RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 KRTAP9-7A8MTY7 169 aa6.72□□□□□ -1.33
USP49-204ENST00000423567 IGLV7-43P04211 117 aa6.72□□□□□ -1.33
USP49-204ENST00000423567 FABP4P15090 132 aa6.72□□□□□ -1.33
USP49-204ENST00000423567 MRPL55Q7Z7F7 128 aaKnown RBP6.72□□□□□ -1.33
USP49-204ENST00000423567 NKAPP1Q8N9T2 125 aa6.72□□□□□ -1.33
USP49-204ENST00000423567 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
USP49-204ENST00000423567 PKHD1L1Q86WI1 4243 aa6.72□□□□□ -1.33
USP49-204ENST00000423567 NUPR1O60356 82 aa6.71□□□□□ -1.34
USP49-204ENST00000423567 PLNP26678 52 aa6.71□□□□□ -1.34
USP49-204ENST00000423567 DIRC1Q969H9 104 aa6.71□□□□□ -1.34
USP49-204ENST00000423567 LINC01600Q96MT4 127 aa6.71□□□□□ -1.34
USP49-204ENST00000423567 PLA2G2DQ9UNK4 145 aa6.71□□□□□ -1.34
USP49-204ENST00000423567 ATP6V1G1O75348 118 aa6.7□□□□□ -1.34
USP49-204ENST00000423567 KRTAP11-1Q8IUC1 163 aa6.7□□□□□ -1.34
USP49-204ENST00000423567 MAP1LC3CQ9BXW4 147 aa6.7□□□□□ -1.34
USP49-204ENST00000423567 HIST1H2BKO60814 126 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 DPM2O94777 84 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 HIST1H2BJP06899 126 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 HIST1H2BOP23527 126 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 HIST1H2BBP33778 126 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 LINC00158P58513 81 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 HIST1H2BDP58876 126 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 HERVK_113P61574 105 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 HIST1H2BCP62807 126 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 RPL24P83731 157 aaKnown RBP6.69□□□□□ -1.34
USP49-204ENST00000423567 HIST2H2BEQ16778 126 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.69□□□□□ -1.34
USP49-204ENST00000423567 HIST1H2BHQ93079 126 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 HIST1H2BNQ99877 126 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 HIST1H2BMQ99879 126 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 KRTAP4-9Q9BYQ8 210 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 SND1-IT1Q9HBX3 110 aa6.69□□□□□ -1.34
USP49-204ENST00000423567 IGLV5-37A0A075B6J1 123 aa6.68□□□□□ -1.34
USP49-204ENST00000423567 LINC00587B1AMM8 73 aa6.68□□□□□ -1.34
USP49-204ENST00000423567 MT1HL1P0DM35 61 aa6.68□□□□□ -1.34
USP49-204ENST00000423567 HERV-K104P63124 156 aa6.68□□□□□ -1.34
USP49-204ENST00000423567 MEIG1Q5JSS6 88 aa6.68□□□□□ -1.34
USP49-204ENST00000423567 LINC00167Q96N53 147 aa6.68□□□□□ -1.34
USP49-204ENST00000423567 NDUFA12Q9UI09 145 aa6.68□□□□□ -1.34
USP49-204ENST00000423567 MYMXA0A1B0GTQ4 84 aa6.67□□□□□ -1.34
USP49-204ENST00000423567 GAGE10A6NGK3 116 aa6.67□□□□□ -1.34
USP49-204ENST00000423567 RPL37AP8A6NKH3 93 aa6.67□□□□□ -1.34
USP49-204ENST00000423567 H0Y9J4 135 aa6.67□□□□□ -1.34
USP49-204ENST00000423567 IGKCP01834 107 aa6.67□□□□□ -1.34
USP49-204ENST00000423567 PLEKHB2Q96CS7 222 aa6.67□□□□□ -1.34
USP49-204ENST00000423567 A0A0U1RRA0 63 aa6.66□□□□□ -1.34
USP49-204ENST00000423567 LEPROTO15243 131 aa6.66□□□□□ -1.34
USP49-204ENST00000423567 PMCHL2Q9BQD1 86 aa6.66□□□□□ -1.34
USP49-204ENST00000423567 ZNF861PO60384 105 aa6.65□□□□□ -1.34
USP49-204ENST00000423567 BCE1O60756 84 aa6.65□□□□□ -1.34
USP49-204ENST00000423567 SMIM13P0DJ93 91 aa6.65□□□□□ -1.34
USP49-204ENST00000423567 RPL28P46779 137 aaKnown RBP6.65□□□□□ -1.34
USP49-204ENST00000423567 J3QQQ9 107 aa6.64□□□□□ -1.35
USP49-204ENST00000423567 VPREB1P12018 145 aa6.64□□□□□ -1.35
USP49-204ENST00000423567 LGALS3P17931 250 aaKnown RBP6.64□□□□□ -1.35
USP49-204ENST00000423567 IGKV2-28A0A075B6P5 120 aa6.63□□□□□ -1.35
USP49-204ENST00000423567 SYS1-DBNDD2H3BUS1 97 aa6.63□□□□□ -1.35
USP49-204ENST00000423567 IGKV2D-28P01615 120 aa6.63□□□□□ -1.35
USP49-204ENST00000423567 S100A1P23297 94 aa6.63□□□□□ -1.35
USP49-204ENST00000423567 NMUP48645 174 aa6.63□□□□□ -1.35
USP49-204ENST00000423567 UBE2AP49459 152 aa6.63□□□□□ -1.35
USP49-204ENST00000423567 KRTAP10-8P60410 259 aa6.62□□□□□ -1.35
USP49-204ENST00000423567 PET117Q6UWS5 81 aa6.62□□□□□ -1.35
USP49-204ENST00000423567 BOD1L2Q8IYS8 172 aa6.62□□□□□ -1.35
USP49-204ENST00000423567 MIR7-3HGQ8N6C7 128 aa6.62□□□□□ -1.35
USP49-204ENST00000423567 IGLV1-50A0A075B6I6 118 aa6.61□□□□□ -1.35
USP49-204ENST00000423567 TSPEAR-AS2P59090 65 aa6.61□□□□□ -1.35
USP49-204ENST00000423567 M0R378 163 aa6.6□□□□□ -1.35
USP49-204ENST00000423567 COA6Q5JTJ3 125 aaKnown RBP6.6□□□□□ -1.35
USP49-204ENST00000423567 E9PLD3 99 aa6.59□□□□□ -1.35
USP49-204ENST00000423567 RPL13AP40429 203 aaKnown RBP6.59□□□□□ -1.35
USP49-204ENST00000423567 LINC01545Q5VT33 79 aa6.59□□□□□ -1.35
USP49-204ENST00000423567 FAM19A1Q7Z5A9 133 aa6.59□□□□□ -1.35
USP49-204ENST00000423567 PRR26Q8N8Z3 221 aa6.59□□□□□ -1.35
USP49-204ENST00000423567 MIEN1Q9BRT3 115 aa6.59□□□□□ -1.35
USP49-204ENST00000423567 TMEM126AQ9H061 195 aa6.59□□□□□ -1.35
USP49-204ENST00000423567 IGKV2D-26A0A0A0MRZ7 120 aa6.58□□□□□ -1.36
USP49-204ENST00000423567 C20orf202A1L168 122 aa6.58□□□□□ -1.36
USP49-204ENST00000423567 KRTDAPP60985 99 aa6.58□□□□□ -1.36
USP49-204ENST00000423567 S100A12P80511 92 aa6.58□□□□□ -1.36
USP49-204ENST00000423567 Q8NDZ9 215 aa6.58□□□□□ -1.36
USP49-204ENST00000423567 TMEM238C9JI98 176 aa6.57□□□□□ -1.36
USP49-204ENST00000423567 NCR3O14931 201 aa6.57□□□□□ -1.36
USP49-204ENST00000423567 KRTAP1-4P0C5Y4 121 aa6.57□□□□□ -1.36
USP49-204ENST00000423567 C3orf79P0CE67 100 aa6.57□□□□□ -1.36
USP49-204ENST00000423567 DAND5Q8N907 189 aa6.57□□□□□ -1.36
USP49-204ENST00000423567 HMCN2Q8NDA2 5059 aa6.56□□□□□ -1.36
USP49-204ENST00000423567 PRLHP81277 87 aa6.56□□□□□ -1.36
USP49-204ENST00000423567 A0A0J9YXY3 114 aa6.55□□□□□ -1.36
USP49-204ENST00000423567 PRYO14603 147 aa6.55□□□□□ -1.36
USP49-204ENST00000423567 AKR1D1P51857 326 aa6.55□□□□□ -1.36
USP49-204ENST00000423567 KRTAP13-1Q8IUC0 172 aa6.55□□□□□ -1.36
USP49-204ENST00000423567 LOC107984156A0A0G2JMH3 177 aa6.54□□□□□ -1.36
USP49-204ENST00000423567 ARL17AQ8IVW1 177 aa6.54□□□□□ -1.36
USP49-204ENST00000423567 TNXBP22105 4242 aa6.54□□□□□ -1.36
USP49-204ENST00000423567 TRBV10-3A0A0K0K1G6 114 aa6.53□□□□□ -1.36
USP49-204ENST00000423567 TRBV10-2A0A0K0K1G8 114 aa6.53□□□□□ -1.36
USP49-204ENST00000423567 ZNF815PA8K554 130 aa6.53□□□□□ -1.36
USP49-204ENST00000423567 CRYGAP11844 174 aa6.53□□□□□ -1.36
USP49-204ENST00000423567 S100A2P29034 98 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms