RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 FP248Q71RG6 208 aaPredicted RBP9.61□□□□□ -0.87
UPF3AP3-201ENST00000420996 TRAV9-1A0A075B6T8 112 aa9.6□□□□□ -0.87
UPF3AP3-201ENST00000420996 IGLC3P0DOY3 106 aa9.6□□□□□ -0.87
UPF3AP3-201ENST00000420996 HIGD2AQ9BW72 106 aa9.6□□□□□ -0.87
UPF3AP3-201ENST00000420996 Q8NDZ9 215 aa9.59□□□□□ -0.87
UPF3AP3-201ENST00000420996 LINC00337Q8N6G1 96 aa9.58□□□□□ -0.88
UPF3AP3-201ENST00000420996 SPRR4Q96PI1 79 aa9.58□□□□□ -0.88
UPF3AP3-201ENST00000420996 ZNF22P17026 224 aaPredicted RBP9.57□□□□□ -0.88
UPF3AP3-201ENST00000420996 FA2HQ7L5A8 372 aa9.57□□□□□ -0.88
UPF3AP3-201ENST00000420996 RPS10P5Q9NQ39 176 aa9.57□□□□□ -0.88
UPF3AP3-201ENST00000420996 KRTAP13-3Q3SY46 172 aa9.56□□□□□ -0.88
UPF3AP3-201ENST00000420996 ASB16-AS1Q495Z4 193 aa9.56□□□□□ -0.88
UPF3AP3-201ENST00000420996 ZNF625Q96I27 306 aaPredicted RBP9.56□□□□□ -0.88
UPF3AP3-201ENST00000420996 SMCO4Q9NRQ5 59 aa9.56□□□□□ -0.88
UPF3AP3-201ENST00000420996 RHEBQ15382 184 aa9.55□□□□□ -0.88
UPF3AP3-201ENST00000420996 S100PP25815 95 aa9.54□□□□□ -0.88
UPF3AP3-201ENST00000420996 NDUFA6P56556 154 aa9.54□□□□□ -0.88
UPF3AP3-201ENST00000420996 SFTA2Q6UW10 78 aa9.54□□□□□ -0.88
UPF3AP3-201ENST00000420996 ZNF706Q9Y5V0 76 aaPredicted RBP9.54□□□□□ -0.88
UPF3AP3-201ENST00000420996 LINC01547P58512 204 aaPredicted RBP9.53□□□□□ -0.88
UPF3AP3-201ENST00000420996 APOC3P02656 99 aa9.52□□□□□ -0.89
UPF3AP3-201ENST00000420996 Q8NBF4 154 aa9.52□□□□□ -0.89
UPF3AP3-201ENST00000420996 COX19Q49B96 90 aa9.51□□□□□ -0.89
UPF3AP3-201ENST00000420996 DAND5Q8N907 189 aa9.51□□□□□ -0.89
UPF3AP3-201ENST00000420996 A0A096LNJ9 63 aa9.5□□□□□ -0.89
UPF3AP3-201ENST00000420996 SPINK1P00995 79 aa9.5□□□□□ -0.89
UPF3AP3-201ENST00000420996 FABP9Q0Z7S8 132 aa9.5□□□□□ -0.89
UPF3AP3-201ENST00000420996 LINC00158P58513 81 aa9.49□□□□□ -0.89
UPF3AP3-201ENST00000420996 SEC61BP60468 96 aaKnown RBP9.49□□□□□ -0.89
UPF3AP3-201ENST00000420996 C11orf86A6NJI1 115 aa9.48□□□□□ -0.89
UPF3AP3-201ENST00000420996 PRYO14603 147 aa9.48□□□□□ -0.89
UPF3AP3-201ENST00000420996 TMEM170BQ5T4T1 132 aa9.48□□□□□ -0.89
UPF3AP3-201ENST00000420996 URB1-AS1Q96HZ7 61 aa9.48□□□□□ -0.89
UPF3AP3-201ENST00000420996 YPEL4Q96NS1 127 aa9.48□□□□□ -0.89
UPF3AP3-201ENST00000420996 KRTAP4-1Q9BYQ7 146 aa9.48□□□□□ -0.89
UPF3AP3-201ENST00000420996 SMCR5Q8TEV8 140 aa9.47□□□□□ -0.89
UPF3AP3-201ENST00000420996 HBDP02042 147 aa9.46□□□□□ -0.9
UPF3AP3-201ENST00000420996 LINC00614P0C842 121 aa9.46□□□□□ -0.9
UPF3AP3-201ENST00000420996 BAGE3Q86Y29 109 aa9.46□□□□□ -0.9
UPF3AP3-201ENST00000420996 A0A0U1RRA0 63 aa9.45□□□□□ -0.9
UPF3AP3-201ENST00000420996 SNAPINO95295 136 aa9.45□□□□□ -0.9
UPF3AP3-201ENST00000420996 SPRR1AP35321 89 aa9.45□□□□□ -0.9
UPF3AP3-201ENST00000420996 SVBPQ8N300 66 aa9.45□□□□□ -0.9
UPF3AP3-201ENST00000420996 KCNQ1DNQ9H478 68 aa9.45□□□□□ -0.9
UPF3AP3-201ENST00000420996 LINC00483Q53H64 154 aa9.44□□□□□ -0.9
UPF3AP3-201ENST00000420996 C18orf32Q8TCD1 76 aa9.44□□□□□ -0.9
UPF3AP3-201ENST00000420996 KRTAP4-16G5E9R7 235 aaPredicted RBP9.43□□□□□ -0.9
UPF3AP3-201ENST00000420996 BOD1L2Q8IYS8 172 aa9.43□□□□□ -0.9
UPF3AP3-201ENST00000420996 NDUFA12Q9UI09 145 aa9.43□□□□□ -0.9
UPF3AP3-201ENST00000420996 TRAPPC1Q9Y5R8 145 aa9.43□□□□□ -0.9
UPF3AP3-201ENST00000420996 ETDCA0A1B0GVM5 59 aa9.42□□□□□ -0.9
UPF3AP3-201ENST00000420996 RPS29P62273 56 aaKnown RBP9.42□□□□□ -0.9
UPF3AP3-201ENST00000420996 PMCHL1Q16048 86 aa9.42□□□□□ -0.9
UPF3AP3-201ENST00000420996 NCR3O14931 201 aa9.41□□□□□ -0.9
UPF3AP3-201ENST00000420996 FAM19A2Q8N3H0 131 aa9.41□□□□□ -0.9
UPF3AP3-201ENST00000420996 TMEM223A0PJW6 202 aa9.4□□□□□ -0.9
UPF3AP3-201ENST00000420996 SMIM13P0DJ93 91 aa9.4□□□□□ -0.9
UPF3AP3-201ENST00000420996 SSBP3-AS1Q7Z2R9 100 aa9.4□□□□□ -0.9
UPF3AP3-201ENST00000420996 Q8N377 158 aa9.4□□□□□ -0.9
UPF3AP3-201ENST00000420996 CHTOPQ9Y3Y2 248 aaKnown RBP9.4□□□□□ -0.9
UPF3AP3-201ENST00000420996 GAGE2AQ6NT46 116 aa9.39□□□□□ -0.91
UPF3AP3-201ENST00000420996 TRBV10-3A0A0K0K1G6 114 aa9.38□□□□□ -0.91
UPF3AP3-201ENST00000420996 MOBPQ13875 183 aa9.38□□□□□ -0.91
UPF3AP3-201ENST00000420996 MIR7-3HGQ8N6C7 128 aa9.38□□□□□ -0.91
UPF3AP3-201ENST00000420996 CRCT1Q9UGL9 99 aa9.38□□□□□ -0.91
UPF3AP3-201ENST00000420996 IGLV9-49A0A0B4J1Y8 123 aa9.37□□□□□ -0.91
UPF3AP3-201ENST00000420996 SLC25A20O43772 301 aa9.37□□□□□ -0.91
UPF3AP3-201ENST00000420996 MEIG1Q5JSS6 88 aa9.37□□□□□ -0.91
UPF3AP3-201ENST00000420996 B5MCH6 92 aa9.36□□□□□ -0.91
UPF3AP3-201ENST00000420996 HERV-K104P63124 156 aa9.36□□□□□ -0.91
UPF3AP3-201ENST00000420996 S100A12P80511 92 aa9.36□□□□□ -0.91
UPF3AP3-201ENST00000420996 XP32Q5T750 250 aa9.36□□□□□ -0.91
UPF3AP3-201ENST00000420996 LINC00587B1AMM8 73 aa9.35□□□□□ -0.91
UPF3AP3-201ENST00000420996 ERC2-IT1O76042 136 aa9.35□□□□□ -0.91
UPF3AP3-201ENST00000420996 TRAV12-1A0A0B4J245 112 aa9.34□□□□□ -0.91
UPF3AP3-201ENST00000420996 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
UPF3AP3-201ENST00000420996 FSIP2Q5CZC0 6907 aa9.31□□□□□ -0.92
UPF3AP3-201ENST00000420996 IFI27L1Q96BM0 104 aa9.31□□□□□ -0.92
UPF3AP3-201ENST00000420996 Q9BRP9 147 aa9.31□□□□□ -0.92
UPF3AP3-201ENST00000420996 MAP1LC3CQ9BXW4 147 aa9.31□□□□□ -0.92
UPF3AP3-201ENST00000420996 MYMXA0A1B0GTQ4 84 aa9.3□□□□□ -0.92
UPF3AP3-201ENST00000420996 LOC107984156A0A0G2JMH3 177 aa9.29□□□□□ -0.92
UPF3AP3-201ENST00000420996 TRBV10-2A0A0K0K1G8 114 aa9.29□□□□□ -0.92
UPF3AP3-201ENST00000420996 DDTP30046 118 aa9.29□□□□□ -0.92
UPF3AP3-201ENST00000420996 Q6ZRX8 168 aa9.29□□□□□ -0.92
UPF3AP3-201ENST00000420996 ARL17AQ8IVW1 177 aa9.29□□□□□ -0.92
UPF3AP3-201ENST00000420996 TRGC2P03986 189 aa9.28□□□□□ -0.92
UPF3AP3-201ENST00000420996 LINC00310P59036 64 aa9.28□□□□□ -0.92
UPF3AP3-201ENST00000420996 TMA7Q9Y2S6 64 aaKnown RBP9.28□□□□□ -0.92
UPF3AP3-201ENST00000420996 CHCHD1Q96BP2 118 aaKnown RBP9.26□□□□□ -0.93
UPF3AP3-201ENST00000420996 COLCA2A8K830 154 aa9.25□□□□□ -0.93
UPF3AP3-201ENST00000420996 KRTAP19-2Q3LHN2 52 aa9.25□□□□□ -0.93
UPF3AP3-201ENST00000420996 C9orf153Q5TBE3 101 aa9.25□□□□□ -0.93
UPF3AP3-201ENST00000420996 A6NJY4 79 aa9.24□□□□□ -0.93
UPF3AP3-201ENST00000420996 JOSD1Q15040 202 aaPredicted RBP9.24□□□□□ -0.93
UPF3AP3-201ENST00000420996 SPANXB1Q9NS25 103 aaPredicted RBP9.24□□□□□ -0.93
UPF3AP3-201ENST00000420996 IGLV6-57P01721 117 aa9.22□□□□□ -0.93
UPF3AP3-201ENST00000420996 TSPEAR-AS2P59090 65 aa9.22□□□□□ -0.93
UPF3AP3-201ENST00000420996 MT1HP80294 61 aa9.22□□□□□ -0.93
UPF3AP3-201ENST00000420996 S100A7L2Q5SY68 101 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms