RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 CRYGAP11844 174 aa10.26□□□□□ -0.77
MSH6-203ENST00000420813 FAM19A2Q8N3H0 131 aa10.26□□□□□ -0.77
MSH6-203ENST00000420813 H3BRM9 83 aa10.25□□□□□ -0.77
MSH6-203ENST00000420813 HBDP02042 147 aa10.25□□□□□ -0.77
MSH6-203ENST00000420813 LINC00518Q8N0U6 118 aa10.25□□□□□ -0.77
MSH6-203ENST00000420813 NKAPP1Q8N9T2 125 aa10.25□□□□□ -0.77
MSH6-203ENST00000420813 ATP5LO75964 103 aa10.24□□□□□ -0.77
MSH6-203ENST00000420813 JOSD1Q15040 202 aaPredicted RBP10.24□□□□□ -0.77
MSH6-203ENST00000420813 PMCHL1Q16048 86 aa10.24□□□□□ -0.77
MSH6-203ENST00000420813 PYY3Q5JQD4 70 aa10.24□□□□□ -0.77
MSH6-203ENST00000420813 C12orf57Q99622 126 aa10.24□□□□□ -0.77
MSH6-203ENST00000420813 HSPB8Q9UJY1 196 aa10.24□□□□□ -0.77
MSH6-203ENST00000420813 GAGE10A6NGK3 116 aa10.23□□□□□ -0.77
MSH6-203ENST00000420813 LEPROTL1O95214 131 aa10.23□□□□□ -0.77
MSH6-203ENST00000420813 KRTAP13-1Q8IUC0 172 aa10.23□□□□□ -0.77
MSH6-203ENST00000420813 TYMSOSQ8TAI1 123 aa10.23□□□□□ -0.77
MSH6-203ENST00000420813 IGLC3P0DOY3 106 aa10.22□□□□□ -0.77
MSH6-203ENST00000420813 KRTDAPP60985 99 aa10.22□□□□□ -0.77
MSH6-203ENST00000420813 A0A096LNJ9 63 aa10.21□□□□□ -0.77
MSH6-203ENST00000420813 IGLV5-39A0A0G2JS06 123 aa10.21□□□□□ -0.77
MSH6-203ENST00000420813 TSPAN13O95857 204 aa10.21□□□□□ -0.77
MSH6-203ENST00000420813 UBE2AP49459 152 aa10.21□□□□□ -0.77
MSH6-203ENST00000420813 C20orf202A1L168 122 aa10.19□□□□□ -0.78
MSH6-203ENST00000420813 C3orf79P0CE67 100 aa10.19□□□□□ -0.78
MSH6-203ENST00000420813 FAM229BQ4G0N7 80 aa10.19□□□□□ -0.78
MSH6-203ENST00000420813 SCGB1D1O95968 90 aa10.18□□□□□ -0.78
MSH6-203ENST00000420813 MAP1LC3CQ9BXW4 147 aa10.18□□□□□ -0.78
MSH6-203ENST00000420813 IGKV2-28A0A075B6P5 120 aa10.17□□□□□ -0.78
MSH6-203ENST00000420813 IGKV2D-28P01615 120 aa10.17□□□□□ -0.78
MSH6-203ENST00000420813 ZNF22P17026 224 aaPredicted RBP10.17□□□□□ -0.78
MSH6-203ENST00000420813 PFN2P35080 140 aa10.17□□□□□ -0.78
MSH6-203ENST00000420813 COX17Q14061 63 aa10.17□□□□□ -0.78
MSH6-203ENST00000420813 VPREB1P12018 145 aa10.16□□□□□ -0.78
MSH6-203ENST00000420813 KRTAP13-2Q52LG2 175 aa10.16□□□□□ -0.78
MSH6-203ENST00000420813 ANAPC11Q9NYG5 84 aa10.16□□□□□ -0.78
MSH6-203ENST00000420813 ERG28Q9UKR5 140 aa10.16□□□□□ -0.78
MSH6-203ENST00000420813 SYS1-DBNDD2H3BUS1 97 aa10.15□□□□□ -0.78
MSH6-203ENST00000420813 S100A12P80511 92 aa10.15□□□□□ -0.78
MSH6-203ENST00000420813 RPL24P83731 157 aaKnown RBP10.15□□□□□ -0.78
MSH6-203ENST00000420813 SFTA2Q6UW10 78 aa10.15□□□□□ -0.78
MSH6-203ENST00000420813 PET117Q6UWS5 81 aa10.15□□□□□ -0.78
MSH6-203ENST00000420813 SND1-IT1Q9HBX3 110 aa10.15□□□□□ -0.78
MSH6-203ENST00000420813 MUC2Q02817 5179 aa10.14□□□□□ -0.79
MSH6-203ENST00000420813 IFI27L1Q96BM0 104 aa10.14□□□□□ -0.79
MSH6-203ENST00000420813 TMEM126AQ9H061 195 aa10.13□□□□□ -0.79
MSH6-203ENST00000420813 A0A0U1RQV1 116 aa10.12□□□□□ -0.79
MSH6-203ENST00000420813 FAM19A1Q7Z5A9 133 aa10.12□□□□□ -0.79
MSH6-203ENST00000420813 LINC00304Q8N9R0 145 aa10.12□□□□□ -0.79
MSH6-203ENST00000420813 CTAG1AP78358 180 aa10.11□□□□□ -0.79
MSH6-203ENST00000420813 PRLHP81277 87 aa10.11□□□□□ -0.79
MSH6-203ENST00000420813 LINC01545Q5VT33 79 aa10.11□□□□□ -0.79
MSH6-203ENST00000420813 IGKV2D-26A0A0A0MRZ7 120 aa10.1□□□□□ -0.79
MSH6-203ENST00000420813 C11orf86A6NJI1 115 aa10.1□□□□□ -0.79
MSH6-203ENST00000420813 TMEM238C9JI98 176 aa10.1□□□□□ -0.79
MSH6-203ENST00000420813 H0Y8G0 127 aa10.1□□□□□ -0.79
MSH6-203ENST00000420813 ZNF625Q96I27 306 aaPredicted RBP10.1□□□□□ -0.79
MSH6-203ENST00000420813 VAMP8Q9BV40 100 aa10.1□□□□□ -0.79
MSH6-203ENST00000420813 M0R378 163 aa10.09□□□□□ -0.79
MSH6-203ENST00000420813 TMEM170BQ5T4T1 132 aa10.09□□□□□ -0.79
MSH6-203ENST00000420813 Q8NDZ9 215 aa10.08□□□□□ -0.8
MSH6-203ENST00000420813 TSTD3H0UI37 97 aa10.06□□□□□ -0.8
MSH6-203ENST00000420813 PLEKHB2Q96CS7 222 aa10.06□□□□□ -0.8
MSH6-203ENST00000420813 RETNLBQ9BQ08 111 aa10.06□□□□□ -0.8
MSH6-203ENST00000420813 TRAV12-1A0A0B4J245 112 aa10.05□□□□□ -0.8
MSH6-203ENST00000420813 HSBP1L1C9JCN9 74 aa10.04□□□□□ -0.8
MSH6-203ENST00000420813 ATOH7Q8N100 152 aa10.04□□□□□ -0.8
MSH6-203ENST00000420813 PAM16Q9Y3D7 125 aa10.04□□□□□ -0.8
MSH6-203ENST00000420813 CHTOPQ9Y3Y2 248 aaKnown RBP10.04□□□□□ -0.8
MSH6-203ENST00000420813 LINC00158P58513 81 aa10.03□□□□□ -0.8
MSH6-203ENST00000420813 TPRXLQ17RH7 258 aa10.03□□□□□ -0.8
MSH6-203ENST00000420813 TMEM223A0PJW6 202 aa10.02□□□□□ -0.81
MSH6-203ENST00000420813 PLNP26678 52 aa10.02□□□□□ -0.81
MSH6-203ENST00000420813 SPATA45Q537H7 98 aa10.02□□□□□ -0.81
MSH6-203ENST00000420813 PMCHL2Q9BQD1 86 aa10.02□□□□□ -0.81
MSH6-203ENST00000420813 HIGD2AQ9BW72 106 aa10.02□□□□□ -0.81
MSH6-203ENST00000420813 DPM2O94777 84 aa10.01□□□□□ -0.81
MSH6-203ENST00000420813 C3orf22Q8N5N4 141 aa10□□□□□ -0.81
MSH6-203ENST00000420813 IGLV7-46A0A075B6I9 117 aa9.99□□□□□ -0.81
MSH6-203ENST00000420813 PCP4L1A6NKN8 68 aa9.99□□□□□ -0.81
MSH6-203ENST00000420813 IGKCP01834 107 aa9.99□□□□□ -0.81
MSH6-203ENST00000420813 SPAG11AQ6PDA7 123 aa9.99□□□□□ -0.81
MSH6-203ENST00000420813 SPRR4Q96PI1 79 aa9.99□□□□□ -0.81
MSH6-203ENST00000420813 CDIP1Q9H305 208 aa9.99□□□□□ -0.81
MSH6-203ENST00000420813 PRO1933Q9H354 126 aa9.99□□□□□ -0.81
MSH6-203ENST00000420813 PRYO14603 147 aa9.98□□□□□ -0.81
MSH6-203ENST00000420813 ZNF706Q9Y5V0 76 aaPredicted RBP9.98□□□□□ -0.81
MSH6-203ENST00000420813 A0A0U1RRA0 63 aa9.97□□□□□ -0.81
MSH6-203ENST00000420813 SMIM13P0DJ93 91 aa9.96□□□□□ -0.82
MSH6-203ENST00000420813 HERV-K104P63124 156 aa9.96□□□□□ -0.82
MSH6-203ENST00000420813 LINC00337Q8N6G1 96 aa9.96□□□□□ -0.82
MSH6-203ENST00000420813 LINC00587B1AMM8 73 aa9.95□□□□□ -0.82
MSH6-203ENST00000420813 SPRR1AP35321 89 aa9.95□□□□□ -0.82
MSH6-203ENST00000420813 MEIG1Q5JSS6 88 aa9.95□□□□□ -0.82
MSH6-203ENST00000420813 BOD1L2Q8IYS8 172 aa9.95□□□□□ -0.82
MSH6-203ENST00000420813 DDTP30046 118 aa9.94□□□□□ -0.82
MSH6-203ENST00000420813 MIR7-3HGQ8N6C7 128 aa9.94□□□□□ -0.82
MSH6-203ENST00000420813 KCNQ1DNQ9H478 68 aa9.94□□□□□ -0.82
MSH6-203ENST00000420813 UQCR10Q9UDW1 63 aa9.94□□□□□ -0.82
MSH6-203ENST00000420813 FAT4Q6V0I7 4981 aa9.94□□□□□ -0.82
MSH6-203ENST00000420813 MUC17Q685J3 4493 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms