RNA–Protein interactions for RNA: ENST00000424747.1

SLC52A1-202, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,412 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-202ENST00000424747 SVIPQ8NHG7 77 aa11.48□□□□□ -0.57
SLC52A1-202ENST00000424747 C6orf99Q4VX62 202 aa11.47□□□□□ -0.57
SLC52A1-202ENST00000424747 C2orf48Q96LS8 159 aa11.47□□□□□ -0.57
SLC52A1-202ENST00000424747 OXLD1Q5BKU9 147 aa11.47□□□□□ -0.57
SLC52A1-202ENST00000424747 SMIM20Q8N5G0 67 aa11.47□□□□□ -0.57
SLC52A1-202ENST00000424747 RPL18AQ02543 176 aaKnown RBP11.46□□□□□ -0.58
SLC52A1-202ENST00000424747 C10orf25Q5T742 122 aa11.46□□□□□ -0.58
SLC52A1-202ENST00000424747 SPAG11BQ08648 103 aa11.45□□□□□ -0.58
SLC52A1-202ENST00000424747 C6orf223Q8N319 242 aa11.45□□□□□ -0.58
SLC52A1-202ENST00000424747 S100A7L2Q5SY68 101 aa11.45□□□□□ -0.58
SLC52A1-202ENST00000424747 LELP1Q5T871 98 aa11.45□□□□□ -0.58
SLC52A1-202ENST00000424747 UNQ6190/PRO20217Q6UXQ8 127 aa11.45□□□□□ -0.58
SLC52A1-202ENST00000424747 MUC7Q8TAX7 377 aa11.45□□□□□ -0.58
SLC52A1-202ENST00000424747 LINC00575Q6W349 94 aa11.43□□□□□ -0.58
SLC52A1-202ENST00000424747 A0A087WVE0 104 aa11.43□□□□□ -0.58
SLC52A1-202ENST00000424747 A0A0J9YWU9 116 aa11.43□□□□□ -0.58
SLC52A1-202ENST00000424747 FLNBO75369 2602 aaKnown RBP11.42□□□□□ -0.58
SLC52A1-202ENST00000424747 KRTAP10-11P60412 298 aa11.42□□□□□ -0.58
SLC52A1-202ENST00000424747 PRR34Q9NV39 138 aa11.42□□□□□ -0.58
SLC52A1-202ENST00000424747 CYSRT1A8MQ03 144 aa11.41□□□□□ -0.58
SLC52A1-202ENST00000424747 KRTAP24-1Q3LI83 254 aa11.41□□□□□ -0.58
SLC52A1-202ENST00000424747 CRYGAP11844 174 aa11.4□□□□□ -0.58
SLC52A1-202ENST00000424747 KLK12Q9UKR0 248 aa11.4□□□□□ -0.58
SLC52A1-202ENST00000424747 RETNQ9HD89 108 aa11.39□□□□□ -0.59
SLC52A1-202ENST00000424747 hADV29S1A0JD25 119 aa11.38□□□□□ -0.59
SLC52A1-202ENST00000424747 IGLV6-57P01721 117 aa11.38□□□□□ -0.59
SLC52A1-202ENST00000424747 ENHOQ6UWT2 76 aa11.38□□□□□ -0.59
SLC52A1-202ENST00000424747 ATP5EP2Q5VTU8 51 aa11.37□□□□□ -0.59
SLC52A1-202ENST00000424747 GVQW2A0A096LPI5 108 aaPredicted RBP11.37□□□□□ -0.59
SLC52A1-202ENST00000424747 USP17L23D6RBM5 183 aa11.37□□□□□ -0.59
SLC52A1-202ENST00000424747 LYPD5Q6UWN5 251 aa11.36□□□□□ -0.59
SLC52A1-202ENST00000424747 ZNF561-AS1K7EIQ3 104 aa11.36□□□□□ -0.59
SLC52A1-202ENST00000424747 SERP2Q8N6R1 65 aa11.36□□□□□ -0.59
SLC52A1-202ENST00000424747 C6orf48Q9UBA6 75 aa11.34□□□□□ -0.59
SLC52A1-202ENST00000424747 RBM3P98179 157 aaKnown RBP11.34□□□□□ -0.59
SLC52A1-202ENST00000424747 Q6ZQT0 140 aa11.34□□□□□ -0.59
SLC52A1-202ENST00000424747 UBL5Q9BZL1 73 aa11.33□□□□□ -0.6
SLC52A1-202ENST00000424747 STAB1Q9NY15 2570 aa11.32□□□□□ -0.6
SLC52A1-202ENST00000424747 FBN1P35555 2871 aaKnown RBP11.32□□□□□ -0.6
SLC52A1-202ENST00000424747 LOC110117498A0A087WWA1 95 aa11.32□□□□□ -0.6
SLC52A1-202ENST00000424747 EGFEM1PQ0D2K5 195 aa11.32□□□□□ -0.6
SLC52A1-202ENST00000424747 TRBV10-3A0A0K0K1G6 114 aa11.31□□□□□ -0.6
SLC52A1-202ENST00000424747 UPK3BQ9BT76 320 aa11.31□□□□□ -0.6
SLC52A1-202ENST00000424747 LAMTOR3Q9UHA4 124 aa11.31□□□□□ -0.6
SLC52A1-202ENST00000424747 PKD1L1Q8TDX9 2849 aa11.3□□□□□ -0.6
SLC52A1-202ENST00000424747 CYSTM1Q9H1C7 97 aa11.3□□□□□ -0.6
SLC52A1-202ENST00000424747 TRAV23DV6A0A075B6W5 121 aa11.3□□□□□ -0.6
SLC52A1-202ENST00000424747 Q6ZQY7 126 aa11.3□□□□□ -0.6
SLC52A1-202ENST00000424747 FAM19A1Q7Z5A9 133 aa11.29□□□□□ -0.6
SLC52A1-202ENST00000424747 XAGE1AQ9HD64 81 aa11.29□□□□□ -0.6
SLC52A1-202ENST00000424747 KPRPQ5T749 579 aaPredicted RBP11.29□□□□□ -0.6
SLC52A1-202ENST00000424747 Q6ZTC4 211 aa11.29□□□□□ -0.6
SLC52A1-202ENST00000424747 DIRC1Q969H9 104 aa11.29□□□□□ -0.6
SLC52A1-202ENST00000424747 H3BQ85 93 aa11.28□□□□□ -0.6
SLC52A1-202ENST00000424747 M0R2N4 97 aa11.27□□□□□ -0.61
SLC52A1-202ENST00000424747 WFDC10BQ8IUB3 73 aa11.26□□□□□ -0.61
SLC52A1-202ENST00000424747 DSCR8Q96T75 97 aa11.25□□□□□ -0.61
SLC52A1-202ENST00000424747 H3BNG1 76 aa11.25□□□□□ -0.61
SLC52A1-202ENST00000424747 ZNF73O43830 326 aaPredicted RBP11.25□□□□□ -0.61
SLC52A1-202ENST00000424747 GHRHP01286 108 aa11.25□□□□□ -0.61
SLC52A1-202ENST00000424747 KRTAP26-1Q6PEX3 210 aa11.25□□□□□ -0.61
SLC52A1-202ENST00000424747 HIGD2BQ4VC39 106 aa11.24□□□□□ -0.61
SLC52A1-202ENST00000424747 MAST4O15021 2626 aa11.24□□□□□ -0.61
SLC52A1-202ENST00000424747 COX7BP24311 80 aa11.24□□□□□ -0.61
SLC52A1-202ENST00000424747 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.24□□□□□ -0.61
SLC52A1-202ENST00000424747 CAMK2N2Q96S95 79 aa11.24□□□□□ -0.61
SLC52A1-202ENST00000424747 CMYA5Q8N3K9 4069 aa11.24□□□□□ -0.61
SLC52A1-202ENST00000424747 VPREB1P12018 145 aa11.23□□□□□ -0.61
SLC52A1-202ENST00000424747 PDE6GP18545 87 aa11.23□□□□□ -0.61
SLC52A1-202ENST00000424747 ELOF1P60002 83 aaKnown RBP11.23□□□□□ -0.61
SLC52A1-202ENST00000424747 ANK2Q01484 3957 aa11.22□□□□□ -0.61
SLC52A1-202ENST00000424747 TMEM258P61165 79 aa11.22□□□□□ -0.61
SLC52A1-202ENST00000424747 TRBV7-6A0A0J9YX20 115 aa11.21□□□□□ -0.61
SLC52A1-202ENST00000424747 TENM3Q9P273 2699 aa11.21□□□□□ -0.61
SLC52A1-202ENST00000424747 J3KT08 172 aa11.21□□□□□ -0.61
SLC52A1-202ENST00000424747 Q6ZVQ6 151 aa11.21□□□□□ -0.61
SLC52A1-202ENST00000424747 LINC01547P58512 204 aaPredicted RBP11.2□□□□□ -0.62
SLC52A1-202ENST00000424747 Q6ZRU5 148 aa11.2□□□□□ -0.62
SLC52A1-202ENST00000424747 LOC107984640A0A0U1RRK4 108 aa11.19□□□□□ -0.62
SLC52A1-202ENST00000424747 ESRGQ1W209 222 aa11.19□□□□□ -0.62
SLC52A1-202ENST00000424747 C15orf56Q8N910 161 aa11.19□□□□□ -0.62
SLC52A1-202ENST00000424747 C11orf45Q8TAV5 145 aa11.19□□□□□ -0.62
SLC52A1-202ENST00000424747 DEFB131BA0A096LNP1 70 aa11.18□□□□□ -0.62
SLC52A1-202ENST00000424747 TRBV7-4A0A0J9YYF1 115 aa11.18□□□□□ -0.62
SLC52A1-202ENST00000424747 M0R378 163 aa11.18□□□□□ -0.62
SLC52A1-202ENST00000424747 RPS28P62857 69 aaKnown RBP11.18□□□□□ -0.62
SLC52A1-202ENST00000424747 HAMPP81172 84 aa11.17□□□□□ -0.62
SLC52A1-202ENST00000424747 NDUFC2-KCTD14E9PQ53 114 aa11.17□□□□□ -0.62
SLC52A1-202ENST00000424747 PRB2P02812 416 aaPredicted RBP11.16□□□□□ -0.62
SLC52A1-202ENST00000424747 NOTCH1P46531 2555 aa11.15□□□□□ -0.62
SLC52A1-202ENST00000424747 BCE1O60756 84 aa11.15□□□□□ -0.63
SLC52A1-202ENST00000424747 CXCL6P80162 114 aa11.15□□□□□ -0.63
SLC52A1-202ENST00000424747 LINC00528Q8N1L1 170 aa11.15□□□□□ -0.63
SLC52A1-202ENST00000424747 COL6A5A8TX70 2615 aa11.13□□□□□ -0.63
SLC52A1-202ENST00000424747 DPH3Q96FX2 82 aa11.13□□□□□ -0.63
SLC52A1-202ENST00000424747 DNAH3Q8TD57 4116 aa11.12□□□□□ -0.63
SLC52A1-202ENST00000424747 C1orf43Q9BWL3 253 aa11.12□□□□□ -0.63
SLC52A1-202ENST00000424747 Q6ZRP5 223 aa11.11□□□□□ -0.63
SLC52A1-202ENST00000424747 BAHCC1Q9P281 2608 aa11.11□□□□□ -0.63
SLC52A1-202ENST00000424747 TRAV7A0A075B6U4 112 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms