RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 Q8NBF4 154 aa8.49□□□□□ -1.05
CLCN4-203ENST00000421085 PRO3102Q9H379 93 aa8.49□□□□□ -1.05
CLCN4-203ENST00000421085 ABCA2Q9BZC7 2435 aa8.49□□□□□ -1.05
CLCN4-203ENST00000421085 ATP11AUNQ6ZP68 121 aa8.49□□□□□ -1.05
CLCN4-203ENST00000421085 C8orf87E5RJ46 101 aa8.48□□□□□ -1.05
CLCN4-203ENST00000421085 NHLRC4P0CG21 123 aaPredicted RBP8.48□□□□□ -1.05
CLCN4-203ENST00000421085 PIEZO2Q9H5I5 2752 aa8.48□□□□□ -1.05
CLCN4-203ENST00000421085 LINC00476Q8WZB0 136 aa8.48□□□□□ -1.05
CLCN4-203ENST00000421085 CCDC168Q8NDH2 2452 aa8.47□□□□□ -1.05
CLCN4-203ENST00000421085 TRAV22A0A0B4J277 110 aa8.47□□□□□ -1.05
CLCN4-203ENST00000421085 RPL37AP61513 92 aaKnown RBP8.47□□□□□ -1.05
CLCN4-203ENST00000421085 PTPRBP23467 1997 aa8.46□□□□□ -1.06
CLCN4-203ENST00000421085 A8MUN3 132 aa8.46□□□□□ -1.06
CLCN4-203ENST00000421085 MOBPQ13875 183 aa8.46□□□□□ -1.06
CLCN4-203ENST00000421085 MUC4Q99102 2169 aa8.46□□□□□ -1.06
CLCN4-203ENST00000421085 Q6ZRX8 168 aa8.46□□□□□ -1.06
CLCN4-203ENST00000421085 ST20-AS1Q8NBB2 130 aa8.45□□□□□ -1.06
CLCN4-203ENST00000421085 MYO9AB2RTY4 2548 aa8.45□□□□□ -1.06
CLCN4-203ENST00000421085 IGLV8-61A0A075B6I0 122 aa8.45□□□□□ -1.06
CLCN4-203ENST00000421085 TRBV7-4A0A0J9YYF1 115 aa8.42□□□□□ -1.06
CLCN4-203ENST00000421085 ERC2-IT1O76042 136 aa8.42□□□□□ -1.06
CLCN4-203ENST00000421085 DOPEY1Q5JWR5 2465 aa8.41□□□□□ -1.06
CLCN4-203ENST00000421085 VPREB1P12018 145 aa8.4□□□□□ -1.06
CLCN4-203ENST00000421085 C1orf134Q5TEV5 83 aa8.4□□□□□ -1.06
CLCN4-203ENST00000421085 LINC00336Q6ZUF6 198 aa8.4□□□□□ -1.06
CLCN4-203ENST00000421085 SPACA4Q8TDM5 124 aa8.4□□□□□ -1.06
CLCN4-203ENST00000421085 WDR87Q6ZQQ6 2873 aa8.4□□□□□ -1.07
CLCN4-203ENST00000421085 K7EQZ3 153 aa8.39□□□□□ -1.07
CLCN4-203ENST00000421085 COA5Q86WW8 74 aa8.39□□□□□ -1.07
CLCN4-203ENST00000421085 SPINT4Q6UDR6 99 aa8.38□□□□□ -1.07
CLCN4-203ENST00000421085 PHF5AQ7RTV0 110 aaKnown RBP8.38□□□□□ -1.07
CLCN4-203ENST00000421085 EIF4EBP3O60516 100 aaPredicted RBP8.37□□□□□ -1.07
CLCN4-203ENST00000421085 CYP4F30PQ9H0H9 118 aa8.37□□□□□ -1.07
CLCN4-203ENST00000421085 IGLV6-57P01721 117 aa8.37□□□□□ -1.07
CLCN4-203ENST00000421085 EPM2AB3EWF7 344 aa8.37□□□□□ -1.07
CLCN4-203ENST00000421085 KLKP1Q107X0 134 aa8.36□□□□□ -1.07
CLCN4-203ENST00000421085 LINC00313P59037 77 aa8.35□□□□□ -1.07
CLCN4-203ENST00000421085 A8MWP4 228 aa8.34□□□□□ -1.07
CLCN4-203ENST00000421085 Q6ZRP5 223 aa8.34□□□□□ -1.08
CLCN4-203ENST00000421085 IGF2RP11717 2491 aa8.33□□□□□ -1.08
CLCN4-203ENST00000421085 H7BZZ5 65 aa8.33□□□□□ -1.08
CLCN4-203ENST00000421085 FN1P02751 2386 aaKnown RBP8.33□□□□□ -1.08
CLCN4-203ENST00000421085 GVQW2A0A096LPI5 108 aaPredicted RBP8.32□□□□□ -1.08
CLCN4-203ENST00000421085 LOC101927531A0A1B0GV80 90 aa8.32□□□□□ -1.08
CLCN4-203ENST00000421085 CHTF8P0CG12 524 aa8.31□□□□□ -1.08
CLCN4-203ENST00000421085 LINC01600Q96MT4 127 aa8.31□□□□□ -1.08
CLCN4-203ENST00000421085 H3BNG1 76 aa8.31□□□□□ -1.08
CLCN4-203ENST00000421085 CD164Q04900 197 aa8.3□□□□□ -1.08
CLCN4-203ENST00000421085 SSBP3-AS1Q7Z2R9 100 aa8.3□□□□□ -1.08
CLCN4-203ENST00000421085 COL27A1Q8IZC6 1860 aaPredicted RBP8.3□□□□□ -1.08
CLCN4-203ENST00000421085 FAM168BA1KXE4 195 aa8.3□□□□□ -1.08
CLCN4-203ENST00000421085 C16orf90A8MZG2 172 aa8.29□□□□□ -1.08
CLCN4-203ENST00000421085 MDFIQ99750 246 aa8.29□□□□□ -1.08
CLCN4-203ENST00000421085 UQCR11O14957 56 aa8.28□□□□□ -1.08
CLCN4-203ENST00000421085 MRPL34Q9BQ48 92 aaKnown RBP8.28□□□□□ -1.08
CLCN4-203ENST00000421085 TLN1Q9Y490 2541 aaKnown RBP8.27□□□□□ -1.09
CLCN4-203ENST00000421085 LINC00528Q8N1L1 170 aa8.26□□□□□ -1.09
CLCN4-203ENST00000421085 KTN1-AS1Q86SY8 53 aa8.25□□□□□ -1.09
CLCN4-203ENST00000421085 NCOR2Q9Y618 2525 aa8.25□□□□□ -1.09
CLCN4-203ENST00000421085 KLK9Q2XQG4 91 aa8.24□□□□□ -1.09
CLCN4-203ENST00000421085 C9orf129Q5T035 196 aaKnown RBP8.24□□□□□ -1.09
CLCN4-203ENST00000421085 Q8NAQ8 132 aa8.24□□□□□ -1.09
CLCN4-203ENST00000421085 KCNQ1DNQ9H478 68 aa8.24□□□□□ -1.09
CLCN4-203ENST00000421085 IGLV1-50A0A075B6I6 118 aa8.24□□□□□ -1.09
CLCN4-203ENST00000421085 Q96NJ1 140 aa8.24□□□□□ -1.09
CLCN4-203ENST00000421085 MIR22HGQ0VDD5 57 aa8.24□□□□□ -1.09
CLCN4-203ENST00000421085 IGFL1Q6UW32 110 aa8.23□□□□□ -1.09
CLCN4-203ENST00000421085 PLA2G1BP04054 148 aaKnown RBP8.23□□□□□ -1.09
CLCN4-203ENST00000421085 FAM229AH3BQW9 127 aa8.23□□□□□ -1.09
CLCN4-203ENST00000421085 LINC00588Q9Y4M8 146 aa8.22□□□□□ -1.09
CLCN4-203ENST00000421085 PRR15Q8IV56 129 aa8.22□□□□□ -1.09
CLCN4-203ENST00000421085 ABCA12Q86UK0 2595 aa8.22□□□□□ -1.09
CLCN4-203ENST00000421085 RTL8CO15255 209 aa8.2□□□□□ -1.1
CLCN4-203ENST00000421085 Q8N377 158 aa8.2□□□□□ -1.1
CLCN4-203ENST00000421085 TYMSOSQ8TAI1 123 aa8.2□□□□□ -1.1
CLCN4-203ENST00000421085 LCA10Q71F78 164 aa8.19□□□□□ -1.1
CLCN4-203ENST00000421085 C8orf17Q9NRJ1 99 aa8.19□□□□□ -1.1
CLCN4-203ENST00000421085 USP9XQ93008 2570 aaPredicted RBP8.19□□□□□ -1.1
CLCN4-203ENST00000421085 ZNF462Q96JM2 2506 aa8.19□□□□□ -1.1
CLCN4-203ENST00000421085 TLN2Q9Y4G6 2542 aa8.18□□□□□ -1.1
CLCN4-203ENST00000421085 A0A0G2JQZ4 141 aa8.18□□□□□ -1.1
CLCN4-203ENST00000421085 A0A1W2PNN7 141 aa8.18□□□□□ -1.1
CLCN4-203ENST00000421085 JMJD1CQ15652 2540 aa8.17□□□□□ -1.1
CLCN4-203ENST00000421085 SETD2Q9BYW2 2564 aaPredicted RBP8.17□□□□□ -1.1
CLCN4-203ENST00000421085 DNAH10OSP0CZ25 163 aa8.16□□□□□ -1.1
CLCN4-203ENST00000421085 NBDYA0A0U1RRE5 68 aa8.15□□□□□ -1.1
CLCN4-203ENST00000421085 DSCR10P59022 87 aa8.15□□□□□ -1.1
CLCN4-203ENST00000421085 CSNK1G2-AS1Q8NCQ2 148 aa8.14□□□□□ -1.11
CLCN4-203ENST00000421085 LRRK2Q5S007 2527 aa8.14□□□□□ -1.11
CLCN4-203ENST00000421085 EP400Q96L91 3159 aa8.13□□□□□ -1.11
CLCN4-203ENST00000421085 PKD1L2Q7Z442 2459 aa8.13□□□□□ -1.11
CLCN4-203ENST00000421085 CENPFP49454 3210 aa8.13□□□□□ -1.11
CLCN4-203ENST00000421085 A0A1B0GVX0 72 aa8.13□□□□□ -1.11
CLCN4-203ENST00000421085 APLNQ9ULZ1 77 aa8.13□□□□□ -1.11
CLCN4-203ENST00000421085 COL4A2P08572 1712 aa8.13□□□□□ -1.11
CLCN4-203ENST00000421085 CRIPTQ9P021 101 aa8.12□□□□□ -1.11
CLCN4-203ENST00000421085 C15orf56Q8N910 161 aa8.12□□□□□ -1.11
CLCN4-203ENST00000421085 PRR34Q9NV39 138 aa8.11□□□□□ -1.11
CLCN4-203ENST00000421085 OBSCN-AS1Q96MR7 158 aa8.1□□□□□ -1.11
CLCN4-203ENST00000421085 CDC42SE1Q9NRR8 79 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms