RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 INMT-MINDY4F8WBC2 141 aa2.63□□□□□ -1.99
SFXN1-202ENST00000421887 SIX6O95475 246 aa2.63□□□□□ -1.99
SFXN1-202ENST00000421887 SPINK1P00995 79 aa2.63□□□□□ -1.99
SFXN1-202ENST00000421887 ATP6V0CP27449 155 aa2.63□□□□□ -1.99
SFXN1-202ENST00000421887 DEFA1P59665 94 aa2.63□□□□□ -1.99
SFXN1-202ENST00000421887 RNASE13Q5GAN3 156 aaKnown RBP2.63□□□□□ -1.99
SFXN1-202ENST00000421887 GATD1Q8NB37 220 aa2.63□□□□□ -1.99
SFXN1-202ENST00000421887 PPP1R1CQ8WVI7 109 aa2.63□□□□□ -1.99
SFXN1-202ENST00000421887 RPL39LQ96EH5 51 aaKnown RBP2.63□□□□□ -1.99
SFXN1-202ENST00000421887 FAM210AQ96ND0 272 aa2.63□□□□□ -1.99
SFXN1-202ENST00000421887 PSMG3Q9BT73 122 aaPredicted RBP2.63□□□□□ -1.99
SFXN1-202ENST00000421887 TP73-AS1Q9UF72 201 aa2.63□□□□□ -1.99
SFXN1-202ENST00000421887 PRO0628Q9UI54 55 aa2.63□□□□□ -1.99
SFXN1-202ENST00000421887 IGHV6-1A0A0B4J1U7 121 aa2.62□□□□□ -1.99
SFXN1-202ENST00000421887 CTXND1A0A1B0GTU2 59 aa2.62□□□□□ -1.99
SFXN1-202ENST00000421887 ZNF727A8MUV8 499 aa2.62□□□□□ -1.99
SFXN1-202ENST00000421887 LYRM1O43325 122 aa2.62□□□□□ -1.99
SFXN1-202ENST00000421887 IFNA1P01562 189 aa2.62□□□□□ -1.99
SFXN1-202ENST00000421887 IGLC6P0CF74 106 aa2.62□□□□□ -1.99
SFXN1-202ENST00000421887 FCER1GP30273 86 aa2.62□□□□□ -1.99
SFXN1-202ENST00000421887 LYZL1Q6UWQ5 148 aa2.62□□□□□ -1.99
SFXN1-202ENST00000421887 C3orf22Q8N5N4 141 aa2.62□□□□□ -1.99
SFXN1-202ENST00000421887 ST20Q9HBF5 79 aa2.62□□□□□ -1.99
SFXN1-202ENST00000421887 TMEM242Q9NWH2 141 aa2.62□□□□□ -1.99
SFXN1-202ENST00000421887 MACF1Q9UPN3 7388 aaKnown RBP2.62□□□□□ -1.99
SFXN1-202ENST00000421887 TGIF2-C20orf24A0A0A6YYL0 155 aa2.61□□□□□ -1.99
SFXN1-202ENST00000421887 PFDN1O60925 122 aa2.61□□□□□ -1.99
SFXN1-202ENST00000421887 MPC2O95563 127 aa2.61□□□□□ -1.99
SFXN1-202ENST00000421887 FOXA3P55318 350 aaPredicted RBP2.61□□□□□ -1.99
SFXN1-202ENST00000421887 CKS1BP61024 79 aa2.61□□□□□ -1.99
SFXN1-202ENST00000421887 XAGE1AQ9HD64 81 aa2.61□□□□□ -1.99
SFXN1-202ENST00000421887 TMEM223A0PJW6 202 aa2.6□□□□□ -1.99
SFXN1-202ENST00000421887 BPY2O14599 106 aa2.6□□□□□ -1.99
SFXN1-202ENST00000421887 SLC25A20O43772 301 aa2.6□□□□□ -1.99
SFXN1-202ENST00000421887 IL7P13232 177 aa2.6□□□□□ -1.99
SFXN1-202ENST00000421887 PRLHP81277 87 aa2.6□□□□□ -1.99
SFXN1-202ENST00000421887 KRTAP6-3Q3LI67 103 aa2.6□□□□□ -1.99
SFXN1-202ENST00000421887 AKR1C8PQ5T2L2 129 aa2.6□□□□□ -1.99
SFXN1-202ENST00000421887 C2orf82Q6UX34 121 aa2.6□□□□□ -1.99
SFXN1-202ENST00000421887 CBY1Q9Y3M2 126 aa2.6□□□□□ -1.99
SFXN1-202ENST00000421887 A0A096LNJ9 63 aa2.59□□□□□ -1.99
SFXN1-202ENST00000421887 MAP1LC3B2A6NCE7 125 aa2.59□□□□□ -1.99
SFXN1-202ENST00000421887 SCO1O75880 301 aa2.59□□□□□ -1.99
SFXN1-202ENST00000421887 Q6Q795 121 aa2.59□□□□□ -1.99
SFXN1-202ENST00000421887 Q6ZUT4 128 aa2.59□□□□□ -1.99
SFXN1-202ENST00000421887 KRTAP13-1Q8IUC0 172 aa2.59□□□□□ -1.99
SFXN1-202ENST00000421887 C9orf62Q8N4C0 152 aa2.59□□□□□ -1.99
SFXN1-202ENST00000421887 GNB1LQ9BYB4 327 aa2.59□□□□□ -1.99
SFXN1-202ENST00000421887 MAP1LC3BQ9GZQ8 125 aa2.59□□□□□ -1.99
SFXN1-202ENST00000421887 RNASE7Q9H1E1 156 aaKnown RBP2.59□□□□□ -1.99
SFXN1-202ENST00000421887 USH2AO75445 5202 aa2.59□□□□□ -2
SFXN1-202ENST00000421887 IGKV2-28A0A075B6P5 120 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 BORCS7-ASMTA0A0B4J1R7 106 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 TRBV6-5A0A0K0K1A5 114 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 PLA2G10O15496 165 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 IGKV2D-28P01615 120 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 H2BFSP57053 126 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 RPS29P62273 56 aaKnown RBP2.58□□□□□ -2
SFXN1-202ENST00000421887 DEFB116Q30KQ4 102 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 FAM231DQ6ZW35 169 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 LINC01551Q86U37 167 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 PLEKHB2Q96CS7 222 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 HIGD2AQ9BW72 106 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 BIN3Q9NQY0 253 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 C8orf17Q9NRJ1 99 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 SPANXB1Q9NS25 103 aaPredicted RBP2.58□□□□□ -2
SFXN1-202ENST00000421887 TOMM7Q9P0U1 55 aa2.58□□□□□ -2
SFXN1-202ENST00000421887 ZNF706Q9Y5V0 76 aaPredicted RBP2.58□□□□□ -2
SFXN1-202ENST00000421887 TRBV27A0A0K0K1C4 114 aa2.57□□□□□ -2
SFXN1-202ENST00000421887 LOC389332A0A1B0GUA5 103 aa2.57□□□□□ -2
SFXN1-202ENST00000421887 SSNA1O43805 119 aa2.57□□□□□ -2
SFXN1-202ENST00000421887 RPL35P42766 123 aaKnown RBP2.57□□□□□ -2
SFXN1-202ENST00000421887 HBBP68871 147 aa2.57□□□□□ -2
SFXN1-202ENST00000421887 BORCS7Q96B45 105 aa2.57□□□□□ -2
SFXN1-202ENST00000421887 TIMM21Q9BVV7 248 aa2.57□□□□□ -2
SFXN1-202ENST00000421887 FCGBPQ9Y6R7 5405 aaPredicted RBP2.57□□□□□ -2
SFXN1-202ENST00000421887 SSPOA2VEC9 5147 aa2.57□□□□□ -2
SFXN1-202ENST00000421887 A0A1B0GXF2 115 aa2.56□□□□□ -2
SFXN1-202ENST00000421887 C9orf92A6NGG3 77 aa2.56□□□□□ -2
SFXN1-202ENST00000421887 GNG4P50150 75 aa2.56□□□□□ -2
SFXN1-202ENST00000421887 POLR2KP53803 58 aaKnown RBP2.56□□□□□ -2
SFXN1-202ENST00000421887 PDZD11Q5EBL8 140 aa2.56□□□□□ -2
SFXN1-202ENST00000421887 CENPWQ5EE01 88 aa2.56□□□□□ -2
SFXN1-202ENST00000421887 ANAPC13Q9BS18 74 aa2.56□□□□□ -2
SFXN1-202ENST00000421887 CNFNQ9BYD5 112 aa2.56□□□□□ -2
SFXN1-202ENST00000421887 C9JQL5 133 aa2.55□□□□□ -2
SFXN1-202ENST00000421887 PPP1R17O96001 155 aa2.55□□□□□ -2
SFXN1-202ENST00000421887 ORMDL3Q8N138 153 aa2.55□□□□□ -2
SFXN1-202ENST00000421887 SMIM12Q96EX1 92 aa2.55□□□□□ -2
SFXN1-202ENST00000421887 YPEL4Q96NS1 127 aa2.55□□□□□ -2
SFXN1-202ENST00000421887 SPRR4Q96PI1 79 aa2.55□□□□□ -2
SFXN1-202ENST00000421887 TMEM126AQ9H061 195 aa2.55□□□□□ -2
SFXN1-202ENST00000421887 SPANXA1Q9NS26 97 aa2.55□□□□□ -2
SFXN1-202ENST00000421887 TRBV20OR9-2A0A075B6H5 130 aa2.54□□□□□ -2
SFXN1-202ENST00000421887 A0A1B0GV50 99 aa2.54□□□□□ -2
SFXN1-202ENST00000421887 A8MWL6 223 aa2.54□□□□□ -2
SFXN1-202ENST00000421887 F8VRH5 84 aa2.54□□□□□ -2
SFXN1-202ENST00000421887 SCGB1C2P0DMR2 95 aa2.54□□□□□ -2
SFXN1-202ENST00000421887 RPL7L1Q6DKI1 246 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms