RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 TMEM238C9JI98 176 aa7.04□□□□□ -1.28
HLA-DQB3-203ENST00000425319 SPINK1P00995 79 aa7.04□□□□□ -1.28
HLA-DQB3-203ENST00000425319 VPREB1P12018 145 aa7.04□□□□□ -1.28
HLA-DQB3-203ENST00000425319 ADCYAP1P18509 176 aa7.04□□□□□ -1.28
HLA-DQB3-203ENST00000425319 M0R378 163 aa7.03□□□□□ -1.28
HLA-DQB3-203ENST00000425319 SCO1O75880 301 aa7.03□□□□□ -1.28
HLA-DQB3-203ENST00000425319 LINC00158P58513 81 aa7.03□□□□□ -1.28
HLA-DQB3-203ENST00000425319 DAND5Q8N907 189 aa7.03□□□□□ -1.28
HLA-DQB3-203ENST00000425319 SEC11CQ9BY50 192 aa7.03□□□□□ -1.28
HLA-DQB3-203ENST00000425319 FAM19A2Q8N3H0 131 aa7.02□□□□□ -1.29
HLA-DQB3-203ENST00000425319 C3orf22Q8N5N4 141 aa7.02□□□□□ -1.29
HLA-DQB3-203ENST00000425319 ZNF625Q96I27 306 aaPredicted RBP7.02□□□□□ -1.29
HLA-DQB3-203ENST00000425319 LINC00587B1AMM8 73 aa7.01□□□□□ -1.29
HLA-DQB3-203ENST00000425319 C10orf91Q5T1B1 145 aa7.01□□□□□ -1.29
HLA-DQB3-203ENST00000425319 SPRR4Q96PI1 79 aa7.01□□□□□ -1.29
HLA-DQB3-203ENST00000425319 APOC3P02656 99 aa7□□□□□ -1.29
HLA-DQB3-203ENST00000425319 IGLC3P0DOY3 106 aa7□□□□□ -1.29
HLA-DQB3-203ENST00000425319 ASB16-AS1Q495Z4 193 aa7□□□□□ -1.29
HLA-DQB3-203ENST00000425319 TMEM170BQ5T4T1 132 aa7□□□□□ -1.29
HLA-DQB3-203ENST00000425319 SVBPQ8N300 66 aa7□□□□□ -1.29
HLA-DQB3-203ENST00000425319 IGLV5-39A0A0G2JS06 123 aa6.99□□□□□ -1.29
HLA-DQB3-203ENST00000425319 ETDCA0A1B0GVM5 59 aa6.99□□□□□ -1.29
HLA-DQB3-203ENST00000425319 LINC01546A6NGU7 62 aa6.99□□□□□ -1.29
HLA-DQB3-203ENST00000425319 FABP9Q0Z7S8 132 aa6.99□□□□□ -1.29
HLA-DQB3-203ENST00000425319 Q8NBF4 154 aa6.99□□□□□ -1.29
HLA-DQB3-203ENST00000425319 PRYO14603 147 aa6.98□□□□□ -1.29
HLA-DQB3-203ENST00000425319 SNAPINO95295 136 aa6.98□□□□□ -1.29
HLA-DQB3-203ENST00000425319 ZNF22P17026 224 aaPredicted RBP6.97□□□□□ -1.29
HLA-DQB3-203ENST00000425319 SSBP3-AS1Q7Z2R9 100 aa6.97□□□□□ -1.29
HLA-DQB3-203ENST00000425319 BAGE3Q86Y29 109 aa6.97□□□□□ -1.29
HLA-DQB3-203ENST00000425319 SMCR5Q8TEV8 140 aa6.97□□□□□ -1.29
HLA-DQB3-203ENST00000425319 SLC25A20O43772 301 aa6.96□□□□□ -1.3
HLA-DQB3-203ENST00000425319 LINC00614P0C842 121 aa6.96□□□□□ -1.3
HLA-DQB3-203ENST00000425319 MEIG1Q5JSS6 88 aa6.96□□□□□ -1.3
HLA-DQB3-203ENST00000425319 MAP1LC3CQ9BXW4 147 aa6.96□□□□□ -1.3
HLA-DQB3-203ENST00000425319 HBDP02042 147 aa6.95□□□□□ -1.3
HLA-DQB3-203ENST00000425319 KRTAP13-3Q3SY46 172 aa6.95□□□□□ -1.3
HLA-DQB3-203ENST00000425319 BOD1L2Q8IYS8 172 aa6.95□□□□□ -1.3
HLA-DQB3-203ENST00000425319 A0A0U1RRA0 63 aa6.94□□□□□ -1.3
HLA-DQB3-203ENST00000425319 RPS29P62273 56 aaKnown RBP6.94□□□□□ -1.3
HLA-DQB3-203ENST00000425319 RHEBQ15382 184 aa6.94□□□□□ -1.3
HLA-DQB3-203ENST00000425319 GAGE2AQ6NT46 116 aa6.94□□□□□ -1.3
HLA-DQB3-203ENST00000425319 HERV-K104P63124 156 aa6.93□□□□□ -1.3
HLA-DQB3-203ENST00000425319 CHTOPQ9Y3Y2 248 aaKnown RBP6.93□□□□□ -1.3
HLA-DQB3-203ENST00000425319 IGLV9-49A0A0B4J1Y8 123 aa6.92□□□□□ -1.3
HLA-DQB3-203ENST00000425319 LCE2DQ5TA82 110 aaPredicted RBP6.92□□□□□ -1.3
HLA-DQB3-203ENST00000425319 KCNQ1DNQ9H478 68 aa6.92□□□□□ -1.3
HLA-DQB3-203ENST00000425319 FAT4Q6V0I7 4981 aa6.92□□□□□ -1.3
HLA-DQB3-203ENST00000425319 JOSD1Q15040 202 aaPredicted RBP6.91□□□□□ -1.3
HLA-DQB3-203ENST00000425319 RPS10P5Q9NQ39 176 aa6.91□□□□□ -1.3
HLA-DQB3-203ENST00000425319 C11orf86A6NJI1 115 aa6.9□□□□□ -1.3
HLA-DQB3-203ENST00000425319 NCR3O14931 201 aa6.9□□□□□ -1.3
HLA-DQB3-203ENST00000425319 TRAPPC1Q9Y5R8 145 aa6.9□□□□□ -1.3
HLA-DQB3-203ENST00000425319 SMIM13P0DJ93 91 aa6.89□□□□□ -1.31
HLA-DQB3-203ENST00000425319 HINT1P49773 126 aaPredicted RBP6.89□□□□□ -1.31
HLA-DQB3-203ENST00000425319 MOBPQ13875 183 aa6.89□□□□□ -1.31
HLA-DQB3-203ENST00000425319 MYMXA0A1B0GTQ4 84 aa6.88□□□□□ -1.31
HLA-DQB3-203ENST00000425319 SPRR1AP35321 89 aa6.88□□□□□ -1.31
HLA-DQB3-203ENST00000425319 LINC00483Q53H64 154 aa6.88□□□□□ -1.31
HLA-DQB3-203ENST00000425319 MIR7-3HGQ8N6C7 128 aa6.88□□□□□ -1.31
HLA-DQB3-203ENST00000425319 MIEN1Q9BRT3 115 aa6.88□□□□□ -1.31
HLA-DQB3-203ENST00000425319 CBY1Q9Y3M2 126 aa6.88□□□□□ -1.31
HLA-DQB3-203ENST00000425319 TMEM223A0PJW6 202 aa6.87□□□□□ -1.31
HLA-DQB3-203ENST00000425319 Q8NDZ9 215 aa6.87□□□□□ -1.31
HLA-DQB3-203ENST00000425319 TRBV10-3A0A0K0K1G6 114 aa6.86□□□□□ -1.31
HLA-DQB3-203ENST00000425319 S100A7L2Q5SY68 101 aa6.86□□□□□ -1.31
HLA-DQB3-203ENST00000425319 C9orf153Q5TBE3 101 aa6.86□□□□□ -1.31
HLA-DQB3-203ENST00000425319 Q8N377 158 aa6.86□□□□□ -1.31
HLA-DQB3-203ENST00000425319 TRAV12-1A0A0B4J245 112 aa6.85□□□□□ -1.31
HLA-DQB3-203ENST00000425319 CFC1BP0CG36 223 aa6.85□□□□□ -1.31
HLA-DQB3-203ENST00000425319 DDTP30046 118 aa6.85□□□□□ -1.31
HLA-DQB3-203ENST00000425319 PMCHL1Q16048 86 aa6.85□□□□□ -1.31
HLA-DQB3-203ENST00000425319 SLC25A34Q6PIV7 304 aa6.85□□□□□ -1.31
HLA-DQB3-203ENST00000425319 C18orf32Q8TCD1 76 aa6.85□□□□□ -1.31
HLA-DQB3-203ENST00000425319 CRCT1Q9UGL9 99 aa6.85□□□□□ -1.31
HLA-DQB3-203ENST00000425319 TRBV10-2A0A0K0K1G8 114 aa6.84□□□□□ -1.31
HLA-DQB3-203ENST00000425319 B5MCH6 92 aa6.84□□□□□ -1.31
HLA-DQB3-203ENST00000425319 XP32Q5T750 250 aa6.84□□□□□ -1.31
HLA-DQB3-203ENST00000425319 LIMD2Q9BT23 127 aa6.84□□□□□ -1.31
HLA-DQB3-203ENST00000425319 A0A096LNJ9 63 aa6.83□□□□□ -1.32
HLA-DQB3-203ENST00000425319 IFI27L1Q96BM0 104 aa6.83□□□□□ -1.32
HLA-DQB3-203ENST00000425319 C5orf52A6NGY3 159 aa6.82□□□□□ -1.32
HLA-DQB3-203ENST00000425319 KRTAP4-16G5E9R7 235 aaPredicted RBP6.82□□□□□ -1.32
HLA-DQB3-203ENST00000425319 MUC17Q685J3 4493 aa6.82□□□□□ -1.32
HLA-DQB3-203ENST00000425319 COLCA2A8K830 154 aa6.81□□□□□ -1.32
HLA-DQB3-203ENST00000425319 Q6ZRX8 168 aa6.81□□□□□ -1.32
HLA-DQB3-203ENST00000425319 CHCHD1Q96BP2 118 aaKnown RBP6.81□□□□□ -1.32
HLA-DQB3-203ENST00000425319 YPEL4Q96NS1 127 aa6.81□□□□□ -1.32
HLA-DQB3-203ENST00000425319 SPANXB1Q9NS25 103 aaPredicted RBP6.8□□□□□ -1.32
HLA-DQB3-203ENST00000425319 HERVK_113P61574 105 aa6.79□□□□□ -1.32
HLA-DQB3-203ENST00000425319 URB1-AS1Q96HZ7 61 aa6.79□□□□□ -1.32
HLA-DQB3-203ENST00000425319 IGLV8-61A0A075B6I0 122 aa6.78□□□□□ -1.32
HLA-DQB3-203ENST00000425319 HSBP1O75506 76 aa6.78□□□□□ -1.32
HLA-DQB3-203ENST00000425319 ERC2-IT1O76042 136 aa6.78□□□□□ -1.32
HLA-DQB3-203ENST00000425319 NDUFC2O95298 119 aa6.78□□□□□ -1.32
HLA-DQB3-203ENST00000425319 KRTAP4-1Q9BYQ7 146 aa6.78□□□□□ -1.32
HLA-DQB3-203ENST00000425319 TRAV23DV6A0A075B6W5 121 aa6.77□□□□□ -1.33
HLA-DQB3-203ENST00000425319 LOC107984156A0A0G2JMH3 177 aa6.77□□□□□ -1.33
HLA-DQB3-203ENST00000425319 LEPROTO15243 131 aa6.77□□□□□ -1.33
HLA-DQB3-203ENST00000425319 LGALS3P17931 250 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms