RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 LINC01556Q5JQF7 62 aa6.76□□□□□ -1.33
CMSS1-201ENST00000421999 NTM-AS1Q6ZSK4 140 aa6.76□□□□□ -1.33
CMSS1-201ENST00000421999 PLAC8L1A1L4L8 177 aa6.76□□□□□ -1.33
CMSS1-201ENST00000421999 TMEM256-PLSCR3K7ERE1 68 aa6.75□□□□□ -1.33
CMSS1-201ENST00000421999 SLPIP03973 132 aa6.75□□□□□ -1.33
CMSS1-201ENST00000421999 TRBV30A0A0K0K1B3 111 aa6.74□□□□□ -1.33
CMSS1-201ENST00000421999 JMJD7-PLA2G4BH0Y9G9 81 aa6.74□□□□□ -1.33
CMSS1-201ENST00000421999 A0A0B4J2C4 111 aa6.74□□□□□ -1.33
CMSS1-201ENST00000421999 AMELXQ99217 191 aa6.74□□□□□ -1.33
CMSS1-201ENST00000421999 COX17Q14061 63 aa6.73□□□□□ -1.33
CMSS1-201ENST00000421999 Q6ZQY7 126 aa6.73□□□□□ -1.33
CMSS1-201ENST00000421999 H3BQ85 93 aa6.73□□□□□ -1.33
CMSS1-201ENST00000421999 LINC00588Q9Y4M8 146 aa6.73□□□□□ -1.33
CMSS1-201ENST00000421999 H0Y9J4 135 aa6.72□□□□□ -1.33
CMSS1-201ENST00000421999 H3BNG1 76 aa6.72□□□□□ -1.33
CMSS1-201ENST00000421999 Q6ZRU5 148 aa6.72□□□□□ -1.33
CMSS1-201ENST00000421999 Q8N3U1 123 aa6.72□□□□□ -1.33
CMSS1-201ENST00000421999 NBDYA0A0U1RRE5 68 aa6.72□□□□□ -1.33
CMSS1-201ENST00000421999 NDUFC2-KCTD14E9PQ53 114 aa6.72□□□□□ -1.33
CMSS1-201ENST00000421999 TIMM17BO60830 172 aa6.72□□□□□ -1.33
CMSS1-201ENST00000421999 PRR3P79522 188 aaKnown RBP6.72□□□□□ -1.33
CMSS1-201ENST00000421999 ZNF73O43830 326 aaPredicted RBP6.71□□□□□ -1.33
CMSS1-201ENST00000421999 WFDC2Q14508 124 aa6.71□□□□□ -1.33
CMSS1-201ENST00000421999 IGLV9-49A0A0B4J1Y8 123 aa6.71□□□□□ -1.34
CMSS1-201ENST00000421999 SPINK6Q6UWN8 80 aa6.71□□□□□ -1.34
CMSS1-201ENST00000421999 TRBV10-2A0A0K0K1G8 114 aa6.7□□□□□ -1.34
CMSS1-201ENST00000421999 RPL28P46779 137 aaKnown RBP6.7□□□□□ -1.34
CMSS1-201ENST00000421999 C2orf48Q96LS8 159 aa6.7□□□□□ -1.34
CMSS1-201ENST00000421999 C14orf132Q9NPU4 83 aa6.7□□□□□ -1.34
CMSS1-201ENST00000421999 C1orf137Q5JT78 98 aa6.69□□□□□ -1.34
CMSS1-201ENST00000421999 TRBV10-3A0A0K0K1G6 114 aa6.69□□□□□ -1.34
CMSS1-201ENST00000421999 H3BT86 120 aa6.69□□□□□ -1.34
CMSS1-201ENST00000421999 HRCT1Q6UXD1 115 aa6.69□□□□□ -1.34
CMSS1-201ENST00000421999 ZNF575Q86XF7 245 aa6.69□□□□□ -1.34
CMSS1-201ENST00000421999 TRIAP1O43715 76 aa6.69□□□□□ -1.34
CMSS1-201ENST00000421999 TCL1BO95988 128 aa6.69□□□□□ -1.34
CMSS1-201ENST00000421999 ZNF706Q9Y5V0 76 aaPredicted RBP6.69□□□□□ -1.34
CMSS1-201ENST00000421999 CELSR1Q9NYQ6 3014 aa6.68□□□□□ -1.34
CMSS1-201ENST00000421999 IGHV3OR16-9A0A0B4J2B5 98 aa6.68□□□□□ -1.34
CMSS1-201ENST00000421999 C5orf47Q569G3 176 aa6.68□□□□□ -1.34
CMSS1-201ENST00000421999 SMIM11BQ8TCY0 68 aa6.68□□□□□ -1.34
CMSS1-201ENST00000421999 TSPEAR-AS2P59090 65 aa6.68□□□□□ -1.34
CMSS1-201ENST00000421999 TEN1Q86WV5 123 aa6.68□□□□□ -1.34
CMSS1-201ENST00000421999 DHRS4-AS1Q9P1J3 65 aa6.68□□□□□ -1.34
CMSS1-201ENST00000421999 IGKV3D-7A0A0C4DH55 119 aa6.67□□□□□ -1.34
CMSS1-201ENST00000421999 PDZD2O15018 2839 aa6.67□□□□□ -1.34
CMSS1-201ENST00000421999 STAB2Q8WWQ8 2551 aa6.67□□□□□ -1.34
CMSS1-201ENST00000421999 C16orf90A8MZG2 172 aa6.67□□□□□ -1.34
CMSS1-201ENST00000421999 LINC01546A6NGU7 62 aa6.67□□□□□ -1.34
CMSS1-201ENST00000421999 C2orf91Q6ZV80 131 aa6.67□□□□□ -1.34
CMSS1-201ENST00000421999 PDE6GP18545 87 aa6.66□□□□□ -1.34
CMSS1-201ENST00000421999 TM2D3Q9BRN9 247 aa6.66□□□□□ -1.34
CMSS1-201ENST00000421999 CCKP06307 115 aa6.65□□□□□ -1.34
CMSS1-201ENST00000421999 MRPL55Q7Z7F7 128 aaKnown RBP6.65□□□□□ -1.34
CMSS1-201ENST00000421999 C3orf84H3BNL1 204 aa6.65□□□□□ -1.34
CMSS1-201ENST00000421999 MT-ATP8P03928 68 aa6.65□□□□□ -1.34
CMSS1-201ENST00000421999 REG3GQ6UW15 175 aa6.65□□□□□ -1.35
CMSS1-201ENST00000421999 WIPF1O43516 503 aa6.64□□□□□ -1.35
CMSS1-201ENST00000421999 ADAMTSL4-AS1Q5T5F5 129 aa6.64□□□□□ -1.35
CMSS1-201ENST00000421999 OTOGQ6ZRI0 2925 aa6.63□□□□□ -1.35
CMSS1-201ENST00000421999 BPY2O14599 106 aa6.63□□□□□ -1.35
CMSS1-201ENST00000421999 ACYP1P07311 99 aa6.63□□□□□ -1.35
CMSS1-201ENST00000421999 F8WDY8 70 aa6.62□□□□□ -1.35
CMSS1-201ENST00000421999 PRLHP81277 87 aa6.62□□□□□ -1.35
CMSS1-201ENST00000421999 LINC00612Q8N6U2 182 aa6.62□□□□□ -1.35
CMSS1-201ENST00000421999 CIRBP-AS1Q8TBR5 109 aa6.62□□□□□ -1.35
CMSS1-201ENST00000421999 J3KT08 172 aa6.62□□□□□ -1.35
CMSS1-201ENST00000421999 ENHOQ6UWT2 76 aa6.62□□□□□ -1.35
CMSS1-201ENST00000421999 NDUFV3P56181 108 aaKnown RBP6.62□□□□□ -1.35
CMSS1-201ENST00000421999 C22orf24Q9Y442 160 aa6.62□□□□□ -1.35
CMSS1-201ENST00000421999 A0A1B0GX51 115 aa6.61□□□□□ -1.35
CMSS1-201ENST00000421999 RTL8CO15255 209 aa6.61□□□□□ -1.35
CMSS1-201ENST00000421999 DNAH10OSP0CZ25 163 aa6.61□□□□□ -1.35
CMSS1-201ENST00000421999 LINC01561Q8N1V8 128 aa6.61□□□□□ -1.35
CMSS1-201ENST00000421999 NBPF19A0A087WUL8 3843 aa6.61□□□□□ -1.35
CMSS1-201ENST00000421999 CSMD1Q96PZ7 3565 aa6.61□□□□□ -1.35
CMSS1-201ENST00000421999 C10orf25Q5T742 122 aa6.6□□□□□ -1.35
CMSS1-201ENST00000421999 SCXQ7RTU7 201 aa6.6□□□□□ -1.35
CMSS1-201ENST00000421999 TEX49A0A1B0GTD5 131 aa6.6□□□□□ -1.35
CMSS1-201ENST00000421999 C6orf48Q9UBA6 75 aa6.6□□□□□ -1.35
CMSS1-201ENST00000421999 SVEP1Q4LDE5 3571 aa6.59□□□□□ -1.35
CMSS1-201ENST00000421999 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.59□□□□□ -1.35
CMSS1-201ENST00000421999 CSMD2Q7Z408 3487 aa6.58□□□□□ -1.36
CMSS1-201ENST00000421999 CHTF8P0CG12 524 aa6.58□□□□□ -1.36
CMSS1-201ENST00000421999 IGLV5-39A0A0G2JS06 123 aa6.58□□□□□ -1.36
CMSS1-201ENST00000421999 FAM229AH3BQW9 127 aa6.57□□□□□ -1.36
CMSS1-201ENST00000421999 LST1O00453 97 aa6.57□□□□□ -1.36
CMSS1-201ENST00000421999 XGP55808 180 aa6.57□□□□□ -1.36
CMSS1-201ENST00000421999 MP68P56378 58 aa6.57□□□□□ -1.36
CMSS1-201ENST00000421999 NDUFC2O95298 119 aa6.56□□□□□ -1.36
CMSS1-201ENST00000421999 CCDC179H3BU77 68 aa6.56□□□□□ -1.36
CMSS1-201ENST00000421999 LINC00167Q96N53 147 aa6.56□□□□□ -1.36
CMSS1-201ENST00000421999 IGKV4-1P06312 121 aa6.55□□□□□ -1.36
CMSS1-201ENST00000421999 PRYO14603 147 aa6.55□□□□□ -1.36
CMSS1-201ENST00000421999 IGLV5-45A0A087WSX0 123 aa6.54□□□□□ -1.36
CMSS1-201ENST00000421999 PHF5AQ7RTV0 110 aaKnown RBP6.54□□□□□ -1.36
CMSS1-201ENST00000421999 VPS13CQ709C8 3753 aa6.54□□□□□ -1.36
CMSS1-201ENST00000421999 LINC00337Q8N6G1 96 aa6.54□□□□□ -1.36
CMSS1-201ENST00000421999 Q9BRP9 147 aa6.54□□□□□ -1.36
CMSS1-201ENST00000421999 UPK3BQ9BT76 320 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 206.3 ms