RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 IGKV2D-28P01615 120 aa5.54□□□□□ -1.52
NUP50-206ENST00000422489 PRR4Q16378 134 aa5.54□□□□□ -1.52
NUP50-206ENST00000422489 ERG28Q9UKR5 140 aa5.54□□□□□ -1.52
NUP50-206ENST00000422489 CHTOPQ9Y3Y2 248 aaKnown RBP5.54□□□□□ -1.52
NUP50-206ENST00000422489 IGLV5-37A0A075B6J1 123 aa5.53□□□□□ -1.52
NUP50-206ENST00000422489 SND1-IT1Q9HBX3 110 aa5.53□□□□□ -1.52
NUP50-206ENST00000422489 ANAPC11Q9NYG5 84 aa5.53□□□□□ -1.52
NUP50-206ENST00000422489 A0A0U1RRA0 63 aa5.52□□□□□ -1.53
NUP50-206ENST00000422489 LINC00158P58513 81 aa5.52□□□□□ -1.53
NUP50-206ENST00000422489 RPL24P83731 157 aaKnown RBP5.52□□□□□ -1.53
NUP50-206ENST00000422489 TYMSOSQ8TAI1 123 aa5.52□□□□□ -1.53
NUP50-206ENST00000422489 ATP6V1G1O75348 118 aa5.51□□□□□ -1.53
NUP50-206ENST00000422489 CRYGAP11844 174 aa5.51□□□□□ -1.53
NUP50-206ENST00000422489 COX17Q14061 63 aa5.51□□□□□ -1.53
NUP50-206ENST00000422489 CHCHD1Q96BP2 118 aaKnown RBP5.51□□□□□ -1.53
NUP50-206ENST00000422489 LRP2P98164 4655 aa5.51□□□□□ -1.53
NUP50-206ENST00000422489 A0A087X002 238 aa5.5□□□□□ -1.53
NUP50-206ENST00000422489 VPREB1P12018 145 aa5.5□□□□□ -1.53
NUP50-206ENST00000422489 FAM19A1Q7Z5A9 133 aa5.5□□□□□ -1.53
NUP50-206ENST00000422489 IFI27L1Q96BM0 104 aa5.5□□□□□ -1.53
NUP50-206ENST00000422489 TRAV12-1A0A0B4J245 112 aa5.49□□□□□ -1.53
NUP50-206ENST00000422489 TMEM223A0PJW6 202 aa5.49□□□□□ -1.53
NUP50-206ENST00000422489 TMEM238C9JI98 176 aa5.49□□□□□ -1.53
NUP50-206ENST00000422489 H0Y8G0 127 aa5.49□□□□□ -1.53
NUP50-206ENST00000422489 EIF4EBP3O60516 100 aaPredicted RBP5.49□□□□□ -1.53
NUP50-206ENST00000422489 HSBP1O75506 76 aa5.49□□□□□ -1.53
NUP50-206ENST00000422489 PRLHP81277 87 aa5.49□□□□□ -1.53
NUP50-206ENST00000422489 SFTA2Q6UW10 78 aa5.49□□□□□ -1.53
NUP50-206ENST00000422489 CBLN2Q8IUK8 224 aa5.49□□□□□ -1.53
NUP50-206ENST00000422489 FAM19A2Q8N3H0 131 aa5.49□□□□□ -1.53
NUP50-206ENST00000422489 YPEL4Q96NS1 127 aa5.49□□□□□ -1.53
NUP50-206ENST00000422489 TMEM126AQ9H061 195 aa5.49□□□□□ -1.53
NUP50-206ENST00000422489 MEIG1Q5JSS6 88 aa5.48□□□□□ -1.53
NUP50-206ENST00000422489 Q8NDZ9 215 aa5.48□□□□□ -1.53
NUP50-206ENST00000422489 SMIM13P0DJ93 91 aa5.47□□□□□ -1.53
NUP50-206ENST00000422489 KRTAP13-1Q8IUC0 172 aa5.47□□□□□ -1.53
NUP50-206ENST00000422489 IGKV2D-26A0A0A0MRZ7 120 aa5.46□□□□□ -1.54
NUP50-206ENST00000422489 M0R378 163 aa5.46□□□□□ -1.54
NUP50-206ENST00000422489 TRGC2P03986 189 aa5.46□□□□□ -1.54
NUP50-206ENST00000422489 KRTAP13-2Q52LG2 175 aa5.45□□□□□ -1.54
NUP50-206ENST00000422489 BOD1L2Q8IYS8 172 aa5.45□□□□□ -1.54
NUP50-206ENST00000422489 HIGD2AQ9BW72 106 aa5.45□□□□□ -1.54
NUP50-206ENST00000422489 RNF213Q63HN8 5207 aa5.45□□□□□ -1.54
NUP50-206ENST00000422489 NCR3O14931 201 aa5.44□□□□□ -1.54
NUP50-206ENST00000422489 LEPROTL1O95214 131 aa5.44□□□□□ -1.54
NUP50-206ENST00000422489 FABP4P15090 132 aa5.44□□□□□ -1.54
NUP50-206ENST00000422489 HERV-K104P63124 156 aa5.44□□□□□ -1.54
NUP50-206ENST00000422489 FAM229BQ4G0N7 80 aa5.44□□□□□ -1.54
NUP50-206ENST00000422489 KRTAP19-1Q8IUB9 90 aa5.44□□□□□ -1.54
NUP50-206ENST00000422489 SLC7A5P1Q8MH63 180 aa5.44□□□□□ -1.54
NUP50-206ENST00000422489 MIR7-3HGQ8N6C7 128 aa5.44□□□□□ -1.54
NUP50-206ENST00000422489 PLEKHB2Q96CS7 222 aa5.44□□□□□ -1.54
NUP50-206ENST00000422489 NDUFA12Q9UI09 145 aa5.44□□□□□ -1.54
NUP50-206ENST00000422489 MYMXA0A1B0GTQ4 84 aa5.43□□□□□ -1.54
NUP50-206ENST00000422489 LINC00587B1AMM8 73 aa5.43□□□□□ -1.54
NUP50-206ENST00000422489 SERF1AO75920 110 aa5.43□□□□□ -1.54
NUP50-206ENST00000422489 LINC00304Q8N9R0 145 aa5.43□□□□□ -1.54
NUP50-206ENST00000422489 MAP1LC3CQ9BXW4 147 aa5.43□□□□□ -1.54
NUP50-206ENST00000422489 PMCHL2Q9BQD1 86 aa5.42□□□□□ -1.54
NUP50-206ENST00000422489 LEPROTO15243 131 aa5.41□□□□□ -1.54
NUP50-206ENST00000422489 RETNLBQ9BQ08 111 aa5.41□□□□□ -1.54
NUP50-206ENST00000422489 HSPB8Q9UJY1 196 aa5.41□□□□□ -1.54
NUP50-206ENST00000422489 LPAP08519 4548 aa5.41□□□□□ -1.54
NUP50-206ENST00000422489 ETDCA0A1B0GVM5 59 aa5.4□□□□□ -1.54
NUP50-206ENST00000422489 PRYO14603 147 aa5.4□□□□□ -1.54
NUP50-206ENST00000422489 DPM2O94777 84 aa5.4□□□□□ -1.54
NUP50-206ENST00000422489 PLNP26678 52 aa5.4□□□□□ -1.54
NUP50-206ENST00000422489 LINC00310P59036 64 aa5.4□□□□□ -1.54
NUP50-206ENST00000422489 S100A12P80511 92 aa5.4□□□□□ -1.54
NUP50-206ENST00000422489 C3orf22Q8N5N4 141 aa5.4□□□□□ -1.54
NUP50-206ENST00000422489 DAND5Q8N907 189 aa5.4□□□□□ -1.54
NUP50-206ENST00000422489 SMCR5Q8TEV8 140 aa5.4□□□□□ -1.54
NUP50-206ENST00000422489 PPDPFQ9H3Y8 114 aa5.4□□□□□ -1.54
NUP50-206ENST00000422489 TRBV10-3A0A0K0K1G6 114 aa5.39□□□□□ -1.55
NUP50-206ENST00000422489 COLCA2A8K830 154 aa5.39□□□□□ -1.55
NUP50-206ENST00000422489 J3QQQ9 107 aa5.39□□□□□ -1.55
NUP50-206ENST00000422489 LGALS3P17931 250 aaKnown RBP5.39□□□□□ -1.55
NUP50-206ENST00000422489 TSPEAR-AS2P59090 65 aa5.39□□□□□ -1.55
NUP50-206ENST00000422489 HERVK_113P61574 105 aa5.39□□□□□ -1.55
NUP50-206ENST00000422489 SPRR4Q96PI1 79 aa5.39□□□□□ -1.55
NUP50-206ENST00000422489 ZNF706Q9Y5V0 76 aaPredicted RBP5.39□□□□□ -1.55
NUP50-206ENST00000422489 IGKCP01834 107 aa5.38□□□□□ -1.55
NUP50-206ENST00000422489 LINC00337Q8N6G1 96 aa5.38□□□□□ -1.55
NUP50-206ENST00000422489 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
NUP50-206ENST00000422489 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
NUP50-206ENST00000422489 KCNQ1DNQ9H478 68 aa5.38□□□□□ -1.55
NUP50-206ENST00000422489 MIEN1Q9BRT3 115 aa5.37□□□□□ -1.55
NUP50-206ENST00000422489 IGLV7-46A0A075B6I9 117 aa5.36□□□□□ -1.55
NUP50-206ENST00000422489 DDTP30046 118 aa5.36□□□□□ -1.55
NUP50-206ENST00000422489 SPRR1AP35321 89 aa5.36□□□□□ -1.55
NUP50-206ENST00000422489 NPC2P61916 151 aa5.36□□□□□ -1.55
NUP50-206ENST00000422489 NMUP48645 174 aa5.35□□□□□ -1.55
NUP50-206ENST00000422489 S100A7L2Q5SY68 101 aa5.35□□□□□ -1.55
NUP50-206ENST00000422489 GAGE2AQ6NT46 116 aa5.35□□□□□ -1.55
NUP50-206ENST00000422489 SPAG11AQ6PDA7 123 aa5.35□□□□□ -1.55
NUP50-206ENST00000422489 CDIP1Q9H305 208 aa5.35□□□□□ -1.55
NUP50-206ENST00000422489 B5MCH6 92 aa5.34□□□□□ -1.55
NUP50-206ENST00000422489 KRTAP4-16G5E9R7 235 aaPredicted RBP5.34□□□□□ -1.55
NUP50-206ENST00000422489 Q8NBF4 154 aa5.34□□□□□ -1.55
NUP50-206ENST00000422489 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms