RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ZNF726P1Q15940 193 aa3.36□□□□□ -1.87
SDCBP-203ENST00000424270 SPRR4Q96PI1 79 aa3.36□□□□□ -1.87
SDCBP-203ENST00000424270 TIMM17AQ99595 171 aa3.36□□□□□ -1.87
SDCBP-203ENST00000424270 FLGP20930 4061 aaPredicted RBP3.36□□□□□ -1.87
SDCBP-203ENST00000424270 TRBV6-5A0A0K0K1A5 114 aa3.35□□□□□ -1.87
SDCBP-203ENST00000424270 A0A1B0GV50 99 aa3.35□□□□□ -1.87
SDCBP-203ENST00000424270 ATP5LO75964 103 aa3.35□□□□□ -1.87
SDCBP-203ENST00000424270 SRP19P09132 144 aaKnown RBP3.35□□□□□ -1.87
SDCBP-203ENST00000424270 G0S2P27469 103 aa3.35□□□□□ -1.87
SDCBP-203ENST00000424270 RPL35P42766 123 aaKnown RBP3.35□□□□□ -1.87
SDCBP-203ENST00000424270 KRTAP10-10P60014 251 aa3.35□□□□□ -1.87
SDCBP-203ENST00000424270 RPS29P62273 56 aaKnown RBP3.35□□□□□ -1.87
SDCBP-203ENST00000424270 TMEM126AQ9H061 195 aa3.35□□□□□ -1.87
SDCBP-203ENST00000424270 MANBALQ9NQG1 85 aa3.35□□□□□ -1.87
SDCBP-203ENST00000424270 GNG13Q9P2W3 67 aa3.35□□□□□ -1.87
SDCBP-203ENST00000424270 TMEM250H0YL14 139 aa3.34□□□□□ -1.87
SDCBP-203ENST00000424270 PDE6DO43924 150 aa3.34□□□□□ -1.87
SDCBP-203ENST00000424270 IGLV6-57P01721 117 aa3.34□□□□□ -1.87
SDCBP-203ENST00000424270 MT-ND4LP03901 98 aa3.34□□□□□ -1.87
SDCBP-203ENST00000424270 CENPWQ5EE01 88 aa3.34□□□□□ -1.87
SDCBP-203ENST00000424270 LINC01551Q86U37 167 aa3.34□□□□□ -1.87
SDCBP-203ENST00000424270 BORCS7Q96B45 105 aa3.34□□□□□ -1.87
SDCBP-203ENST00000424270 RPS10P5Q9NQ39 176 aa3.34□□□□□ -1.87
SDCBP-203ENST00000424270 MUC12Q9UKN1 5478 aa3.33□□□□□ -1.88
SDCBP-203ENST00000424270 TRBV27A0A0K0K1C4 114 aa3.33□□□□□ -1.88
SDCBP-203ENST00000424270 COLCA2A8K830 154 aa3.33□□□□□ -1.88
SDCBP-203ENST00000424270 GNG4P50150 75 aa3.33□□□□□ -1.88
SDCBP-203ENST00000424270 KRTAP19-6Q3LI70 58 aa3.33□□□□□ -1.88
SDCBP-203ENST00000424270 TIMM21Q9BVV7 248 aa3.33□□□□□ -1.88
SDCBP-203ENST00000424270 TRBV20OR9-2A0A075B6H5 130 aa3.32□□□□□ -1.88
SDCBP-203ENST00000424270 KRTAP23-1A1A580 65 aa3.32□□□□□ -1.88
SDCBP-203ENST00000424270 F8VRH5 84 aa3.32□□□□□ -1.88
SDCBP-203ENST00000424270 MT2AP02795 61 aa3.32□□□□□ -1.88
SDCBP-203ENST00000424270 RAB5BP61020 215 aa3.32□□□□□ -1.88
SDCBP-203ENST00000424270 RPL39P62891 51 aaKnown RBP3.32□□□□□ -1.88
SDCBP-203ENST00000424270 PDZD11Q5EBL8 140 aa3.32□□□□□ -1.88
SDCBP-203ENST00000424270 C9orf153Q5TBE3 101 aa3.32□□□□□ -1.88
SDCBP-203ENST00000424270 Q6ZN92 141 aa3.32□□□□□ -1.88
SDCBP-203ENST00000424270 BIN3Q9NQY0 253 aa3.32□□□□□ -1.88
SDCBP-203ENST00000424270 NAT8Q9UHE5 227 aa3.32□□□□□ -1.88
SDCBP-203ENST00000424270 RAB5AP20339 215 aa3.31□□□□□ -1.88
SDCBP-203ENST00000424270 POLR2KP53803 58 aaKnown RBP3.31□□□□□ -1.88
SDCBP-203ENST00000424270 SMIM7Q9BQ49 75 aa3.31□□□□□ -1.88
SDCBP-203ENST00000424270 SPANXA1Q9NS26 97 aa3.31□□□□□ -1.88
SDCBP-203ENST00000424270 IGLV5-37A0A075B6J1 123 aa3.3□□□□□ -1.88
SDCBP-203ENST00000424270 C20orf202A1L168 122 aa3.3□□□□□ -1.88
SDCBP-203ENST00000424270 SMKR1H3BMG3 65 aa3.3□□□□□ -1.88
SDCBP-203ENST00000424270 M0R378 163 aa3.3□□□□□ -1.88
SDCBP-203ENST00000424270 PPP1R2P9O14990 202 aa3.3□□□□□ -1.88
SDCBP-203ENST00000424270 S100PP25815 95 aa3.3□□□□□ -1.88
SDCBP-203ENST00000424270 IFI27P40305 119 aaPredicted RBP3.3□□□□□ -1.88
SDCBP-203ENST00000424270 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
SDCBP-203ENST00000424270 SSBP3-AS1Q7Z2R9 100 aa3.3□□□□□ -1.88
SDCBP-203ENST00000424270 Q8IZM0 81 aa3.3□□□□□ -1.88
SDCBP-203ENST00000424270 YPEL4Q96NS1 127 aa3.3□□□□□ -1.88
SDCBP-203ENST00000424270 C2orf88Q9BSF0 95 aa3.3□□□□□ -1.88
SDCBP-203ENST00000424270 LIMD2Q9BT23 127 aa3.3□□□□□ -1.88
SDCBP-203ENST00000424270 TRBV24-1A0A075B6N3 115 aa3.29□□□□□ -1.88
SDCBP-203ENST00000424270 PPP1R17O96001 155 aa3.29□□□□□ -1.88
SDCBP-203ENST00000424270 MT1FP04733 61 aa3.29□□□□□ -1.88
SDCBP-203ENST00000424270 RPL23P62829 140 aaKnown RBP3.29□□□□□ -1.88
SDCBP-203ENST00000424270 PAPPA-AS1Q5QFB9 102 aa3.29□□□□□ -1.88
SDCBP-203ENST00000424270 HRCT1Q6UXD1 115 aa3.29□□□□□ -1.88
SDCBP-203ENST00000424270 FAM231DQ6ZW35 169 aa3.29□□□□□ -1.88
SDCBP-203ENST00000424270 C11orf52Q96A22 123 aa3.29□□□□□ -1.88
SDCBP-203ENST00000424270 CNFNQ9BYD5 112 aa3.29□□□□□ -1.88
SDCBP-203ENST00000424270 TMEM191AQ9H0A3 160 aa3.29□□□□□ -1.88
SDCBP-203ENST00000424270 TCAPO15273 167 aa3.28□□□□□ -1.88
SDCBP-203ENST00000424270 CXCL5P42830 114 aa3.28□□□□□ -1.88
SDCBP-203ENST00000424270 MRPS36P82909 103 aaKnown RBP3.28□□□□□ -1.88
SDCBP-203ENST00000424270 RPL24P83731 157 aaKnown RBP3.28□□□□□ -1.88
SDCBP-203ENST00000424270 RIGQ13278 110 aa3.28□□□□□ -1.88
SDCBP-203ENST00000424270 ADIRFQ15847 76 aa3.28□□□□□ -1.88
SDCBP-203ENST00000424270 TAL2Q16559 108 aa3.28□□□□□ -1.88
SDCBP-203ENST00000424270 TEX43Q6ZNM6 134 aa3.28□□□□□ -1.88
SDCBP-203ENST00000424270 LINC01561Q8N1V8 128 aa3.28□□□□□ -1.88
SDCBP-203ENST00000424270 MTURNQ8N3F0 131 aa3.28□□□□□ -1.88
SDCBP-203ENST00000424270 NRACQ8N912 160 aa3.28□□□□□ -1.88
SDCBP-203ENST00000424270 SMCR5Q8TEV8 140 aa3.28□□□□□ -1.88
SDCBP-203ENST00000424270 SPANXB1Q9NS25 103 aaPredicted RBP3.28□□□□□ -1.88
SDCBP-203ENST00000424270 TRBV20-1A0A075B6N2 111 aa3.27□□□□□ -1.89
SDCBP-203ENST00000424270 TRAV9-1A0A075B6T8 112 aa3.27□□□□□ -1.89
SDCBP-203ENST00000424270 K7EN84 100 aa3.27□□□□□ -1.89
SDCBP-203ENST00000424270 FAM19A3Q7Z5A8 133 aa3.27□□□□□ -1.89
SDCBP-203ENST00000424270 AMN1Q8IY45 258 aa3.27□□□□□ -1.89
SDCBP-203ENST00000424270 SMIM12Q96EX1 92 aa3.27□□□□□ -1.89
SDCBP-203ENST00000424270 FAM236DA0A1B0GTK5 79 aa3.26□□□□□ -1.89
SDCBP-203ENST00000424270 ETDCA0A1B0GVM5 59 aa3.26□□□□□ -1.89
SDCBP-203ENST00000424270 S100A8P05109 93 aa3.26□□□□□ -1.89
SDCBP-203ENST00000424270 KRTAP2-3P0C7H8 128 aa3.26□□□□□ -1.89
SDCBP-203ENST00000424270 FAM236CP0DP71 79 aa3.26□□□□□ -1.89
SDCBP-203ENST00000424270 PFN2P35080 140 aa3.26□□□□□ -1.89
SDCBP-203ENST00000424270 Q6ZVQ6 151 aa3.26□□□□□ -1.89
SDCBP-203ENST00000424270 TMEM141Q96I45 108 aa3.26□□□□□ -1.89
SDCBP-203ENST00000424270 KRTAP2-4Q9BYR9 128 aa3.26□□□□□ -1.89
SDCBP-203ENST00000424270 OSTCQ9NRP0 149 aa3.26□□□□□ -1.89
SDCBP-203ENST00000424270 A0A1B0GV72 72 aa3.25□□□□□ -1.89
SDCBP-203ENST00000424270 TRGC2P03986 189 aa3.25□□□□□ -1.89
SDCBP-203ENST00000424270 ATP11AUNQ6ZP68 121 aa3.25□□□□□ -1.89
SDCBP-203ENST00000424270 IGLV4-3A0A075B6K6 122 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 247 ms