P60372 401 aaPredicted RBP14.84□□□□□ -0.03
APOE-202ENST00000425718 A4D1N5 150 aa14.83□□□□□ -0.04
APOE-202ENST00000425718 TSTD3H0UI37 97 aa14.83□□□□□ -0.04
APOE-202ENST00000425718 HSD52Q0P140 79 aa14.83□□□□□ -0.04
APOE-202ENST00000425718 CEND1Q8N111 149 aa14.82□□□□□ -0.04
APOE-202ENST00000425718 TRAV23DV6A0A075B6W5 121 aa14.81□□□□□ -0.04
APOE-202ENST00000425718 RPL28P46779 137 aaKnown RBP14.81□□□□□ -0.04
APOE-202ENST00000425718 UBE2AP49459 152 aa14.8□□□□□ -0.04
APOE-202ENST00000425718 HINT1P49773 126 aaPredicted RBP14.8□□□□□ -0.04
APOE-202ENST00000425718 SPINK6Q6UWN8 80 aa14.8□□□□□ -0.04
APOE-202ENST00000425718 LINC00337Q8N6G1 96 aa14.8□□□□□ -0.04
APOE-202ENST00000425718 A6NDN8 102 aa14.79□□□□□ -0.04
APOE-202ENST00000425718 PRO1933Q9H354 126 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms